Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002621g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.9e-59 232.3 111 100.0
Nitab4.5_0010159g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.0e-41 173.3 92 91.3
Nitab4.5_0000039g0040 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.7e-41 172.6 91 91.2
Nitab4.5_0006220g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 8.7e-41 170.2 92 88.0
Nitab4.5_0001774g0050 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.5e-40 169.5 92 88.0
Nitab4.5_0007543g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.6e-39 166.0 92 85.9
Nitab4.5_0007956g0060 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.6e-39 166.0 92 84.8
Nitab4.5_0011768g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 6.2e-39 164.1 92 83.7
Nitab4.5_0007025g0060 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.8e-38 162.5 92 84.8
Nitab4.5_0004029g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 4.0e-38 161.4 92 82.6
Nitab4.5_0004639g0040 Nicotiana tabacum HOM05D002047 ORTHO05D001422 9.0e-38 160.2 91 84.6
Nitab4.5_0005506g0030 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.5e-37 159.5 87 86.2
Nitab4.5_0000361g0110 Nicotiana tabacum HOM05D002047 ORTHO05D001422 2.9e-36 155.2 87 86.2
Nitab4.5_0005572g0030 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.6e-34 149.4 83 85.5
Nitab4.5_0004708g0030 Nicotiana tabacum HOM05D002047 ORTHO05D001422 2.1e-34 149.1 83 85.5
Nitab4.5_0007535g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 3.5e-34 148.3 83 85.5
Nitab4.5_0010859g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 4.6e-34 147.9 83 84.3
Nitab4.5_0004516g0030 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.8e-33 146.0 83 84.3
Nitab4.5_0011312g0040 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.8e-33 146.0 83 84.3
Nitab4.5_0003124g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 2.3e-33 145.6 83 84.3
Nitab4.5_0012871g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 3.9e-33 144.8 106 69.8
Nitab4.5_0004944g0060 Nicotiana tabacum HOM05D002047 ORTHO05D001422 6.7e-33 144.1 78 87.2
Nitab4.5_0001726g0060 Nicotiana tabacum HOM05D002047 ORTHO05D001422 8.7e-33 143.7 83 83.1
Nitab4.5_0002972g0060 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.5e-32 142.9 81 82.7
Nitab4.5_0003208g0100 Nicotiana tabacum HOM05D002047 ORTHO05D001422 4.3e-32 141.4 79 88.6
Nitab4.5_0005334g0050 Nicotiana tabacum HOM05D002047 ORTHO05D001422 4.3e-32 141.4 79 86.1
Nitab4.5_0008334g0030 Nicotiana tabacum HOM05D002047 ORTHO05D001422 9.6e-32 140.2 83 80.7
Nitab4.5_0022411g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 9.6e-32 140.2 82 81.7
Nitab4.5_0000780g0110 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.3e-31 139.8 83 81.9
Nitab4.5_0003533g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.6e-31 139.4 83 80.7
Nitab4.5_0001165g0050 Nicotiana tabacum HOM05D002047 ORTHO05D001422 2.1e-31 139.0 83 80.7
Nitab4.5_0002352g0100 Nicotiana tabacum HOM05D002047 ORTHO05D001422 3.7e-31 138.3 82 81.7
Nitab4.5_0008208g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 6.2e-31 137.5 90 78.9
Nitab4.5_0003592g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 2.4e-30 135.6 82 81.7
Nitab4.5_0007498g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 3.1e-30 135.2 83 80.7
Nitab4.5_0007503g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 3.1e-30 135.2 81 82.7
Nitab4.5_0003208g0080 Nicotiana tabacum HOM05D002047 ORTHO05D001422 2.0e-29 132.5 73 87.7
Nitab4.5_0003146g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 3.4e-29 131.7 83 78.3
Nitab4.5_0000929g0130 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.7e-28 129.4 78 79.5
Nitab4.5_0001094g0070 Nicotiana tabacum HOM05D002047 ORTHO05D001422 2.2e-28 129.0 83 78.3
