Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002641g0180 Nicotiana tabacum HOM05D005417 ORTHO05D002591 7.3e-243 843.6 463 100.0
Nitab4.5_0002985g0020 Nicotiana tabacum HOM05D005417 ORTHO05D002591 4.0e-148 528.9 337 84.6
Peaxi162Scf00372g00102 Petunia axillaris HOM05D005417 ORTHO05D002591 1.6e-104 384.0 385 63.9
PGSC0003DMG400022034 Solanum tuberosum HOM05D005417 ORTHO05D002591 4.4e-94 349.4 339 61.4
Solyc06g007790.1 Solanum lycopersicum HOM05D005417 ORTHO05D002591 7.7e-91 338.6 339 64.6
Sopen06g002670 Solanum pennellii HOM05D005417 ORTHO05D002591 5.0e-90 335.9 339 64.0
CAN.G181.55 Capsicum annuum HOM05D005417 ORTHO05D002591 5.5e-89 332.4 342 65.5
Peaxi162Scf00068g00216 Petunia axillaris HOM05D005417 ORTHO05D002591 1.3e-58 231.5 294 52.4
Nitab4.5_0001161g0100 Nicotiana tabacum HOM05D005417 ORTHO05D002591 1.1e-57 228.4 412 50.5
Dinv19167 Davidia involucrata HOM05D005417 ORTHO05D002591 7.5e-54 215.7 385 43.9
CSS0019537 Camellia sinensis var. sinensis HOM05D005417 ORTHO05D002591 1.6e-48 198.0 411 40.9
PGSC0003DMG400017495 Solanum tuberosum HOM05D005417 ORTHO05D002591 4.7e-48 196.4 380 46.8
CAN.G800.6 Capsicum annuum HOM05D005417 ORTHO05D002591 5.2e-47 193.0 312 42.6
Cfa010419 Carpinus fangiana HOM05D005417 ORTHO05D002591 8.9e-47 192.2 354 44.9
Dinv12644 Davidia involucrata HOM05D005417 ORTHO05D002591 1.2e-46 191.8 398 46.7
Actinidia39427 Actinidia chinensis HOM05D005417 ORTHO05D002591 1.5e-46 191.4 394 47.5
Manes.12G047700 Manihot esculenta HOM05D005417 ORTHO05D002591 1.3e-45 188.3 395 39.7
Nitab4.5_0003020g0050 Nicotiana tabacum HOM05D005417 ORTHO05D002591 1.3e-45 188.3 242 49.2
Potri.002G246400 Populus trichocarpa HOM05D005417 ORTHO05D002591 1.7e-45 188.0 440 43.0
Sabra02G0187500 Salix brachista HOM05D005417 ORTHO05D002591 4.6e-43 179.9 460 40.2
Nitab4.5_0003656g0060 Nicotiana tabacum HOM05D005417 ORTHO05D002591 5.0e-42 176.4 294 45.2
Solyc09g059550.1 Solanum lycopersicum HOM05D005417 ORTHO05D002591 8.6e-42 175.6 373 44.8
Sopen09g022730 Solanum pennellii HOM05D005417 ORTHO05D002591 2.5e-41 174.1 366 44.8
Duzib211G0292 Durio zibethinus HOM05D005417 ORTHO05D002591 7.3e-41 172.6 414 42.8
CiPaw.13G049000 Carya illinoinensis HOM05D005417 ORTHO05D002591 9.5e-41 172.2 429 42.0
QL09p051098 Quercus lobata HOM05D005417 ORTHO05D002591 3.6e-40 170.2 390 37.2
CiPaw.14G038800 Carya illinoinensis HOM05D005417 ORTHO05D002591 1.1e-39 168.7 374 39.0
Oeu007785.1 Olea europaea HOM05D005417 ORTHO05D002591 1.8e-39 167.9 372 39.8
Cc01_g16680 Coffea canephora HOM05D005417 ORTHO05D002591 2.3e-39 167.5 469 40.5
Nitab4.5_0013864g0020 Nicotiana tabacum HOM05D005417 ORTHO05D002591 4.0e-39 166.8 195 49.2
Thecc.01G219200 Theobroma cacao HOM05D005417 ORTHO05D002591 1.5e-38 164.9 425 41.6
Prupe.8G197900 Prunus persica HOM05D005417 ORTHO05D002591 2.0e-38 164.5 419 34.4
