Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002656g0080 Nicotiana tabacum HOM05D002327 ORTHO05D002306 1.8e-78 295.8 146 100.0
Nitab4.5_0009273g0060 Nicotiana tabacum HOM05D002327 ORTHO05D002306 1.1e-48 196.8 149 70.5
Nitab4.5_0007384g0060 Nicotiana tabacum HOM05D002327 ORTHO05D002306 1.9e-48 196.1 145 71.7
Nitab4.5_0001441g0150 Nicotiana tabacum HOM05D002327 ORTHO05D002306 2.5e-48 195.7 145 71.7
Nitab4.5_0007782g0090 Nicotiana tabacum HOM05D002327 ORTHO05D002306 3.3e-48 195.3 145 71.7
Nitab4.5_0011138g0020 Nicotiana tabacum HOM05D002327 ORTHO05D002306 3.3e-48 195.3 145 71.7
Nitab4.5_0008566g0070 Nicotiana tabacum HOM05D002327 ORTHO05D002306 6.5e-44 181.0 145 66.9
Nitab4.5_0002242g0010 Nicotiana tabacum HOM05D002327 ORTHO05D002306 3.2e-43 178.7 139 69.8
Nitab4.5_0001827g0010 Nicotiana tabacum HOM05D002327 ORTHO05D002306 5.5e-43 177.9 138 68.8
Nitab4.5_0008006g0080 Nicotiana tabacum HOM05D002327 ORTHO05D002306 5.5e-43 177.9 145 66.9
Nitab4.5_0003038g0020 Nicotiana tabacum HOM05D002327 ORTHO05D002306 1.8e-41 172.9 145 66.2
Nitab4.5_0001894g0070 Nicotiana tabacum HOM05D002327 ORTHO05D002306 1.4e-38 163.3 145 62.1
Nitab4.5_0010634g0050 Nicotiana tabacum HOM05D002327 ORTHO05D002306 3.1e-38 162.2 145 60.0
Nitab4.5_0000574g0060 Nicotiana tabacum HOM05D002327 ORTHO05D002306 1.5e-37 159.8 145 61.4
Nitab4.5_0004970g0060 Nicotiana tabacum HOM05D002327 ORTHO05D002306 2.0e-37 159.5 145 60.7
Nitab4.5_0002319g0050 Nicotiana tabacum HOM05D002327 ORTHO05D002306 1.9e-35 152.9 135 63.0
Nitab4.5_0002393g0020 Nicotiana tabacum HOM05D002327 ORTHO05D002306 2.5e-35 152.5 135 63.0
Nitab4.5_0006944g0040 Nicotiana tabacum HOM05D002327 ORTHO05D002306 2.5e-35 152.5 135 63.7
Nitab4.5_0004602g0030 Nicotiana tabacum HOM05D002327 ORTHO05D002306 9.4e-35 150.6 135 62.2
Nitab4.5_0000511g0100 Nicotiana tabacum HOM05D002327 ORTHO05D002306 6.7e-33 144.4 84 85.7
Nitab4.5_0007758g0030 Nicotiana tabacum HOM05D002327 ORTHO05D002306 5.7e-32 141.4 98 74.5
Nitab4.5_0000541g0120 Nicotiana tabacum HOM05D002327 ORTHO05D002306 2.8e-31 139.0 127 62.2
Nitab4.5_0006389g0040 Nicotiana tabacum HOM05D002327 ORTHO05D002306 1.3e-28 130.2 135 56.3
Nitab4.5_0000511g0090 Nicotiana tabacum HOM05D002327 ORTHO05D002306 1.9e-27 126.3 75 84.0
Nitab4.5_0001833g0050 Nicotiana tabacum HOM05D002327 ORTHO05D002306 7.2e-27 124.4 107 63.6
Nitab4.5_0000389g0040 Nicotiana tabacum HOM05D002327 ORTHO05D002306 5.7e-24 114.8 67 82.1
Peaxi162Scf01208g00143 Petunia axillaris HOM05D002327 ORTHO05D002306 1.8e-22 109.8 141 45.4
