Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002651g0040 Nicotiana tabacum HOM05D006889 ORTHO05D008614 2.4e-169 599.0 349 100.0
Nitab4.5_0000930g0060 Nicotiana tabacum HOM05D006889 ORTHO05D008614 4.5e-144 515.0 351 89.2
Sopen04g004970 Solanum pennellii HOM05D006889 ORTHO05D008614 3.4e-123 445.7 361 78.4
Solyc04g009830.3 Solanum lycopersicum HOM05D006889 ORTHO05D008614 5.7e-123 444.9 361 77.3
Peaxi162Scf00135g00913 Petunia axillaris HOM05D006889 ORTHO05D008614 8.6e-119 431.0 301 85.7
PGSC0003DMG400025437 Solanum tuberosum HOM05D006889 ORTHO05D008614 1.2e-117 427.2 380 72.9
CAN.G186.71 Capsicum annuum HOM05D006889 ORTHO05D008614 9.8e-107 391.0 348 69.3
Migut.F00816 Erythranthe guttata HOM05D006889 ORTHO05D008614 1.7e-95 353.6 351 59.3
QL09p026702 Quercus lobata HOM05D006889 ORTHO05D008614 5.6e-94 348.6 362 63.3
Dinv25463 Davidia involucrata HOM05D006889 ORTHO05D008614 4.7e-93 345.5 370 58.4
Haze_22241 Corylus avellana HOM05D006889 ORTHO05D008614 6.8e-92 341.7 345 65.8
Atru.chr12.2063 Acer truncatum HOM05D006889 ORTHO05D008614 1.2e-91 340.9 352 63.4
Cc02_g09110 Coffea canephora HOM05D006889 ORTHO05D008614 4.4e-91 339.0 354 61.0
Gorai.010G175600 Gossypium raimondii HOM05D006889 ORTHO05D008614 4.4e-91 339.0 365 60.3
SalBow3G4178 Salvia bowleyana HOM05D006889 ORTHO05D008614 4.4e-91 339.0 370 61.1
Gohir.A06G144633 Gossypium hirsutum HOM05D006889 ORTHO05D008614 1.7e-90 337.0 366 60.1
PSO384G0326 Papaver somniferum HOM05D006889 ORTHO05D008614 6.4e-90 335.1 371 57.7
RcHm_v2.0_Chr1g0383401 Rosa chinensis HOM05D006889 ORTHO05D008614 6.4e-90 335.1 364 58.2
CSS0010313 Camellia sinensis var. sinensis HOM05D006889 ORTHO05D008614 1.1e-89 334.3 330 60.9
TAR369G0178 Trochodendron aralioides HOM05D006889 ORTHO05D008614 1.1e-89 334.3 360 58.9
Manes.09G119000 Manihot esculenta HOM05D006889 ORTHO05D008614 2.4e-89 333.2 359 59.9
Aqoxy4G02722 Aquilegia oxysepala HOM05D006889 ORTHO05D008614 5.4e-89 332.0 361 59.8
Oeu033252.2 Olea europaea HOM05D006889 ORTHO05D008614 5.4e-89 332.0 392 55.4
Ciclev10012044m.g Citrus clementina HOM05D006889 ORTHO05D008614 9.2e-89 331.3 349 62.8
ECA238G0057 Erigeron canadensis HOM05D006889 ORTHO05D008614 2.7e-88 329.7 375 61.1
Nn6g34807 Nelumbo nucifera HOM05D006889 ORTHO05D008614 4.6e-88 328.9 377 59.4
Cpa.g.sc140.53 Carica papaya HOM05D006889 ORTHO05D008614 2.3e-87 326.6 355 61.1
Lalb_Chr13g0293181 Lupinus albus HOM05D006889 ORTHO05D008614 3.0e-87 326.2 367 58.0
Thecc.06G017600 Theobroma cacao HOM05D006889 ORTHO05D008614 3.9e-87 325.9 355 60.3
