Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002621g0090 Nicotiana tabacum HOM05D028284 ORTHO05D008569 1.7e-41 172.2 85 100.0
Nitab4.5_0002621g0120 Nicotiana tabacum HOM05D028284 ORTHO05D008569 8.4e-20 100.1 101 57.4
CAN.G186.38 Capsicum annuum HOM05D000012 ORTHO05D008569 3.7e-15 84.7 91 48.4
CAN.G186.75 Capsicum annuum HOM05D000012 ORTHO05D008569 3.7e-15 84.7 100 44.0
Oeu012330.2 Olea europaea HOM05D000012 ORTHO05D008569 6.3e-15 84.0 66 59.1
Oeu012328.1 Olea europaea HOM05D000012 ORTHO05D008569 9.0e-14 80.1 66 56.1
Manes.07G035900 Manihot esculenta HOM05D000012 ORTHO05D008569 2.0e-13 79.0 64 60.9
Manes.07G037900 Manihot esculenta HOM05D000012 ORTHO05D008569 4.5e-13 77.8 64 57.8
Nitab4.5_0002651g0050 Nicotiana tabacum HOM05D000012 ORTHO05D008569 4.5e-13 77.8 91 46.2
Oeu010145.1 Olea europaea HOM05D000012 ORTHO05D008569 1.7e-12 75.9 66 56.1
Manes.07G036633 Manihot esculenta HOM05D000012 ORTHO05D008569 3.8e-12 74.7 64 54.7
Nitab4.5_0000930g0070 Nicotiana tabacum HOM05D028284 ORTHO05D008569 3.8e-12 74.7 66 54.5
Oeu012333.1 Olea europaea HOM05D000012 ORTHO05D008569 5.0e-12 74.3 66 53.0
Dinv01019 Davidia involucrata HOM05D000012 ORTHO05D008569 5.5e-11 70.9 66 50.0
Dinv08051 Davidia involucrata HOM05D000012 ORTHO05D008569 2.1e-10 68.9 66 53.0
Dinv44145 Davidia involucrata HOM05D000012 ORTHO05D008569 2.7e-10 68.6 67 49.3
Oeu010146.1 Olea europaea HOM05D000012 ORTHO05D008569 4.6e-10 67.8 66 48.5
Oeu012327.1 Olea europaea HOM05D000012 ORTHO05D008569 4.6e-10 67.8 66 50.0
QL01p033795 Quercus lobata HOM05D000012 ORTHO05D008569 1.0e-09 66.6 100 36.0
SGA_v2.0_scaffold50G18558 Striga asiatica HOM05D000012 ORTHO05D008569 1.4e-09 66.2 69 52.2
CSS0017801 Camellia sinensis var. sinensis HOM05D000012 ORTHO05D008569 1.8e-09 65.9 66 45.5
SalBow6G3364 Salvia bowleyana HOM05D000012 ORTHO05D008569 3.0e-09 65.1 70 42.9
Migut.D02557 Erythranthe guttata HOM05D000012 ORTHO05D008569 8.8e-09 63.5 66 45.5
TAR626G0704 Trochodendron aralioides HOM05D000012 ORTHO05D008569 8.8e-09 63.5 64 46.9
Rhsim07G0238400 Rhododendron simsii HOM05D000012 ORTHO05D008569 1.9e-08 62.4 66 50.0
SalBow6G0877 Salvia bowleyana HOM05D000012 ORTHO05D008569 1.9e-08 62.4 70 38.6
TAR623G1521 Trochodendron aralioides HOM05D000012 ORTHO05D008569 2.5e-08 62.0 64 46.9
Rhsim07G0238800 Rhododendron simsii HOM05D000012 ORTHO05D008569 3.3e-08 61.6 66 50.0
CSS0026673 Camellia sinensis var. sinensis HOM05D000012 ORTHO05D008569 4.3e-08 61.2 66 42.4
Rhsim07G0238600 Rhododendron simsii HOM05D000012 ORTHO05D008569 5.7e-08 60.8 66 48.5
QL01p033779 Quercus lobata HOM05D000012 ORTHO05D008569 7.4e-08 60.5 64 43.8
GSVIVG01033988001 Vitis vinifera HOM05D000012 ORTHO05D008569 7.4e-08 60.5 66 39.4
ECA247G3524 Erigeron canadensis HOM05D000012 ORTHO05D008569 1.3e-07 59.7 68 47.1
ECA247G3992 Erigeron canadensis HOM05D030595 ORTHO05D008569 1.3e-07 59.7 68 48.5
TAR376G0707 Trochodendron aralioides HOM05D000012 ORTHO05D008569 1.3e-07 59.7 70 41.4
QL01p033709 Quercus lobata HOM05D021424 ORTHO05D008569 2.2e-07 58.9 64 40.6
ECA247G0675 Erigeron canadensis HOM05D000012 ORTHO05D008569 8.2e-07 57.0 71 43.7
Nn8g40966 Nelumbo nucifera HOM05D000012 ORTHO05D003972 2.4e-06 55.5 69 37.7
QL11p005516 Quercus lobata HOM05D000012 ORTHO05D008569 3.1e-06 55.1 64 39.1
HanXRQChr15g0463631 Helianthus annuus HOM05D000012 ORTHO05D008569 6.9e-06 53.9 65 43.1
Ciclev10019504m.g Citrus clementina HOM05D000012 ORTHO05D008569 9.1e-06 53.5 66 37.9
QL12p032203 Quercus lobata HOM05D000012 ORTHO05D008569 9.1e-06 53.5 64 34.4


User provided reference genes

Program Settings