Nitab4.5_0004499g0060 Nicotiana tabacum HOM05D002327 ORTHO05D002306 2.4e-22 109.4 145 46.2
Nitab4.5_0004217g0040 Nicotiana tabacum HOM05D002327 ORTHO05D002306 3.4e-21 105.5 140 41.4
Nitab4.5_0002209g0250 Nicotiana tabacum HOM05D002327 ORTHO05D002306 2.2e-20 102.8 133 48.9
Peaxi162Scf00058g00613 Petunia axillaris HOM05D002327 ORTHO05D002306 5.0e-20 101.7 141 43.3
Peaxi162Scf00001g00323 Petunia axillaris HOM05D002327 ORTHO05D002306 6.5e-20 101.3 99 54.5
Peaxi162Scf00441g00415 Petunia axillaris HOM05D002327 ORTHO05D002306 6.5e-20 101.3 99 54.5
Peaxi162Scf00556g00517 Petunia axillaris HOM05D002327 ORTHO05D002306 6.5e-20 101.3 99 54.5
Nitab4.5_0003658g0110 Nicotiana tabacum HOM05D002327 ORTHO05D002306 1.9e-19 99.8 135 47.4
Nitab4.5_0028743g0010 Nicotiana tabacum HOM05D002327 ORTHO05D002306 3.2e-19 99.0 144 41.7
Nitab4.5_0001041g0070 Nicotiana tabacum HOM05D002327 ORTHO05D002306 4.2e-19 98.6 135 46.7
Peaxi162Scf00294g01116 Petunia axillaris HOM05D002327 ORTHO05D002306 4.2e-19 98.6 131 45.0
Peaxi162Scf00023g00421 Petunia axillaris HOM05D002327 ORTHO05D002306 7.2e-19 97.8 139 43.2
PGSC0003DMG400037233 Solanum tuberosum HOM05D002327 ORTHO05D002306 7.2e-19 97.8 132 43.2
Peaxi162Scf01326g00115 Petunia axillaris HOM05D002327 ORTHO05D002306 2.7e-18 95.9 135 43.0
Nitab4.5_0003537g0080 Nicotiana tabacum HOM05D002327 ORTHO05D002306 3.6e-18 95.5 127 43.3
Nitab4.5_0006131g0010 Nicotiana tabacum HOM05D002327 ORTHO05D002306 3.6e-18 95.5 99 52.5
Peaxi162Scf00519g00619 Petunia axillaris HOM05D002327 ORTHO05D002306 8.0e-18 94.4 132 43.2
Nitab4.5_0000135g0060 Nicotiana tabacum HOM05D002327 ORTHO05D002306 1.0e-17 94.0 76 61.8
Nitab4.5_0000960g0130 Nicotiana tabacum HOM05D002327 ORTHO05D002306 1.8e-17 93.2 76 59.2
Nitab4.5_0000157g0300 Nicotiana tabacum HOM05D002327 ORTHO05D002306 2.3e-17 92.8 132 42.4
Nitab4.5_0010545g0010 Nicotiana tabacum HOM05D002327 ORTHO05D002306 1.5e-16 90.1 117 45.3
PGSC0003DMG400018198 Solanum tuberosum HOM05D002327 ORTHO05D002306 1.5e-16 90.1 136 39.0
PGSC0003DMG400045585 Solanum tuberosum HOM05D002327 ORTHO05D002306 1.5e-16 90.1 140 37.9
Nitab4.5_0006281g0020 Nicotiana tabacum HOM05D002327 ORTHO05D002306 2.0e-16 89.7 109 47.7
Nitab4.5_0000699g0020 Nicotiana tabacum HOM05D002327 ORTHO05D002306 7.4e-16 87.8 76 56.6
PGSC0003DMG400037214 Solanum tuberosum HOM05D002327 ORTHO05D002306 7.4e-16 87.8 141 35.5
Nitab4.5_0000167g0320 Nicotiana tabacum HOM05D002327 ORTHO05D002306 9.7e-16 87.4 56 78.6