Nitab4.5_0012615g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 8.4e-28 127.1 77 81.8
Nitab4.5_0013629g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 9.3e-27 123.6 83 77.1
Nitab4.5_0003114g0030 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.8e-25 119.4 68 80.9
Nitab4.5_0001663g0110 Nicotiana tabacum HOM05D002047 ORTHO05D001422 2.5e-24 115.5 68 80.9
Nitab4.5_0008733g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 2.5e-24 115.5 90 66.7
Nitab4.5_0003700g0030 Nicotiana tabacum HOM05D002047 ORTHO05D001422 4.3e-24 114.8 66 86.4
Nitab4.5_0003207g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 5.6e-24 114.4 83 69.9
Nitab4.5_0001919g0170 Nicotiana tabacum HOM05D002047 ORTHO05D001422 9.6e-24 113.6 107 58.9
Nitab4.5_0004249g0040 Nicotiana tabacum HOM05D002047 ORTHO05D001422 3.7e-23 111.7 64 85.9
Nitab4.5_0004459g0040 Nicotiana tabacum HOM05D002047 ORTHO05D001422 8.2e-23 110.5 83 68.7
Nitab4.5_0015811g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.4e-22 109.8 63 81.0
Nitab4.5_0004394g0050 Nicotiana tabacum HOM05D002047 ORTHO05D001422 3.1e-22 108.6 96 62.5
Nitab4.5_0002523g0030 Nicotiana tabacum HOM05D002047 ORTHO05D001422 5.8e-21 104.4 66 77.3
Nitab4.5_0008512g0030 Nicotiana tabacum HOM05D002047 ORTHO05D001422 5.8e-21 104.4 59 88.1
Nitab4.5_0014758g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 4.2e-19 98.2 84 61.9
Nitab4.5_0002612g0090 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.6e-18 96.3 74 62.2
Nitab4.5_0004029g0030 Nicotiana tabacum HOM05D002047 ORTHO05D001422 2.7e-18 95.5 55 85.5
Nitab4.5_0002662g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 3.5e-18 95.1 74 62.2
Nitab4.5_0005039g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 7.9e-18 94.0 78 59.0
Nitab4.5_0003901g0090 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.0e-17 93.6 74 62.2
Nitab4.5_0003148g0040 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.8e-17 92.8 74 60.8
Nitab4.5_0003979g0040 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.8e-17 92.8 70 62.9
Nitab4.5_0001878g0080 Nicotiana tabacum HOM05D002047 ORTHO05D001422 2.3e-17 92.4 103 51.5
Nitab4.5_0000427g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 3.0e-17 92.0 74 60.8
Nitab4.5_0002183g0080 Nicotiana tabacum HOM05D002047 ORTHO05D001422 3.9e-17 91.7 70 65.7
Nitab4.5_0006206g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 2.5e-16 89.0 49 87.8
Nitab4.5_0001116g0070 Nicotiana tabacum HOM05D002047 ORTHO05D001422 3.3e-16 88.6 74 59.5
Nitab4.5_0001155g0110 Nicotiana tabacum HOM05D002047 ORTHO05D001422 3.3e-16 88.6 65 64.6
Nitab4.5_0010052g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 3.3e-16 88.6 74 56.8
Nitab4.5_0001785g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 4.3e-16 88.2 70 60.0
Nitab4.5_0011116g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 4.3e-16 88.2 69 59.4
Nitab4.5_0015113g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 4.3e-16 88.2 74 56.8
Nitab4.5_0004848g0050 Nicotiana tabacum HOM05D002047 ORTHO05D001422 5.7e-16 87.8 74 60.8
Nitab4.5_0019913g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 7.4e-16 87.4 69 62.3
Nitab4.5_0001555g0060 Nicotiana tabacum HOM05D002047 ORTHO05D001422 9.7e-16 87.0 65 63.1
Nitab4.5_0001560g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 9.7e-16 87.0 69 60.9
Nitab4.5_0000340g0110 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.3e-15 86.7 73 58.9
Nitab4.5_0013909g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.3e-15 86.7 74 59.5
Nitab4.5_0001116g0050 Nicotiana tabacum HOM05D002047 ORTHO05D001422 2.2e-15 85.9 74 58.1
Nitab4.5_0005096g0060 Nicotiana tabacum HOM05D002047 ORTHO05D001422 3.7e-15 85.1 74 58.1
Nitab4.5_0000468g0160 Nicotiana tabacum HOM05D002047 ORTHO05D001422 6.3e-15 84.3 73 57.5
Nitab4.5_0000888g0060 Nicotiana tabacum HOM05D002047 ORTHO05D001422 6.3e-15 84.3 73 57.5
