Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002659g0010 Nicotiana tabacum HOM05D004389 ORTHO05D005457 3.6e-97 358.2 179 100.0
Nitab4.5_0002329g0100 Nicotiana tabacum HOM05D004389 ORTHO05D005457 5.6e-90 334.3 179 93.9
Sopen12g004700 Solanum pennellii HOM05D004389 ORTHO05D005457 4.2e-85 318.2 170 94.7
Solyc12g009810.3 Solanum lycopersicum HOM05D004389 ORTHO05D005457 1.2e-84 316.6 170 93.5
PGSC0003DMG400030976 Solanum tuberosum HOM05D004389 ORTHO05D005457 1.6e-84 316.2 170 92.9
PGSC0003DMG402007838 Solanum tuberosum HOM05D004389 ORTHO05D005457 2.5e-82 308.9 170 91.8
Nitab4.5_0000401g0080 Nicotiana tabacum HOM05D004389 ORTHO05D005457 9.6e-82 307.0 170 88.8
Cc02_g33710 Coffea canephora HOM05D004389 ORTHO05D005457 1.9e-77 292.7 169 85.2
Gohir.A08G211800 Gossypium hirsutum HOM05D004389 ORTHO05D005457 1.3e-75 286.6 168 82.1
Nn8g41138 Nelumbo nucifera HOM05D004389 ORTHO05D005457 1.7e-75 286.2 169 85.2
Gorai.004G242800 Gossypium raimondii HOM05D004389 ORTHO05D005457 3.0e-75 285.4 168 81.5
COL.COLO4_29544 Corchorus olitorius HOM05D004389 ORTHO05D005457 3.3e-74 282.0 169 80.5
Thecc.05G307100 Theobroma cacao HOM05D004389 ORTHO05D005457 4.3e-74 281.6 169 81.1
Oeu045484.1 Olea europaea HOM05D004389 ORTHO05D005457 5.6e-74 281.2 179 79.3
Gohir.D08G228501 Gossypium hirsutum HOM05D004389 ORTHO05D005457 7.3e-74 280.8 168 80.4
COL.COLO4_19842 Corchorus olitorius HOM05D004389 ORTHO05D005457 9.6e-74 280.4 169 80.5
Duzib177G0146 Durio zibethinus HOM05D004389 ORTHO05D005457 9.6e-74 280.4 169 80.5
Actinidia05713 Actinidia chinensis HOM05D004389 ORTHO05D005457 1.3e-73 280.0 168 82.7
PGR031G3032 Punica granatum HOM05D004389 ORTHO05D005457 1.3e-73 280.0 169 82.2
Dinv23968 Davidia involucrata HOM05D004389 ORTHO05D005457 2.1e-73 279.3 168 82.1
SGA_v2.0_scaffold11G05813 Striga asiatica HOM05D004389 ORTHO05D005457 2.1e-73 279.3 169 81.7
SGA_v2.0_scaffold16G07733 Striga asiatica HOM05D004389 ORTHO05D005457 2.1e-73 279.3 169 82.2
Glyma.05G086900 Glycine max HOM05D004389 ORTHO05D005457 3.6e-73 278.5 169 80.5
Manes.09G078200 Manihot esculenta HOM05D004389 ORTHO05D005457 4.8e-73 278.1 169 82.2
Peaxi162Scf00523g00530 Petunia axillaris HOM05D004389 ORTHO05D005457 4.8e-73 278.1 170 84.1
Ciclev10018002m.g Citrus clementina HOM05D004389 ORTHO05D005457 6.2e-73 277.7 169 80.5
Lj7A473T46 Lonicera japonica HOM05D004389 ORTHO05D005457 6.2e-73 277.7 169 81.7
CDE02G2165 Ceratophyllum demersum HOM05D004389 ORTHO05D005457 8.1e-73 277.3 168 80.4
LjContig00312_ERROPOS870357g0027537 Lotus japonicus HOM05D004389 ORTHO05D005457 1.4e-72 276.6 169 81.1
vmacro19638 Vaccinium macrocarpon HOM05D004389 ORTHO05D005457 1.8e-72 276.2 170 81.2
CiPaw.07G015300 Carya illinoinensis HOM05D004389 ORTHO05D005457 2.4e-72 275.8 168 81.5
TAR383G0075 Trochodendron aralioides HOM05D004389 ORTHO05D005457 4.0e-72 275.0 170 82.4