Peaxi162Scf00244g00139 Petunia axillaris HOM05D002327 ORTHO05D002306 1.7e-15 86.7 139 38.1
PGSC0003DMG400040732 Solanum tuberosum HOM05D002327 ORTHO05D002306 1.7e-15 86.7 140 36.4
Peaxi162Scf00179g00542 Petunia axillaris HOM05D002327 ORTHO05D002306 2.8e-15 85.9 137 40.1
PGSC0003DMG400041730 Solanum tuberosum HOM05D002327 ORTHO05D002306 1.1e-14 84.0 139 34.5
Peaxi162Scf00152g00520 Petunia axillaris HOM05D002327 ORTHO05D002306 1.4e-14 83.6 135 41.5
Peaxi162Scf00129g01342 Petunia axillaris HOM05D002327 ORTHO05D002306 1.8e-14 83.2 136 39.0
Nitab4.5_0003442g0010 Nicotiana tabacum HOM05D002327 ORTHO05D002306 2.4e-14 82.8 139 37.4
Nitab4.5_0001603g0130 Nicotiana tabacum HOM05D002327 ORTHO05D002306 4.1e-14 82.0 140 35.7
Nitab4.5_0006834g0040 Nicotiana tabacum HOM05D002327 ORTHO05D002306 7.0e-14 81.3 138 37.7
Nitab4.5_0003059g0030 Nicotiana tabacum HOM05D002327 ORTHO05D002306 9.1e-14 80.9 76 53.9
Nitab4.5_0003498g0070 Nicotiana tabacum HOM05D002327 ORTHO05D002306 9.1e-14 80.9 147 36.7
Nitab4.5_0003944g0020 Nicotiana tabacum HOM05D002327 ORTHO05D002306 1.2e-13 80.5 121 41.3
PGSC0003DMG400044885 Solanum tuberosum HOM05D002327 ORTHO05D002306 3.5e-13 79.0 132 34.1
Nitab4.5_0000108g0280 Nicotiana tabacum HOM05D002327 ORTHO05D002306 5.9e-13 78.2 140 35.7
Peaxi162Scf00096g01310 Petunia axillaris HOM05D002327 ORTHO05D002306 1.3e-12 77.0 88 47.7
Nitab4.5_0009762g0010 Nicotiana tabacum HOM05D002327 ORTHO05D002306 5.0e-12 75.1 140 33.6
Peaxi162Scf00096g01841 Petunia axillaris HOM05D002327 ORTHO05D002306 6.5e-12 74.7 134 33.6
Peaxi162Scf00531g00007 Petunia axillaris HOM05D002327 ORTHO05D002306 6.5e-12 74.7 90 50.0
Peaxi162Scf00053g00910 Petunia axillaris HOM05D002327 ORTHO05D002306 1.1e-11 73.9 144 34.7
Peaxi162Scf00248g00213 Petunia axillaris HOM05D002327 ORTHO05D002306 1.1e-11 73.9 144 34.7
Nitab4.5_0001182g0080 Nicotiana tabacum HOM05D002327 ORTHO05D002306 1.5e-11 73.6 118 39.8
Peaxi162Scf00304g00230 Petunia axillaris HOM05D002169 ORTHO05D006927 2.5e-11 72.8 143 33.6
PGSC0003DMG400038931 Solanum tuberosum HOM05D002327 ORTHO05D002306 2.5e-11 72.8 97 38.1
Nitab4.5_0005313g0060 Nicotiana tabacum HOM05D002327 ORTHO05D002306 9.4e-11 70.9 82 46.3
Nitab4.5_0000082g0030 Nicotiana tabacum HOM05D002327 ORTHO05D002306 1.6e-10 70.1 126 38.1
Nitab4.5_0004607g0050 Nicotiana tabacum HOM05D002327 ORTHO05D002306 3.6e-10 68.9 61 62.3
Peaxi162Scf00045g02132 Petunia axillaris HOM05D002327 ORTHO05D002306 6.1e-10 68.2 102 35.3
Peaxi162Scf00618g00014 Petunia axillaris HOM05D002327 ORTHO05D002306 8.0e-10 67.8 142 31.7
