Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002651g0060 Nicotiana tabacum HOM05D006721 ORTHO05D000476 1.6e-71 272.7 140 100.0
Nitab4.5_0000930g0080 Nicotiana tabacum HOM05D006721 ORTHO05D000476 3.6e-52 208.4 136 83.8
CAN.G186.72 Capsicum annuum HOM05D006721 ORTHO05D000476 3.1e-43 178.7 138 76.1
Peaxi162Scf00135g00914 Petunia axillaris HOM05D006721 ORTHO05D000476 2.2e-41 172.6 121 81.0
PGSC0003DMG400025428 Solanum tuberosum HOM05D006721 ORTHO05D000476 3.0e-38 162.2 125 74.4
Sopen04g004980 Solanum pennellii HOM05D006721 ORTHO05D000476 3.3e-37 158.7 125 72.0
Ciclev10022930m.g Citrus clementina HOM05D006721 ORTHO05D000476 1.2e-34 150.2 114 71.1
HanXRQChr11g0322821 Helianthus annuus HOM05D006721 ORTHO05D000476 1.5e-34 149.8 109 75.2
Actinidia38949 Actinidia chinensis HOM05D006721 ORTHO05D000476 7.6e-34 147.5 121 67.8
Cpa.g.sc162.11 Carica papaya HOM05D006721 ORTHO05D000476 3.8e-33 145.2 113 68.1
CiPaw.07G077700 Carya illinoinensis HOM05D006721 ORTHO05D000476 3.8e-33 145.2 102 74.5
Cc02_g09090 Coffea canephora HOM05D006721 ORTHO05D000476 3.8e-33 145.2 110 70.0
Dinv14631 Davidia involucrata HOM05D006721 ORTHO05D000476 4.9e-33 144.8 122 65.6
QL01p041965 Quercus lobata HOM05D006721 ORTHO05D000476 4.9e-33 144.8 113 71.7
Atru.chr2.886 Acer truncatum HOM05D006721 ORTHO05D000476 6.4e-33 144.4 111 70.3
Haze_04466 Corylus avellana HOM05D006721 ORTHO05D000476 6.4e-33 144.4 114 70.2
COL.COLO4_15417 Corchorus olitorius HOM05D006721 ORTHO05D000476 8.4e-33 144.1 112 69.6
CSS0047325 Camellia sinensis var. sinensis HOM05D006721 ORTHO05D000476 1.4e-32 143.3 109 71.6
Dinv18276 Davidia involucrata HOM05D006721 ORTHO05D000476 1.4e-32 143.3 109 70.6
Manes.09G149900 Manihot esculenta HOM05D006721 ORTHO05D000476 1.4e-32 143.3 112 67.9
Lsat_1_v5_gn_2_107641 Lactuca sativa HOM05D006721 ORTHO05D000476 2.4e-32 142.5 111 70.3
PGR142G1199 Punica granatum HOM05D006721 ORTHO05D000476 2.4e-32 142.5 121 65.3
GSVIVG01036217001 Vitis vinifera HOM05D006721 ORTHO05D000476 2.4e-32 142.5 111 69.4
Nn1g02669 Nelumbo nucifera HOM05D006721 ORTHO05D000476 3.2e-32 142.1 109 70.6
QL03p032184 Quercus lobata HOM05D006721 ORTHO05D000476 3.2e-32 142.1 113 70.8
QL03p032281 Quercus lobata HOM05D006721 ORTHO05D000476 3.2e-32 142.1 113 70.8
Migut.F00814 Erythranthe guttata HOM05D006721 ORTHO05D000476 4.2e-32 141.7 120 68.3
Oeu058331.1 Olea europaea HOM05D006721 ORTHO05D000476 4.2e-32 141.7 109 68.8
Actinidia34741 Actinidia chinensis HOM05D006721 ORTHO05D000476 5.4e-32 141.4 109 71.6
TAR365G0041 Trochodendron aralioides HOM05D006721 ORTHO05D000476 9.3e-32 140.6 120 66.7