Aqoxy7G01925 Aquilegia oxysepala HOM05D004389 ORTHO05D005457 9.0e-72 273.9 168 80.4
DCAR_008416 Daucus carota HOM05D004389 ORTHO05D005457 9.0e-72 273.9 169 79.9
QL03p004595 Quercus lobata HOM05D004389 ORTHO05D005457 9.0e-72 273.9 168 80.4
Haze_23899 Corylus avellana HOM05D004389 ORTHO05D005457 1.2e-71 273.5 168 81.0
Glyma.06G240600 Glycine max HOM05D004389 ORTHO05D005457 1.2e-71 273.5 170 81.2
Potri.005G036500 Populus trichocarpa HOM05D004389 ORTHO05D005457 1.2e-71 273.5 178 76.4
TAR626G0408 Trochodendron aralioides HOM05D004389 ORTHO05D005457 1.2e-71 273.5 169 82.2
Hma1.2p1_0666F.1_g199560 Hydrangea macrophylla HOM05D004389 ORTHO05D005457 1.5e-71 273.1 169 81.1
Hma1.2p1_1362F.1_g278175 Hydrangea macrophylla HOM05D004389 ORTHO05D005457 1.5e-71 273.1 169 81.1
Lj1g0012007 Lotus japonicus HOM05D004389 ORTHO05D005457 1.5e-71 273.1 169 79.9
CSS0010710 Camellia sinensis var. sinensis HOM05D004389 ORTHO05D005457 2.6e-71 272.3 175 77.7
Duzib128G0997 Durio zibethinus HOM05D004389 ORTHO05D005457 2.6e-71 272.3 169 78.7
Potri.013G025600 Populus trichocarpa HOM05D004389 ORTHO05D005457 4.5e-71 271.6 170 78.2
Haze_04228 Corylus avellana HOM05D004389 ORTHO05D005457 5.8e-71 271.2 169 81.1
Eucgr.H04472 Eucalyptus grandis HOM05D004389 ORTHO05D005457 5.8e-71 271.2 169 79.3
Medtr3g115100 Medicago truncatula HOM05D004389 ORTHO05D005457 5.8e-71 271.2 179 76.0
Lj9C683G9 Lonicera japonica HOM05D004389 ORTHO05D005457 7.6e-71 270.8 178 75.3
PSO782G4098 Papaver somniferum HOM05D004389 ORTHO05D005457 7.6e-71 270.8 169 78.7
AUR62006921 Chenopodium quinoa HOM05D004389 ORTHO05D005457 9.9e-71 270.4 171 78.4
MBI16_g00840_MAGBIO Magnolia biondii HOM05D004389 ORTHO05D005457 9.9e-71 270.4 169 76.3
Phvul.007G101500 Phaseolus vulgaris HOM05D004389 ORTHO05D005457 1.7e-70 269.6 170 81.2
TWI73G0431 Tripterygium wilfordii HOM05D004389 ORTHO05D005457 1.7e-70 269.6 169 78.1
Rhsim05G0143800 Rhododendron simsii HOM05D004389 ORTHO05D005457 2.2e-70 269.2 169 79.3
arahy.Tifrunner.gnm1.ann1.95MSG7 Arachis hypogaea HOM05D004389 ORTHO05D005457 2.9e-70 268.9 176 76.1
PSO063G2909 Papaver somniferum HOM05D004389 ORTHO05D005457 2.9e-70 268.9 169 78.7
GSVIVG01006266001 Vitis vinifera HOM05D004389 ORTHO05D005457 2.9e-70 268.9 169 78.7
CANSAT21G2311 Cannabis sativa HOM05D004389 ORTHO05D005457 4.9e-70 268.1 169 78.7
Sabra05G0037000 Salix brachista HOM05D004389 ORTHO05D005457 4.9e-70 268.1 172 77.3
CANSAT21G1920 Cannabis sativa HOM05D004389 ORTHO05D005457 6.4e-70 267.7 169 78.7
Cpa.g.sc58.76 Carica papaya HOM05D004389 ORTHO05D005457 6.4e-70 267.7 169 75.7
Sc16g0008410 Simmondsia chinensis HOM05D004389 ORTHO05D005457 1.1e-69 266.9 169 77.5
Atru.chr2.467 Acer truncatum HOM05D004389 ORTHO05D005457 1.4e-69 266.5 169 77.5
EL10Ac4g09330 Beta vulgaris HOM05D004389 ORTHO05D005457 2.4e-69 265.8 169 76.9