Peaxi162Scf00120g01533 Petunia axillaris HOM05D002327 ORTHO05D002306 1.4e-09 67.0 98 42.9
Peaxi162Scf00737g00005 Petunia axillaris HOM05D002327 ORTHO05D002306 1.8e-09 66.6 137 34.3
Nitab4.5_0007182g0030 Nicotiana tabacum HOM05D002327 ORTHO05D002306 2.3e-09 66.2 99 39.4
Dinv22755 Davidia involucrata HOM05D000824 ORTHO05D002306 5.2e-09 65.1 141 31.9
Nitab4.5_0000157g0340 Nicotiana tabacum HOM05D002327 ORTHO05D002306 5.2e-09 65.1 106 37.7
Peaxi162Scf00158g00189 Petunia axillaris HOM05D002327 ORTHO05D002306 6.7e-09 64.7 80 43.8
Peaxi162Scf00252g00819 Petunia axillaris HOM05D002327 ORTHO05D002306 6.7e-09 64.7 131 31.3
Actinidia16130 Actinidia chinensis HOM05D000824 ORTHO05D003555 2.6e-08 62.8 143 30.1
Gohir.A03G070300 Gossypium hirsutum HOM05D000824 ORTHO05D003555 4.4e-08 62.0 143 30.1
Gorai.003G101500 Gossypium raimondii HOM05D000824 ORTHO05D003555 4.4e-08 62.0 143 30.1
HanXRQChr02g0044771 Helianthus annuus HOM05D000824 ORTHO05D003555 4.4e-08 62.0 143 29.4
COL.COLO4_06851 Corchorus olitorius HOM05D000824 ORTHO05D003555 5.7e-08 61.6 143 30.8
ECA247G3309 Erigeron canadensis HOM05D000824 ORTHO05D003555 7.5e-08 61.2 143 28.7
HanXRQChr16g0517661 Helianthus annuus HOM05D000824 ORTHO05D003555 7.5e-08 61.2 143 28.7
Nitab4.5_0000965g0020 Nicotiana tabacum HOM05D002327 ORTHO05D002306 7.5e-08 61.2 121 35.5
Nitab4.5_0002901g0030 Nicotiana tabacum HOM05D002327 ORTHO05D002306 7.5e-08 61.2 66 48.5
PGSC0003DMG400044024 Solanum tuberosum HOM05D002327 ORTHO05D002306 7.5e-08 61.2 116 31.0
Atru.chr9.564 Acer truncatum HOM05D000824 ORTHO05D003555 9.7e-08 60.8 143 30.1
Ciclev10019317m.g Citrus clementina HOM05D000824 ORTHO05D003555 9.7e-08 60.8 143 30.8
Dinv10762 Davidia involucrata HOM05D002327 ORTHO05D002306 9.7e-08 60.8 141 31.2
Gohir.D03G096700 Gossypium hirsutum HOM05D000824 ORTHO05D003555 9.7e-08 60.8 143 29.4
Lj9C471T8 Lonicera japonica HOM05D000824 ORTHO05D003555 9.7e-08 60.8 144 28.5
Nitab4.5_0001485g0110 Nicotiana tabacum HOM05D000824 ORTHO05D003555 9.7e-08 60.8 143 30.1
Nitab4.5_0009401g0060 Nicotiana tabacum HOM05D000824 ORTHO05D003555 9.7e-08 60.8 143 30.1
Sc04g0004360 Simmondsia chinensis HOM05D000824 ORTHO05D003555 9.7e-08 60.8 143 30.1
MSTRG.11337 Avicennia marina HOM05D000824 ORTHO05D003555 1.3e-07 60.5 143 30.1
THA.LOC104804633 Tarenaya hassleriana HOM05D000824 ORTHO05D003555 1.3e-07 60.5 143 29.4
Nitab4.5_0027050g0010 Nicotiana tabacum HOM05D002327 ORTHO05D002306 1.7e-07 60.1 89 40.4
AUR62008537 Chenopodium quinoa HOM05D000824 ORTHO05D003555 2.2e-07 59.7 143 28.0