Carub.0003s2825 Capsella rubella HOM05D006721 ORTHO05D000476 1.2e-31 140.2 112 67.9
Eucgr.B02129 Eucalyptus grandis HOM05D006721 ORTHO05D000476 2.1e-31 139.4 112 67.0
MSTRG.9005 Avicennia marina HOM05D006721 ORTHO05D000476 2.7e-31 139.0 117 65.8
Sabra19G0016300 Salix brachista HOM05D006721 ORTHO05D000476 2.7e-31 139.0 112 67.0
Sabra19G0026800 Salix brachista HOM05D006721 ORTHO05D000476 2.7e-31 139.0 112 67.0
Gohir.A13G168900 Gossypium hirsutum HOM05D006721 ORTHO05D000476 3.5e-31 138.7 116 64.7
Gohir.D13G174300 Gossypium hirsutum HOM05D006721 ORTHO05D000476 3.5e-31 138.7 116 64.7
Gorai.013G186500 Gossypium raimondii HOM05D006721 ORTHO05D000476 3.5e-31 138.7 116 64.7
ECA238G3797 Erigeron canadensis HOM05D006721 ORTHO05D000476 6.0e-31 137.9 109 68.8
Potri.019G014100 Populus trichocarpa HOM05D006721 ORTHO05D000476 6.0e-31 137.9 112 67.0
SGA_v2.0_scaffold90G27702 Striga asiatica HOM05D006721 ORTHO05D000476 6.0e-31 137.9 119 63.9
vmacro10349 Vaccinium macrocarpon HOM05D006721 ORTHO05D000476 6.0e-31 137.9 123 62.6
Prupe.6G347400 Prunus persica HOM05D006721 ORTHO05D000476 7.9e-31 137.5 123 65.9
Sp3g27300 Schrenkiella parvula HOM05D006721 ORTHO05D000476 1.3e-30 136.7 112 67.0
BraA03t13647Z Brassica rapa HOM05D006721 ORTHO05D000476 1.8e-30 136.3 115 65.2
Cfa006323 Carpinus fangiana HOM05D006721 ORTHO05D000476 1.8e-30 136.3 96 74.0
Thhalv10023143m.g Eutrema salsugineum HOM05D006721 ORTHO05D000476 1.8e-30 136.3 121 62.0
RcHm_v2.0_Chr3g0450141 Rosa chinensis HOM05D006721 ORTHO05D000476 1.8e-30 136.3 112 67.0
THA.LOC104808031 Tarenaya hassleriana HOM05D006721 ORTHO05D000476 1.8e-30 136.3 117 62.4
HPP92_000759 Vanilla planifolia HOM05D006721 ORTHO05D000476 3.9e-30 135.2 103 68.0
A03p45120 Brassica napus HOM05D006721 ORTHO05D000476 5.1e-30 134.8 113 66.4
TWI56G0396 Tripterygium wilfordii HOM05D006721 ORTHO05D000476 6.7e-30 134.4 120 61.7
Aa31LG8G12480 Aethionema arabicum HOM05D006721 ORTHO05D000476 8.7e-30 134.0 127 59.8
FAN05G3615 Fragaria x ananassa HOM05D004756 ORTHO05D005793 8.7e-30 134.0 130 60.0
Thecc.05G276800 Theobroma cacao HOM05D006721 ORTHO05D000476 8.7e-30 134.0 112 66.1
Aqoxy2G03596 Aquilegia oxysepala HOM05D006721 ORTHO05D000476 1.5e-29 133.3 120 64.2
BcaC01g03109 Brassica carinata HOM05D006721 ORTHO05D000476 1.5e-29 133.3 98 72.4
BolC3t17881H Brassica oleracea HOM05D006721 ORTHO05D000476 1.5e-29 133.3 98 72.4
CARHR104660 Cardamine hirsuta HOM05D006721 ORTHO05D000476 1.5e-29 133.3 112 64.3
Lj1g0023872 Lotus japonicus HOM05D006721 ORTHO05D000476 1.5e-29 133.3 114 65.8
EL10Ac4g09049 Beta vulgaris HOM05D006721 ORTHO05D000476 2.5e-29 132.5 109 64.2