TPR.G33525 Trifolium pratense HOM05D004389 ORTHO05D005457 3.2e-69 265.4 169 79.3
ECA236G1487 Erigeron canadensis HOM05D004389 ORTHO05D005457 4.2e-69 265.0 179 72.6
FvH4_6g05471 Fragaria vesca HOM05D004389 ORTHO05D005457 4.2e-69 265.0 169 78.7
FAN05G0231 Fragaria x ananassa HOM05D004389 ORTHO05D005457 5.4e-69 264.6 169 78.7
FAN05G0672 Fragaria x ananassa HOM05D004389 ORTHO05D005457 5.4e-69 264.6 169 78.7
Ciclev10002655m.g Citrus clementina HOM05D004389 ORTHO05D005457 9.3e-69 263.8 169 76.9
RcHm_v2.0_Chr3g0454251 Rosa chinensis HOM05D004389 ORTHO05D005457 1.2e-68 263.5 169 78.7
Migut.N00707 Erythranthe guttata HOM05D004389 ORTHO05D005457 1.6e-68 263.1 179 73.2
AUR62000890 Chenopodium quinoa HOM05D004389 ORTHO05D005457 2.7e-68 262.3 179 73.7
AUR62005084 Chenopodium quinoa HOM05D004389 ORTHO05D005457 2.7e-68 262.3 178 73.0
CsaV3_1G039140 Cucumis sativus L. HOM05D004389 ORTHO05D005457 2.7e-68 262.3 168 78.0
FAN05G0500 Fragaria x ananassa HOM05D004389 ORTHO05D005457 2.7e-68 262.3 169 79.3
FAN05G1752 Fragaria x ananassa HOM05D004389 ORTHO05D005457 2.7e-68 262.3 169 78.7
MELO3C015339.2 Cucumis melo HOM05D004389 ORTHO05D005457 3.5e-68 261.9 168 78.0
FAN18G1342 Fragaria x ananassa HOM05D004389 ORTHO05D005457 3.5e-68 261.9 169 76.9
Cfa006553 Carpinus fangiana HOM05D004389 ORTHO05D003318 6.0e-68 261.2 163 79.8
Aa31sc17G40 Aethionema arabicum HOM05D004389 ORTHO05D005457 7.9e-68 260.8 169 76.3
Ah.04g159790 Amaranthus hybridus HOM05D004389 ORTHO05D005457 7.9e-68 260.8 169 75.7
MD04G1208300 Malus domestica HOM05D004389 ORTHO05D005457 7.9e-68 260.8 169 77.5
Prupe.6G329200 Prunus persica HOM05D004389 ORTHO05D005457 7.9e-68 260.8 169 76.3
Sed0018697 Sechium edule HOM05D004389 ORTHO05D005457 7.9e-68 260.8 167 77.2
ClCG03G016830 Citrullus lanatus HOM05D004389 ORTHO05D005457 1.0e-67 260.4 168 78.6
FAN09G0842 Fragaria x ananassa HOM05D004389 ORTHO05D005457 1.0e-67 260.4 169 78.1
FAN14G5008 Fragaria x ananassa HOM05D004389 ORTHO05D005457 1.0e-67 260.4 169 77.5
THA.LOC104805865 Tarenaya hassleriana HOM05D004389 ORTHO05D005457 1.8e-67 259.6 169 75.1
HanXRQChr14g0460141 Helianthus annuus HOM05D004389 ORTHO05D005457 5.1e-67 258.1 169 75.1
Aa31sc17G90 Aethionema arabicum HOM05D004389 ORTHO05D005457 8.7e-67 257.3 169 75.1
CSS0006579 Camellia sinensis var. sinensis HOM05D004389 ORTHO05D005457 8.7e-67 257.3 169 76.3
Medtr3g096610 Medicago truncatula HOM05D004389 ORTHO05D005457 1.1e-66 256.9 169 76.3
HPP92_010418 Vanilla planifolia HOM05D004389 ORTHO05D005457 1.9e-66 256.1 169 74.6
BcaNung00158 Brassica carinata HOM05D004389 ORTHO05D005457 3.3e-66 255.4 169 75.1
Sabra13G0026700 Salix brachista HOM05D004389 ORTHO05D005457 3.3e-66 255.4 197 68.5
BcaC09g50404 Brassica carinata HOM05D004389 ORTHO05D005457 4.3e-66 255.0 177 71.8
unitig_747.g21568 Utricularia gibba HOM05D004389 ORTHO05D005457 7.4e-66 254.2 172 73.8