Nitab4.5_0000230g0270 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.1e-14 83.6 91 51.6
Nitab4.5_0003101g0040 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.1e-14 83.6 74 55.4
Nitab4.5_0012188g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.1e-14 83.6 65 61.5
Nitab4.5_0000918g0050 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.8e-14 82.8 67 59.7
Nitab4.5_0011745g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 2.4e-14 82.4 53 79.2
Nitab4.5_0000596g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 3.1e-14 82.0 65 61.5
Nitab4.5_0001619g0130 Nicotiana tabacum HOM05D002047 ORTHO05D001422 3.1e-14 82.0 74 56.8
Nitab4.5_0007649g0030 Nicotiana tabacum HOM05D002047 ORTHO05D001422 4.1e-14 81.6 71 54.9
Nitab4.5_0007845g0040 Nicotiana tabacum HOM05D002047 ORTHO05D001422 4.1e-14 81.6 67 56.7
Nitab4.5_0005665g0030 Nicotiana tabacum HOM05D002047 ORTHO05D001422 5.3e-14 81.3 67 58.2
Nitab4.5_0002149g0070 Nicotiana tabacum HOM05D002047 ORTHO05D001422 9.0e-14 80.5 65 61.5
Nitab4.5_0001698g0110 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.2e-13 80.1 69 58.0
Nitab4.5_0003393g0040 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.2e-13 80.1 64 60.9
Nitab4.5_0005994g0090 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.2e-13 80.1 65 60.0
Nitab4.5_0008253g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 2.6e-13 79.0 67 56.7
Nitab4.5_0004456g0030 Nicotiana tabacum HOM05D002047 ORTHO05D001422 4.5e-13 78.2 67 56.7
Nitab4.5_0000023g0250 Nicotiana tabacum HOM05D002047 ORTHO05D001422 7.6e-13 77.4 95 46.3
Nitab4.5_0003542g0030 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.0e-12 77.0 65 60.0
Nitab4.5_0007773g0060 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.0e-12 77.0 69 58.0
Nitab4.5_0010485g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.7e-12 76.3 67 53.7
Nitab4.5_0000929g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 5.0e-12 74.7 69 50.7
Nitab4.5_0004811g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 8.5e-12 73.9 72 54.2
Nitab4.5_0018015g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.1e-11 73.6 86 45.3
Nitab4.5_0003379g0110 Nicotiana tabacum HOM05D002047 ORTHO05D001422 3.2e-11 72.0 56 62.5
Nitab4.5_0002447g0030 Nicotiana tabacum HOM05D002047 ORTHO05D001422 4.2e-11 71.6 39 82.1
Nitab4.5_0008448g0030 Nicotiana tabacum HOM05D002047 ORTHO05D001422 4.2e-11 71.6 74 51.4
Sopen11g013600 Solanum pennellii HOM05D008695 ORTHO05D001422 4.2e-11 71.6 100 37.0
Nitab4.5_0002204g0050 Nicotiana tabacum HOM05D002047 ORTHO05D001422 5.5e-11 71.2 58 58.6
Nitab4.5_0002065g0030 Nicotiana tabacum HOM05D002047 ORTHO05D001422 7.2e-11 70.9 65 58.5
Nitab4.5_0002276g0030 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.6e-10 69.7 74 51.4
Nitab4.5_0004948g0030 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.6e-10 69.7 74 52.7
Nitab4.5_0006358g0060 Nicotiana tabacum HOM05D002047 ORTHO05D001422 3.6e-10 68.6 63 58.7
Nitab4.5_0008026g0040 Nicotiana tabacum HOM05D002047 ORTHO05D001422 4.6e-10 68.2 59 52.5
Nitab4.5_0011858g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 4.6e-10 68.2 64 54.7
Nitab4.5_0001877g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 7.9e-10 67.4 53 64.2
Nitab4.5_0004104g0130 Nicotiana tabacum HOM05D002047 ORTHO05D001422 7.9e-10 67.4 58 56.9
Nitab4.5_0007488g0050 Nicotiana tabacum HOM05D002047 ORTHO05D001422 7.9e-10 67.4 61 52.5
Sopen01g015000 Solanum pennellii HOM05D008695 ORTHO05D001422 7.9e-10 67.4 81 42.0
Sopen06g011080 Solanum pennellii HOM05D008695 ORTHO05D001422 7.9e-10 67.4 81 43.2
Sopen10g008400 Solanum pennellii HOM05D000047 ORTHO05D000044 7.9e-10 67.4 81 42.0
Sopen09g022070 Solanum pennellii HOM05D000047 ORTHO05D001422 1.0e-09 67.0 91 39.6