CsaV3_2G003760 Cucumis sativus L. HOM05D006721 ORTHO05D000476 2.5e-29 132.5 120 59.2
AT2G14045 Arabidopsis thaliana HOM05D006721 ORTHO05D000476 3.3e-29 132.1 112 64.3
FAN02G4370 Fragaria x ananassa HOM05D006721 ORTHO05D000476 3.3e-29 132.1 128 60.9
C03p55970 Brassica napus HOM05D006721 ORTHO05D000476 4.3e-29 131.7 96 74.0
FvH4_6g02371 Fragaria vesca HOM05D006721 ORTHO05D000476 4.3e-29 131.7 127 60.6
FAN05G5208 Fragaria x ananassa HOM05D006721 ORTHO05D000476 4.3e-29 131.7 127 60.6
FAN14G0694 Fragaria x ananassa HOM05D004756 ORTHO05D005793 4.3e-29 131.7 127 60.6
Glyma.03G251900 Glycine max HOM05D006721 ORTHO05D000476 4.3e-29 131.7 114 63.2
Gohir.D12G180151 Gossypium hirsutum HOM05D006721 ORTHO05D000476 4.3e-29 131.7 113 65.5
Lalb_Chr04g0262001 Lupinus albus HOM05D006721 ORTHO05D000476 4.3e-29 131.7 121 62.0
Psat3g006080 Pisum sativum HOM05D006721 ORTHO05D000476 4.3e-29 131.7 118 61.9
Gorai.008G193300 Gossypium raimondii HOM05D006721 ORTHO05D000476 5.6e-29 131.3 113 64.6
Phvul.006G106600 Phaseolus vulgaris HOM05D006721 ORTHO05D000476 7.4e-29 131.0 114 64.0
FAN14G4094 Fragaria x ananassa HOM05D004756 ORTHO05D005793 9.6e-29 130.6 126 61.1
Medtr7g116300 Medicago truncatula HOM05D006721 ORTHO05D000476 9.6e-29 130.6 124 60.5
TPR.G6950 Trifolium pratense HOM05D006721 ORTHO05D000476 9.6e-29 130.6 118 61.9
Ah.04g163750 Amaranthus hybridus HOM05D006721 ORTHO05D000476 1.3e-28 130.2 120 61.7
Sed0018278 Sechium edule HOM05D006721 ORTHO05D000476 1.3e-28 130.2 122 58.2
MD12G1244800 Malus domestica HOM05D006721 ORTHO05D000476 1.6e-28 129.8 129 59.7
AUR62001066 Chenopodium quinoa HOM05D006721 ORTHO05D000476 3.6e-28 128.6 109 62.4
PSO210G7245 Papaver somniferum HOM05D006721 ORTHO05D000476 3.6e-28 128.6 106 67.9
Os07g0185800 Oryza sativa ssp. japonica HOM05D006721 ORTHO05D000476 4.8e-28 128.3 102 64.7
Hund06940 Selenicereus undatus HOM05D006721 ORTHO05D000476 4.8e-28 128.3 109 61.5
PSO832G0589 Papaver somniferum HOM05D006721 ORTHO05D000476 6.2e-28 127.9 121 62.0
ATR0665G282 Amborella trichopoda HOM05D006721 ORTHO05D000476 8.1e-28 127.5 117 60.7
CDE06G1546 Ceratophyllum demersum HOM05D006721 ORTHO05D000476 8.1e-28 127.5 102 65.7
Zm00001eb301780 Zea mays HOM05D006721 ORTHO05D000476 8.1e-28 127.5 105 63.8
Sc15g0002500 Simmondsia chinensis HOM05D006721 ORTHO05D000476 1.1e-27 127.1 94 71.3
CANSAT54G3036 Cannabis sativa HOM05D006721 ORTHO05D000476 1.4e-27 126.7 104 62.5
MBI19_g37090_MAGBIO Magnolia biondii HOM05D006721 ORTHO05D000476 1.4e-27 126.7 124 60.5
Rhsim09G0138600 Rhododendron simsii HOM05D006721 ORTHO05D000476 1.2e-26 123.6 169 47.9
AUR62004887 Chenopodium quinoa HOM05D006721 ORTHO05D000476 2.0e-26 122.9 128 55.5