A01p20570 Brassica napus HOM05D004389 ORTHO05D005457 9.6e-66 253.8 177 71.8
BolC1t02532H Brassica oleracea HOM05D004389 ORTHO05D005457 9.6e-66 253.8 177 71.2
C01p25870 Brassica napus HOM05D004389 ORTHO05D005457 1.3e-65 253.4 177 71.8
BraA01t01985Z Brassica rapa HOM05D004389 ORTHO05D005457 1.6e-65 253.1 177 71.8
Hund07052 Selenicereus undatus HOM05D004389 ORTHO05D005457 1.6e-65 253.1 183 71.0
vmacro08924 Vaccinium macrocarpon HOM05D004389 ORTHO05D005457 2.1e-65 252.7 211 64.0
Zm00001eb272600 Zea mays HOM05D004389 ORTHO05D005457 2.1e-65 252.7 167 75.4
BcaB03g14176 Brassica carinata HOM05D004389 ORTHO05D005457 4.8e-65 251.5 169 75.1
FvH4_5g27531 Fragaria vesca HOM05D004389 ORTHO05D005457 6.2e-65 251.1 161 77.6
Sp7g15350 Schrenkiella parvula HOM05D004389 ORTHO05D005457 6.2e-65 251.1 176 72.2
CARHR223240 Cardamine hirsuta HOM05D004389 ORTHO05D005457 1.1e-64 250.4 177 70.6
ATR0626G001 Amborella trichopoda HOM05D004389 ORTHO05D005457 4.0e-64 248.4 169 71.6
Carub.0007s2468 Capsella rubella HOM05D004389 ORTHO05D005457 5.3e-64 248.1 177 68.9
Zm00001eb264580 Zea mays HOM05D004389 ORTHO05D005457 9.0e-64 247.3 174 73.0
AT4G16710 Arabidopsis thaliana HOM05D004389 ORTHO05D005457 1.5e-63 246.5 177 68.9
TWI53G0891 Tripterygium wilfordii HOM05D004389 ORTHO05D005457 1.5e-63 246.5 169 71.0
AUR62000567 Chenopodium quinoa HOM05D004389 ORTHO05D005457 2.0e-63 246.1 160 76.2
Rhsim05G0010600 Rhododendron simsii HOM05D004389 ORTHO05D005457 3.8e-62 241.9 204 63.7
AL7G38020 Arabidopsis lyrata HOM05D004389 ORTHO05D005457 8.4e-62 240.7 169 70.4
Thhalv10026361m.g Eutrema salsugineum HOM05D004389 ORTHO05D005457 8.4e-62 240.7 176 69.3
GSVIVG01000019001 Vitis vinifera HOM05D004389 ORTHO05D005457 3.2e-61 238.8 146 82.2
Lsat_1_v5_gn_7_96081 Lactuca sativa HOM05D004389 ORTHO05D005457 9.3e-61 237.3 169 72.2
Psat0s2070g0160 Pisum sativum HOM05D004389 ORTHO05D005457 8.7e-59 230.7 150 77.3
Psat0s1802g0120 Pisum sativum HOM05D004389 ORTHO05D005457 2.5e-58 229.2 150 76.7
Peaxi162Scf02135g00022 Petunia axillaris HOM05D004389 ORTHO05D005457 1.6e-57 226.5 170 72.9
RcHm_v2.0_Chr7g0218901 Rosa chinensis HOM05D004389 ORTHO05D005457 6.2e-57 224.6 146 76.0
SEGI_15909 Sequoiadendron giganteum HOM05D004389 ORTHO05D005457 6.2e-57 224.6 169 65.7
HanXRQChr04g0126711 Helianthus annuus HOM05D004389 ORTHO05D005457 1.8e-56 223.0 178 66.9
Lalb_Chr05g0219701 Lupinus albus HOM05D004389 ORTHO05D005457 1.4e-53 213.4 169 65.7
Dinv40263 Davidia involucrata HOM05D004389 ORTHO05D005457 3.4e-47 192.2 120 80.8
vmacro22564 Vaccinium macrocarpon HOM05D004389 ORTHO05D005457 4.5e-47 191.8 170 61.8
AagrBONN_evm.TU.Sc2ySwM_117.3666 Anthoceros agrestis HOM05D004389 ORTHO05D005457 5.0e-46 188.3 162 56.2
Aqoxy4G02160 Aquilegia oxysepala HOM05D004389 ORTHO05D005457 1.1e-45 187.2 115 82.6
Prupe.5G030200 Prunus persica HOM05D004389 ORTHO05D005457 2.7e-44 182.6 114 82.5