Ca_21770_v3 Cicer arietinum L. HOM05D000824 ORTHO05D003555 2.2e-07 59.7 143 29.4
Manes.06G084200 Manihot esculenta HOM05D000824 ORTHO05D003555 2.2e-07 59.7 143 30.1
Sopen03g034120 Solanum pennellii HOM05D000824 ORTHO05D003555 2.2e-07 59.7 143 29.4
Dinv11468 Davidia involucrata HOM05D002327 ORTHO05D002306 2.8e-07 59.3 141 29.8
Hma1.2p1_0060F.1_g033050 Hydrangea macrophylla HOM05D000824 ORTHO05D003555 2.8e-07 59.3 143 30.1
Hund09917 Selenicereus undatus HOM05D000824 ORTHO05D003555 2.8e-07 59.3 143 30.1
Ah.11g047720 Amaranthus hybridus HOM05D000824 ORTHO05D003555 3.7e-07 58.9 145 28.3
Duzib084G0695 Durio zibethinus HOM05D000824 ORTHO05D003555 3.7e-07 58.9 143 30.1
Dinv26272 Davidia involucrata HOM05D000824 ORTHO05D002306 4.8e-07 58.5 137 29.9
Peaxi162Scf00084g01020 Petunia axillaris HOM05D002327 ORTHO05D002306 4.8e-07 58.5 92 38.0
Prupe.5G205700 Prunus persica HOM05D000824 ORTHO05D003555 4.8e-07 58.5 143 28.0
RcHm_v2.0_Chr7g0183161 Rosa chinensis HOM05D000824 ORTHO05D003555 4.8e-07 58.5 143 26.6
AUR62021554 Chenopodium quinoa HOM05D000824 ORTHO05D003555 6.3e-07 58.2 143 27.3
SGA_v2.0_scaffold28G11745 Striga asiatica HOM05D000824 ORTHO05D003555 6.3e-07 58.2 143 28.7
Cc00_g07660 Coffea canephora HOM05D000824 ORTHO05D003555 8.2e-07 57.8 143 29.4
GSVIVG01007849001 Vitis vinifera HOM05D000824 ORTHO05D003555 8.2e-07 57.8 143 27.3
Ah.02g114080 Amaranthus hybridus HOM05D000824 ORTHO05D003555 1.1e-06 57.4 145 28.3
Peaxi162Scf00132g00236 Petunia axillaris HOM05D002327 ORTHO05D002306 1.1e-06 57.4 94 34.0
Thecc.03G102500 Theobroma cacao HOM05D000824 ORTHO05D003555 1.1e-06 57.4 143 29.4
HPP92_014050 Vanilla planifolia HOM05D000824 ORTHO05D003555 1.1e-06 57.4 143 28.7
Nitab4.5_0011344g0020 Nicotiana tabacum HOM05D002327 ORTHO05D002306 1.8e-06 56.6 138 30.4
Medtr0030s0160 Medicago truncatula HOM05D002327 ORTHO05D002306 2.4e-06 56.2 99 34.3
Peaxi162Scf00401g00528 Petunia axillaris HOM05D002327 ORTHO05D002306 2.4e-06 56.2 94 34.0
CANSAT80G1236 Cannabis sativa HOM05D000824 ORTHO05D003555 3.1e-06 55.8 143 28.0
Peaxi162Scf00972g00027 Petunia axillaris HOM05D002327 ORTHO05D002306 3.1e-06 55.8 97 38.1
TWI81G1098 Tripterygium wilfordii HOM05D000824 ORTHO05D003555 3.1e-06 55.8 143 28.0
Nitab4.5_0005037g0020 Nicotiana tabacum HOM05D002327 ORTHO05D002306 4.1e-06 55.5 93 40.9
EL10Ac5g11138 Beta vulgaris HOM05D000824 ORTHO05D003555 7.0e-06 54.7 143 28.0


User provided reference genes

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