FAN03G0535 Fragaria x ananassa HOM05D006889 ORTHO05D008614 8.6e-87 324.7 356 57.3
FAN10G2743 Fragaria x ananassa HOM05D006889 ORTHO05D008614 1.5e-86 323.9 355 57.2
Potri.001G412800 Populus trichocarpa HOM05D006889 ORTHO05D008614 1.9e-86 323.6 359 60.2
Prupe.2G323000 Prunus persica HOM05D006889 ORTHO05D008614 1.9e-86 323.6 359 56.5
FAN10G1689 Fragaria x ananassa HOM05D006889 ORTHO05D008614 3.3e-86 322.8 355 56.9
FvH4_7g33430 Fragaria vesca HOM05D006889 ORTHO05D008614 5.6e-86 322.0 355 58.0
THA.LOC104805469 Tarenaya hassleriana HOM05D006889 ORTHO05D008614 5.6e-86 322.0 358 61.5
GSVIVG01024467001 Vitis vinifera HOM05D006889 ORTHO05D008614 5.6e-86 322.0 349 59.9
SGA_v2.0_scaffold62G21307 Striga asiatica HOM05D006889 ORTHO05D008614 8.1e-85 318.2 384 54.9
Sabra16G0274900 Salix brachista HOM05D006889 ORTHO05D008614 1.4e-84 317.4 372 56.7
PSO339G0304 Papaver somniferum HOM05D006889 ORTHO05D008614 4.0e-84 315.8 371 55.8
MBI14_g11688_MAGBIO Magnolia biondii HOM05D006889 ORTHO05D008614 9.0e-84 314.7 368 59.8
vmacro10779 Vaccinium macrocarpon HOM05D006889 ORTHO05D008614 3.4e-83 312.8 351 63.8
Eucgr.K00107 Eucalyptus grandis HOM05D006889 ORTHO05D008614 4.4e-83 312.4 359 55.7
HanXRQChr07g0200571 Helianthus annuus HOM05D006889 ORTHO05D008614 5.8e-83 312.0 381 56.7
Actinidia31405 Actinidia chinensis HOM05D006889 ORTHO05D008614 3.8e-82 309.3 296 67.6
Lj4g0013326 Lotus japonicus HOM05D006889 ORTHO05D008614 4.9e-82 308.9 371 54.7
CDE08G0956 Ceratophyllum demersum HOM05D006889 ORTHO05D008614 1.4e-81 307.4 355 56.9
unitig_747.g21800 Utricularia gibba HOM05D006889 ORTHO05D008614 1.4e-81 307.4 345 62.6
Carub.0004s1859 Capsella rubella HOM05D006889 ORTHO05D008614 9.3e-81 304.7 366 53.0
CiPaw.07G182100 Carya illinoinensis HOM05D006889 ORTHO05D008614 1.2e-80 304.3 340 63.2
Aa31LG5G21960 Aethionema arabicum HOM05D006889 ORTHO05D008614 3.9e-79 299.3 370 52.7
Phvul.002G186100 Phaseolus vulgaris HOM05D006889 ORTHO05D008614 5.1e-79 298.9 346 56.6
FAN01G0055 Fragaria x ananassa HOM05D006889 ORTHO05D008614 1.9e-78 297.0 336 55.4
Hma1.2p1_0164F.1_g073300 Hydrangea macrophylla HOM05D006889 ORTHO05D008614 7.3e-78 295.0 295 62.0
AT2G36740 Arabidopsis thaliana HOM05D006889 ORTHO05D008614 1.6e-77 293.9 372 51.1
AL4G32960 Arabidopsis lyrata HOM05D006889 ORTHO05D008614 6.2e-77 292.0 366 52.2
Sabra16G0274600 Salix brachista HOM05D006889 ORTHO05D008614 1.1e-76 291.2 391 52.9
CsaV3_5G005080 Cucumis sativus L. HOM05D006889 ORTHO05D008614 2.4e-76 290.0 356 57.6