AagrBONN_evm.TU.Sc2ySwM_344.4143 Anthoceros agrestis HOM05D007251 ORTHO05D009266 3.6e-44 182.2 162 54.3
CAN.G551.74 Capsicum annuum HOM05D004389 ORTHO05D005457 7.9e-44 181.0 96 94.8
Os02g0467700 Oryza sativa ssp. japonica HOM05D004389 ORTHO05D005457 1.4e-43 180.3 115 76.5
SMO171G0140 Selaginella moellendorffii HOM05D004389 ORTHO05D005457 3.0e-43 179.1 165 52.7
Mapoly0013s0083 Marchantia polymorpha HOM05D004389 ORTHO05D005457 4.3e-42 175.3 166 52.4
Pp3c11_4930 Physcomitrium patens HOM05D004389 ORTHO05D005457 2.2e-41 172.9 165 53.3
vmacro15018 Vaccinium macrocarpon HOM05D004389 ORTHO05D005457 8.5e-38 161.0 158 56.3
PRCOL_00003734 Prasinoderma coloniale HOM05D004389 ORTHO05D005457 1.4e-35 153.7 160 51.9
Cre13.g585850 Chlamydomonas reinhardtii HOM05D004389 ORTHO05D005457 2.3e-35 152.9 173 50.3
vmacro22211 Vaccinium macrocarpon HOM05D004389 ORTHO05D005457 6.7e-35 151.4 185 51.9
Ca_16978_v3 Cicer arietinum L. HOM05D004389 ORTHO05D005457 1.5e-34 150.2 86 83.7
Zm00001eb058290 Zea mays HOM05D004389 ORTHO05D005457 5.7e-34 148.3 83 84.3
CBR_g24390 Chara braunii HOM05D004389 ORTHO05D005457 9.7e-34 147.5 222 41.0
TPR.G33563 Trifolium pratense HOM05D004389 ORTHO05D005457 1.3e-33 147.1 83 84.3
Nitab4.5_0006964g0010 Nicotiana tabacum HOM05D004389 ORTHO05D005457 2.4e-32 142.9 84 83.3
MCO09G816 Micromonas commoda HOM05D004389 ORTHO05D005457 7.7e-31 137.9 162 45.7
RhsimUnG0192500 Rhododendron simsii HOM05D004389 ORTHO05D005457 2.9e-30 136.0 98 72.4
SHI18162 Sapria himalayana HOM05D004389 ORTHO05D005457 1.0e-27 127.5 138 51.4
Aqoxy5G02271 Aquilegia oxysepala HOM05D004389 ORTHO05D005457 5.7e-26 121.7 82 75.6
TPR.G30972 Trifolium pratense HOM05D004389 ORTHO05D005457 2.8e-25 119.4 84 70.2
MD15G1188200 Malus domestica HOM05D004389 ORTHO05D005457 1.4e-24 117.1 108 61.1
QL07p009462 Quercus lobata HOM05D004389 ORTHO05D005457 1.3e-22 110.5 75 72.0
FvH4_6g10990 Fragaria vesca HOM05D004389 ORTHO05D005457 4.2e-21 105.5 87 64.4
Zm00001eb380920 Zea mays HOM05D004389 ORTHO05D005457 5.5e-21 105.1 84 61.9
Actinidia39666 Actinidia chinensis HOM05D004389 ORTHO05D056204 6.1e-20 101.7 138 47.8
vmacro15154 Vaccinium macrocarpon HOM05D004389 ORTHO05D022937 2.0e-15 86.7 56 71.4
Cfa025624 Carpinus fangiana HOM05D004389 ORTHO05D125512 2.5e-13 79.7 218 32.6
SHI18161 Sapria himalayana HOM05D004389 ORTHO05D005457 1.0e-11 74.3 56 60.7
QL07p009230 Quercus lobata HOM05D004389 ORTHO05D005457 1.2e-10 70.9 85 48.2
HPP92_010328 Vanilla planifolia HOM05D004389 ORTHO05D022937 2.6e-10 69.7 42 69.0
Medtr6g452950 Medicago truncatula HOM05D029366 ORTHO05D022937 7.5e-10 68.2 45 66.7
vmacro17239 Vaccinium macrocarpon HOM05D040504 ORTHO05D426804 9.8e-10 67.8 142 33.8
CDE04G0800 Ceratophyllum demersum HOM05D000328 ORTHO05D000191 5.0e-06 55.5 37 70.3


User provided reference genes

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