QL09p050923 Quercus lobata HOM05D005417 ORTHO05D002591 2.6e-38 164.1 380 37.9
TWI18G1450 Tripterygium wilfordii HOM05D005417 ORTHO05D002591 9.8e-38 162.2 350 37.4
Oeu051530.1 Olea europaea HOM05D005417 ORTHO05D002591 1.3e-37 161.8 414 40.1
Manes.13G049800 Manihot esculenta HOM05D005417 ORTHO05D002591 2.9e-37 160.6 415 36.1
Medtr7g055560 Medicago truncatula HOM05D005417 ORTHO05D002591 6.4e-37 159.5 372 39.0
Medtr7g055747 Medicago truncatula HOM05D005417 ORTHO05D002591 6.4e-37 159.5 372 39.0
Rhsim13G0048000 Rhododendron simsii HOM05D005417 ORTHO05D002591 1.9e-36 157.9 392 43.4
Gohir.A11G139800 Gossypium hirsutum HOM05D005417 ORTHO05D002591 2.4e-36 157.5 423 39.2
COL.COLO4_08651 Corchorus olitorius HOM05D005417 ORTHO05D002591 3.2e-36 157.1 443 39.5
Peaxi162Scf01312g00003 Petunia axillaris HOM05D005417 ORTHO05D002591 3.2e-36 157.1 194 47.9
arahy.Tifrunner.gnm1.ann1.K8JSLF Arachis hypogaea HOM05D005417 ORTHO05D002591 3.5e-35 153.7 371 38.0
Gohir.D11G145866 Gossypium hirsutum HOM05D005417 ORTHO05D002591 4.6e-35 153.3 419 37.2
Gohir.A07G092900 Gossypium hirsutum HOM05D005417 ORTHO05D002591 1.3e-34 151.8 379 43.0
Gorai.007G156400 Gossypium raimondii HOM05D005417 ORTHO05D002591 3.0e-34 150.6 421 37.8
Lalb_Chr03g0041401 Lupinus albus HOM05D005417 ORTHO05D002591 3.0e-34 150.6 132 60.6
Gohir.D07G097400 Gossypium hirsutum HOM05D005417 ORTHO05D002591 6.6e-34 149.4 377 42.7
SalBow6G1220 Salvia bowleyana HOM05D005417 ORTHO05D002591 6.6e-34 149.4 203 45.3
Eucgr.K02134 Eucalyptus grandis HOM05D005417 ORTHO05D002591 8.6e-34 149.1 378 37.3
MSTRG.18834 Avicennia marina HOM05D005417 ORTHO05D002591 1.5e-33 148.3 396 34.1
Psat3g149440 Pisum sativum HOM05D005417 ORTHO05D002591 2.5e-33 147.5 428 32.9
TWI75G1481 Tripterygium wilfordii HOM05D005417 ORTHO05D002591 5.6e-33 146.4 420 33.8
DCAR_012672 Daucus carota HOM05D005417 ORTHO05D002591 7.3e-33 146.0 415 33.5
TAR636G0419 Trochodendron aralioides HOM05D005417 ORTHO05D002591 3.6e-32 143.7 123 61.8
Rhsim01G0253400 Rhododendron simsii HOM05D005417 ORTHO05D002591 2.3e-31 141.0 422 34.6
Ciclev10024373m.g Citrus clementina HOM05D005417 ORTHO05D002591 3.1e-31 140.6 373 35.7
Gorai.001G104900 Gossypium raimondii HOM05D005417 ORTHO05D002591 3.1e-31 140.6 371 44.2
Lj1g0009273 Lotus japonicus HOM05D005417 ORTHO05D002591 3.1e-31 140.6 405 33.6
SGA_v2.0_scaffold156G37265 Striga asiatica HOM05D005417 ORTHO05D002591 4.0e-31 140.2 322 35.4
ECA248G2280 Erigeron canadensis HOM05D005417 ORTHO05D002591 1.2e-30 138.7 244 42.6
Cpa.g.sc34.103 Carica papaya HOM05D005417 ORTHO05D002591 4.4e-30 136.7 345 35.9
Aqoxy2G03972 Aquilegia oxysepala HOM05D005417 ORTHO05D002591 9.9e-30 135.6 306 36.9
ClCG07G002110 Citrullus lanatus HOM05D005417 ORTHO05D002591 8.4e-29 132.5 126 56.3
vmacro02785 Vaccinium macrocarpon HOM05D005417 ORTHO05D002591 1.1e-28 132.1 418 34.4
MELO3C022719.2 Cucumis melo HOM05D005417 ORTHO05D002591 1.4e-28 131.7 256 39.8