BcaC02g11793 Brassica carinata HOM05D006889 ORTHO05D008614 9.0e-76 288.1 361 53.2
BolC4t22767H Brassica oleracea HOM05D006889 ORTHO05D008614 9.0e-76 288.1 361 53.2
BolC4t22783H Brassica oleracea HOM05D006889 ORTHO05D008614 9.0e-76 288.1 361 52.9
BraA05t19868Z Brassica rapa HOM05D006889 ORTHO05D008614 3.4e-75 286.2 349 54.7
Ca_18207_v3 Cicer arietinum L. HOM05D006889 ORTHO05D008614 5.8e-75 285.4 365 53.7
A05p09120 Brassica napus HOM05D006889 ORTHO05D008614 7.6e-75 285.0 349 54.7
C04p11290 Brassica napus HOM05D006889 ORTHO05D008614 9.9e-75 284.6 361 52.6
Glyma.05G136000 Glycine max HOM05D006889 ORTHO05D008614 9.9e-75 284.6 349 55.6
HPP92_000052 Vanilla planifolia HOM05D006889 ORTHO05D008614 1.3e-74 284.3 345 56.5
TWI60G1635 Tripterygium wilfordii HOM05D006889 ORTHO05D008614 8.4e-74 281.6 354 50.6
MSTRG.4328 Avicennia marina HOM05D006889 ORTHO05D008614 4.6e-72 275.8 342 56.7
ATR0081G022 Amborella trichopoda HOM05D006889 ORTHO05D008614 1.5e-70 270.8 295 63.1
EL10Ac8g18884 Beta vulgaris HOM05D006889 ORTHO05D008614 1.5e-70 270.8 403 51.4
Psat7g087400 Pisum sativum HOM05D006889 ORTHO05D008614 1.5e-70 270.8 372 53.0
Os08g0192400 Oryza sativa ssp. japonica HOM05D006889 ORTHO05D008614 2.5e-70 270.0 364 54.1
arahy.Tifrunner.gnm1.ann1.T52I9D Arachis hypogaea HOM05D006889 ORTHO05D008614 9.6e-70 268.1 373 54.4
Sed0014561 Sechium edule HOM05D006889 ORTHO05D008614 2.8e-69 266.5 356 52.8
Hund18033 Selenicereus undatus HOM05D006889 ORTHO05D008614 2.8e-69 266.5 368 51.9
Lsat_1_v5_gn_2_107601 Lactuca sativa HOM05D006889 ORTHO05D008614 3.1e-68 263.1 336 55.7
BcaB02g09334 Brassica carinata HOM05D006889 ORTHO05D008614 9.0e-68 261.5 354 50.0
MD07G1075300 Malus domestica HOM05D006889 ORTHO05D008614 1.5e-67 260.8 374 48.9
MD07G1304400 Malus domestica HOM05D006889 ORTHO05D008614 2.6e-67 260.0 360 50.3
arahy.Tifrunner.gnm1.ann1.I4BD9U Arachis hypogaea HOM05D006889 ORTHO05D008614 1.7e-66 257.3 402 50.7
Gohir.D06G150400 Gossypium hirsutum HOM05D006889 ORTHO05D008614 2.9e-66 256.5 279 57.0
Sc08g0005450 Simmondsia chinensis HOM05D006889 ORTHO05D008614 2.3e-63 246.9 296 56.4
MELO3C005447.2 Cucumis melo HOM05D006889 ORTHO05D008614 6.2e-61 238.8 242 69.0
Sp4g19020 Schrenkiella parvula HOM05D006889 ORTHO05D008614 2.4e-60 236.9 362 45.6
Zm00001eb260210 Zea mays HOM05D006889 ORTHO05D008614 2.4e-60 236.9 348 46.6
Ah.14g084260 Amaranthus hybridus HOM05D006889 ORTHO05D008614 3.4e-59 233.0 353 47.0
Thhalv10016833m.g Eutrema salsugineum HOM05D006889 ORTHO05D008614 4.9e-58 229.2 366 45.4