Nitab4.5_0000006g0190 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.4e-09 66.6 63 54.0
Sopen03g011960 Solanum pennellii HOM05D008695 ORTHO05D001422 1.4e-09 66.6 81 42.0
Sopen07g009220 Solanum pennellii HOM05D008695 ORTHO05D001422 1.4e-09 66.6 81 42.0
Nitab4.5_0001510g0070 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.8e-09 66.2 51 70.6
Sopen01g013960 Solanum pennellii HOM05D008695 ORTHO05D001422 1.8e-09 66.2 81 40.7
Nitab4.5_0001410g0040 Nicotiana tabacum HOM05D002047 ORTHO05D001422 3.0e-09 65.5 74 50.0
Sopen08g015910 Solanum pennellii HOM05D000047 ORTHO05D000044 3.9e-09 65.1 81 40.7
Nitab4.5_0000147g0250 Nicotiana tabacum HOM05D002047 ORTHO05D001422 5.1e-09 64.7 69 49.3
Nitab4.5_0001649g0060 Nicotiana tabacum HOM05D002047 ORTHO05D001422 5.1e-09 64.7 59 52.5
Sopen05g021760 Solanum pennellii HOM05D008695 ORTHO05D001422 1.1e-08 63.5 81 40.7
Sopen12g021750 Solanum pennellii HOM05D000047 ORTHO05D000044 1.1e-08 63.5 81 40.7
Nitab4.5_0005439g0050 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.9e-08 62.8 39 79.5
Sopen04g013010 Solanum pennellii HOM05D008695 ORTHO05D001422 1.9e-08 62.8 77 42.9
Sopen11g018120 Solanum pennellii HOM05D008695 ORTHO05D001422 2.5e-08 62.4 79 40.5
Sopen02g008890 Solanum pennellii HOM05D008695 ORTHO05D001422 3.3e-08 62.0 81 39.5
Nitab4.5_0004446g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 7.4e-08 60.8 56 51.8
Nitab4.5_0004952g0010 Nicotiana tabacum HOM05D008440 ORTHO05D001422 7.4e-08 60.8 82 37.8
Nitab4.5_0009372g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 7.4e-08 60.8 44 65.9
Nitab4.5_0007494g0050 Nicotiana tabacum HOM05D002047 ORTHO05D001422 9.7e-08 60.5 74 45.9
Sopen11g014810 Solanum pennellii HOM05D008695 ORTHO05D001422 9.7e-08 60.5 81 38.3
Nitab4.5_0000199g0080 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.8e-07 58.9 76 43.4
Nitab4.5_0005061g0030 Nicotiana tabacum HOM05D008440 ORTHO05D001422 2.8e-07 58.9 82 36.6
Nitab4.5_0010465g0010 Nicotiana tabacum HOM05D007487 ORTHO05D001422 2.8e-07 58.9 98 34.7
Nitab4.5_0026237g0010 Nicotiana tabacum HOM05D008440 ORTHO05D001422 2.8e-07 58.9 82 36.6
Nitab4.5_0000652g0010 Nicotiana tabacum HOM05D008440 ORTHO05D001422 3.7e-07 58.5 82 36.6
Nitab4.5_0000665g0050 Nicotiana tabacum HOM05D002047 ORTHO05D001422 3.7e-07 58.5 53 62.3
Nitab4.5_0002622g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 8.2e-07 57.4 65 47.7
Nitab4.5_0001843g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.1e-06 57.0 80 40.0
Sopen03g015690 Solanum pennellii HOM05D008695 ORTHO05D001422 1.4e-06 56.6 81 39.5
Sopen08g011480 Solanum pennellii HOM05D008695 ORTHO05D001422 1.4e-06 56.6 81 39.5
Nitab4.5_0000522g0120 Nicotiana tabacum HOM05D008440 ORTHO05D001422 1.8e-06 56.2 69 40.6
Nitab4.5_0009741g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.8e-06 56.2 81 40.7
Nitab4.5_0000020g0120 Nicotiana tabacum HOM05D002047 ORTHO05D001422 2.4e-06 55.8 33 75.8
Nitab4.5_0000587g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.4e-06 55.8 80 40.0
Nitab4.5_0002542g0100 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.1e-06 55.5 72 43.1
Sopen03g009300 Solanum pennellii HOM05D004926 ORTHO05D013907 3.1e-06 55.5 90 43.3
Nitab4.5_0004347g0040 Nicotiana tabacum HOM05D002047 ORTHO05D001422 4.1e-06 55.1 83 41.0
Nitab4.5_0000462g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.3e-06 54.7 80 40.0
Nitab4.5_0002890g0060 Nicotiana tabacum HOM05D002047 ORTHO05D001422 5.3e-06 54.7 27 92.6
Nitab4.5_0008506g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 5.3e-06 54.7 27 92.6
Nitab4.5_0000250g0050 Nicotiana tabacum HOM05D002047 ORTHO05D001422 6.9e-06 54.3 58 46.6
Nitab4.5_0005383g0030 Nicotiana tabacum HOM05D002047 ORTHO05D001422 6.9e-06 54.3 49 53.1
Sopen05g011410 Solanum pennellii HOM05D004926 ORTHO05D013907 9.1e-06 53.9 90 42.2


User provided reference genes

Program Settings