Gorai.001G188400 Gossypium raimondii HOM05D005417 ORTHO05D002591 1.4e-28 131.7 354 36.4
Gohir.A07G161200 Gossypium hirsutum HOM05D005417 ORTHO05D002591 2.4e-28 131.0 354 39.8
Aa31sc95G70 Aethionema arabicum HOM05D005417 ORTHO05D002591 3.2e-28 130.6 344 35.8
Solyc06g083330.2 Solanum lycopersicum HOM05D005417 ORTHO05D002591 3.2e-28 130.6 193 42.0
Ca_03471_v3 Cicer arietinum L. HOM05D005417 ORTHO05D002591 9.2e-28 129.0 233 42.5
Atru.chr6.1429 Acer truncatum HOM05D005417 ORTHO05D002591 1.2e-27 128.6 277 38.6
FAN15G1498 Fragaria x ananassa HOM05D005417 ORTHO05D002591 1.2e-27 128.6 168 47.6
Migut.D02505 Erythranthe guttata HOM05D005417 ORTHO05D002591 1.6e-27 128.3 160 48.8
Nn1g07983 Nelumbo nucifera HOM05D005417 ORTHO05D002591 1.6e-27 128.3 405 40.2
Sc05g0001930 Simmondsia chinensis HOM05D005417 ORTHO05D002591 2.1e-27 127.9 383 34.2
PGSC0003DMG400020102 Solanum tuberosum HOM05D005417 ORTHO05D002591 2.1e-27 127.9 193 40.9
TAR365G0760 Trochodendron aralioides HOM05D005417 ORTHO05D002591 2.1e-27 127.9 475 33.1
FvH4_2g18490 Fragaria vesca HOM05D005417 ORTHO05D002591 3.5e-27 127.1 138 51.4
FAN24G0779 Fragaria x ananassa HOM05D005417 ORTHO05D002591 3.5e-27 127.1 138 51.4
Glyma.18G159700 Glycine max HOM05D005417 ORTHO05D002591 4.6e-27 126.7 505 34.5
FAN27G1148 Fragaria x ananassa HOM05D005417 ORTHO05D002591 6.0e-27 126.3 138 51.4
HanXRQChr10g0279531 Helianthus annuus HOM05D005417 ORTHO05D002591 7.8e-27 125.9 188 46.3
Lsat_1_v5_gn_9_14981 Lactuca sativa HOM05D005417 ORTHO05D002591 7.8e-27 125.9 339 34.5
Glyma.08G348101 Glycine max HOM05D005417 ORTHO05D002591 1.0e-26 125.6 502 33.1
Phvul.008G132000 Phaseolus vulgaris HOM05D005417 ORTHO05D002591 2.3e-26 124.4 468 29.7
PGR083G2240 Punica granatum HOM05D005417 ORTHO05D002591 2.3e-26 124.4 272 37.1
Sopen06g034710 Solanum pennellii HOM05D005417 ORTHO05D002591 3.0e-26 124.0 192 41.1
ECA247G2945 Erigeron canadensis HOM05D005417 ORTHO05D002591 3.9e-26 123.6 283 38.5
RcHm_v2.0_Chr6g0284001 Rosa chinensis HOM05D005417 ORTHO05D002591 3.9e-26 123.6 222 40.1
vmacro14737 Vaccinium macrocarpon HOM05D005417 ORTHO05D002591 5.1e-26 123.2 137 50.4
VMungo1383G0191 Vigna mungo HOM05D005417 ORTHO05D002591 1.9e-25 121.3 457 29.3
BcaC06g35784 Brassica carinata HOM05D005417 ORTHO05D002591 7.3e-25 119.4 391 33.8
C07p10920 Brassica napus HOM05D005417 ORTHO05D002591 7.3e-25 119.4 387 34.4
BolC7t41558H Brassica oleracea HOM05D005417 ORTHO05D002591 7.3e-25 119.4 391 33.8
MD05G1170600 Malus domestica HOM05D005417 ORTHO05D002591 9.6e-25 119.0 412 29.9
MD10G1158800 Malus domestica HOM05D005417 ORTHO05D002591 2.1e-24 117.9 372 34.7
BraA07t28509Z Brassica rapa HOM05D005417 ORTHO05D002591 1.8e-23 114.8 408 31.9
A07p07230 Brassica napus HOM05D005417 ORTHO05D002591 2.4e-23 114.4 408 31.9
AL3G40820 Arabidopsis lyrata HOM05D005417 ORTHO05D002591 6.9e-23 112.8 398 34.7