GSVIVG01014622001 Vitis vinifera HOM05D006721 ORTHO05D000476 2.0e-26 122.9 93 69.9
AL3G45710 Arabidopsis lyrata HOM05D006721 ORTHO05D000476 2.6e-26 122.5 123 57.7
GSVIVG01015127001 Vitis vinifera HOM05D006721 ORTHO05D000476 1.3e-25 120.2 94 69.1
Ca_09468_v3 Cicer arietinum L. HOM05D006721 ORTHO05D000476 1.9e-24 116.3 118 57.6
Duzib128G0372 Durio zibethinus HOM05D006721 ORTHO05D000476 1.5e-21 106.7 125 55.2
DCAR_030975 Daucus carota HOM05D006889 ORTHO05D008614 1.3e-20 103.6 112 51.8
Mapoly0013s0055 Marchantia polymorpha HOM05D006721 ORTHO05D000476 4.8e-20 101.7 96 56.2
Pp3c7_11510 Physcomitrium patens HOM05D006721 ORTHO05D000476 6.2e-20 101.3 104 49.0
SMO367G0192 Selaginella moellendorffii HOM05D001348 ORTHO05D002788 2.4e-19 99.4 97 55.7
MELO3C004419.2 Cucumis melo HOM05D006721 ORTHO05D000476 4.5e-18 95.1 70 65.7
BraA09t38027Z Brassica rapa HOM05D006721 ORTHO05D000476 1.7e-17 93.2 94 57.4
BraA10t43135Z Brassica rapa HOM05D006721 ORTHO05D000476 1.7e-17 93.2 94 57.4
A07p07050 Brassica napus HOM05D006721 ORTHO05D000476 3.8e-17 92.0 96 56.2
BraA06t26268Z Brassica rapa HOM05D006721 ORTHO05D000476 1.4e-16 90.1 95 56.8
ClCG02G016980 Citrullus lanatus HOM05D006721 ORTHO05D000476 7.1e-16 87.8 68 63.2
arahy.Tifrunner.gnm1.ann1.DA1MAK Arachis hypogaea HOM05D006721 ORTHO05D000476 4.6e-15 85.1 85 55.3
arahy.Tifrunner.gnm1.ann1.P0L55B Arachis hypogaea HOM05D006721 ORTHO05D000476 4.6e-15 85.1 85 55.3
A09p24350 Brassica napus HOM05D006721 ORTHO05D000476 7.9e-15 84.3 59 71.2
A01p30750 Brassica napus HOM05D001035 ORTHO05D000476 3.9e-14 82.0 59 69.5
BcaB06g29605 Brassica carinata HOM05D001035 ORTHO05D021752 1.1e-13 80.5 59 66.1
Zm00001eb112450 Zea mays HOM05D006721 ORTHO05D000476 7.4e-13 77.8 51 68.6
FAN09G4219 Fragaria x ananassa HOM05D006721 ORTHO05D000476 1.3e-12 77.0 107 43.0
MCO10G233 Micromonas commoda HOM05D006721 ORTHO05D000476 2.1e-12 76.3 92 46.7
CBR_g51472 Chara braunii HOM05D006721 ORTHO05D000476 4.8e-12 75.1 99 41.4
C07p11900 Brassica napus HOM05D006721 ORTHO05D000476 1.1e-11 73.9 87 56.3
Cre02.g105950 Chlamydomonas reinhardtii HOM05D006721 ORTHO05D000476 2.0e-10 69.7 102 42.2
BolC7t41661H Brassica oleracea HOM05D006721 ORTHO05D000476 4.5e-10 68.6 90 53.3
PRCOL_00003504 Prasinoderma coloniale HOM05D006721 ORTHO05D000476 5.9e-10 68.2 76 47.4
A05p09770 Brassica napus HOM05D006721 ORTHO05D000476 1.0e-09 67.4 56 62.5
DCAR_030976 Daucus carota HOM05D006721 ORTHO05D000476 5.5e-08 61.6 52 59.6
A09p05680 Brassica napus HOM05D006721 ORTHO05D000476 6.7e-06 54.7 29 86.2


User provided reference genes

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