PGR142G0052 Punica granatum HOM05D006889 ORTHO05D008614 2.1e-56 223.8 357 48.2
CARHR131100 Cardamine hirsuta HOM05D006889 ORTHO05D008614 5.1e-55 219.2 367 45.0
AUR62039766 Chenopodium quinoa HOM05D006889 ORTHO05D008614 5.1e-55 219.2 257 64.2
Rhsim09G0213900 Rhododendron simsii HOM05D006889 ORTHO05D008614 6.9e-52 208.8 368 45.1
Rhsim01G0067600 Rhododendron simsii HOM05D006889 ORTHO05D008614 1.2e-51 208.0 361 45.2
TPR.G11931 Trifolium pratense HOM05D006889 ORTHO05D008614 5.9e-51 205.7 346 48.0
SMO165G0047 Selaginella moellendorffii HOM05D006889 ORTHO05D008614 7.9e-48 195.3 330 45.5
DCAR_030975 Daucus carota HOM05D006889 ORTHO05D008614 6.7e-47 192.2 331 41.7
Pp3c14_17650 Physcomitrium patens HOM05D006889 ORTHO05D008614 9.1e-44 181.8 355 45.9
SEGI_10499 Sequoiadendron giganteum HOM05D006889 ORTHO05D008614 3.8e-42 176.4 260 51.9
Gohir.D08G083500 Gossypium hirsutum HOM05D006889 ORTHO05D008614 8.8e-39 165.2 169 58.6
AUR62028393 Chenopodium quinoa HOM05D006889 ORTHO05D008614 3.1e-36 156.8 396 39.9
Gorai.004G087700 Gossypium raimondii HOM05D006889 ORTHO05D008614 5.3e-36 156.0 192 52.6
COL.COLO4_31129 Corchorus olitorius HOM05D000112 ORTHO05D000564 1.2e-35 154.8 306 43.5
Mapoly0001s0482 Marchantia polymorpha HOM05D006889 ORTHO05D008614 2.6e-35 153.7 178 52.8
DCAR_030020 Daucus carota HOM05D006889 ORTHO05D008614 7.2e-33 145.6 260 41.5
TPR.G8913 Trifolium pratense HOM05D006889 ORTHO05D008614 1.0e-31 141.7 118 70.3
CBR_g38961 Chara braunii HOM05D006889 ORTHO05D008614 1.8e-28 131.0 386 39.4
ClCG01G004860 Citrullus lanatus HOM05D006889 ORTHO05D008614 5.3e-28 129.4 197 55.8
SEGI_12666 Sequoiadendron giganteum HOM05D006889 ORTHO05D008614 1.1e-25 121.7 157 49.0
SHI02511 Sapria himalayana HOM05D006889 ORTHO05D008614 3.1e-20 103.6 70 80.0
TPR.G34755 Trifolium pratense HOM05D006889 ORTHO05D008614 1.6e-19 101.3 62 85.5
Gohir.D02G011800 Gossypium hirsutum HOM05D004753 ORTHO05D005920 1.8e-15 87.8 171 43.3
Gorai.005G015000 Gossypium raimondii HOM05D004753 ORTHO05D005920 2.3e-15 87.4 171 43.3
MCO15G439 Micromonas commoda HOM05D006889 ORTHO05D008614 7.2e-09 65.9 218 38.5
SHI02512 Sapria himalayana HOM05D006889 ORTHO05D008614 9.5e-09 65.5 86 53.5
Cre17.g728200 Chlamydomonas reinhardtii HOM05D006889 ORTHO05D008614 4.7e-08 63.2 242 34.3
Gohir.D04G081932 Gossypium hirsutum HOM05D004753 ORTHO05D005920 2.3e-07 60.8 67 56.7
PRCOL_00000609 Prasinoderma coloniale HOM05D006889 ORTHO05D008614 2.0e-06 57.8 123 35.0


User provided reference genes

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