Sed0010610 Sechium edule HOM05D005417 ORTHO05D002591 1.5e-22 111.7 126 52.4
Nn3g20048 Nelumbo nucifera HOM05D005417 ORTHO05D002591 2.0e-22 111.3 401 36.7
Nn3g20049 Nelumbo nucifera HOM05D005417 ORTHO05D002591 2.0e-22 111.3 401 36.7
Sp3g22720 Schrenkiella parvula HOM05D005417 ORTHO05D002591 2.0e-22 111.3 390 30.5
BcaB06g26721 Brassica carinata HOM05D005417 ORTHO05D002591 7.6e-22 109.4 349 30.7
PGR044G1095 Punica granatum HOM05D005417 ORTHO05D002591 9.9e-22 109.0 255 36.1
PSO017G4959 Papaver somniferum HOM05D005417 ORTHO05D002591 1.3e-21 108.6 365 33.2
EL10Ac7g17913 Beta vulgaris HOM05D005417 ORTHO05D002591 1.7e-21 108.2 396 34.6
THA.LOC104804626 Tarenaya hassleriana HOM05D005417 ORTHO05D002591 2.2e-21 107.8 376 31.6
SGA_v2.0_scaffold3G01638 Striga asiatica HOM05D005417 ORTHO05D002591 4.9e-21 106.7 115 51.3
AT3G25130 Arabidopsis thaliana HOM05D005417 ORTHO05D002591 6.4e-21 106.3 415 34.0
HanXRQChr01g0015481 Helianthus annuus HOM05D005417 ORTHO05D002591 6.4e-21 106.3 191 39.3
ATR0561G108 Amborella trichopoda HOM05D005417 ORTHO05D002591 8.4e-21 105.9 170 40.0
MSTRG.20970 Avicennia marina HOM05D005417 ORTHO05D002591 1.1e-20 105.5 146 43.2
Carub.0003s2546 Capsella rubella HOM05D005417 ORTHO05D002591 1.4e-20 105.1 385 35.6
PSO063G3464 Papaver somniferum HOM05D005417 ORTHO05D002591 2.4e-20 104.4 362 32.6
CARHR101450 Cardamine hirsuta HOM05D005417 ORTHO05D002591 1.2e-19 102.1 290 30.3
HPP92_009946 Vanilla planifolia HOM05D005417 ORTHO05D002591 2.3e-18 97.8 223 36.3
Haze_03369 Corylus avellana HOM05D005417 ORTHO05D002591 1.5e-17 95.1 264 40.9
MBI07_g27364_MAGBIO Magnolia biondii HOM05D005417 ORTHO05D002591 2.5e-17 94.4 117 47.9
TPR.G976 Trifolium pratense HOM05D005417 ORTHO05D002591 9.6e-17 92.4 342 31.9
TPR.G6388 Trifolium pratense HOM05D005417 ORTHO05D002591 5.3e-15 86.7 58 69.0
MBI11_g07415_MAGBIO Magnolia biondii HOM05D005417 ORTHO05D002591 6.9e-15 86.3 332 30.1
SalBow5G5435 Salvia bowleyana HOM05D005417 ORTHO05D002591 1.2e-14 85.5 170 39.4
Gohir.D07G164700 Gossypium hirsutum HOM05D005417 ORTHO05D002591 6.4e-13 79.7 324 35.5
unitig_899.g15407 Utricularia gibba HOM05D005417 ORTHO05D002591 5.4e-12 76.6 123 43.1
unitig_749.g13592 Utricularia gibba HOM05D005417 ORTHO05D002591 4.6e-11 73.6 165 30.9
ClCG09G008640 Citrullus lanatus HOM05D005417 ORTHO05D002591 3.0e-10 70.9 198 31.8
Os11g0458100 Oryza sativa ssp. japonica HOM05D005417 ORTHO05D002591 6.7e-10 69.7 156 36.5
Zm00001eb090480 Zea mays HOM05D005417 ORTHO05D002591 1.1e-09 68.9 262 29.4
AUR62016544 Chenopodium quinoa HOM05D005417 ORTHO05D002591 1.6e-08 65.1 208 34.1
MELO3C021078.2 Cucumis melo HOM05D005417 ORTHO05D002591 2.8e-08 64.3 196 32.7
Lj5g0025661 Lotus japonicus HOM05D005417 ORTHO05D002591 6.9e-07 59.7 151 32.5


User provided reference genes

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