Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002612g0010 Nicotiana tabacum HOM05D010455 ORTHO05D010927 2.9e-160 568.5 290 100.0
Nitab4.5_0001971g0050 Nicotiana tabacum HOM05D010455 ORTHO05D010927 2.1e-139 499.2 290 90.0
PGSC0003DMG400024774 Solanum tuberosum HOM05D010455 ORTHO05D010927 1.2e-97 360.5 297 70.0
Sopen01g043600 Solanum pennellii HOM05D010455 ORTHO05D010927 5.7e-92 341.7 297 67.3
Peaxi162Scf00037g00185 Petunia axillaris HOM05D010455 ORTHO05D010927 2.2e-91 339.7 297 66.3
Solyc01g100070.3 Solanum lycopersicum HOM05D010455 ORTHO05D010927 4.5e-81 305.4 276 66.3
Dinv24410 Davidia involucrata HOM05D010455 ORTHO05D010927 8.6e-24 115.2 295 32.9
Manes.09G174200 Manihot esculenta HOM05D010455 ORTHO05D010927 2.4e-18 97.1 296 34.8
QL03p018916 Quercus lobata HOM05D015247 ORTHO05D010927 1.6e-14 84.3 295 30.5
Nitab4.5_0000322g0150 Nicotiana tabacum HOM05D010455 ORTHO05D010927 6.2e-14 82.4 69 63.8
ECA236G1914 Erigeron canadensis HOM05D000101 ORTHO05D000089 8.4e-11 72.0 47 66.0
Migut.B01004 Erythranthe guttata HOM05D010455 ORTHO05D010927 8.4e-11 72.0 105 41.9
Cpa.g.sc48.126 Carica papaya HOM05D010455 ORTHO05D010927 3.2e-10 70.1 55 61.8
unitig_42.g32309 Utricularia gibba HOM05D010455 ORTHO05D010927 3.2e-10 70.1 79 46.8
unitig_899.g14744 Utricularia gibba HOM05D010455 ORTHO05D010927 3.2e-10 70.1 79 46.8
Actinidia19768 Actinidia chinensis HOM05D010455 ORTHO05D010927 5.4e-10 69.3 56 58.9
Sabra05G0027500 Salix brachista HOM05D015247 ORTHO05D010927 7.1e-10 68.9 53 62.3
Potri.005G021500 Populus trichocarpa HOM05D015247 ORTHO05D010927 1.2e-09 68.2 62 56.5
Prupe.6G317300 Prunus persica HOM05D010455 ORTHO05D010927 1.6e-09 67.8 67 50.7
CSS0003559 Camellia sinensis var. sinensis HOM05D010455 ORTHO05D010927 2.1e-09 67.4 34 79.4
CSS0040289 Camellia sinensis var. sinensis HOM05D010455 ORTHO05D010927 2.1e-09 67.4 34 79.4
Lalb_Chr02g0148001 Lupinus albus HOM05D014479 ORTHO05D010927 2.7e-09 67.0 85 43.5
Sabra13G0010500 Salix brachista HOM05D015247 ORTHO05D010927 2.7e-09 67.0 289 28.4
Lsat_1_v5_gn_9_124561 Lactuca sativa HOM05D010455 ORTHO05D010927 4.6e-09 66.2 58 51.7
Rhsim05G0136000 Rhododendron simsii HOM05D010455 ORTHO05D010927 4.6e-09 66.2 34 82.4
Ciclev10003158m.g Citrus clementina HOM05D015247 ORTHO05D010927 7.9e-09 65.5 287 25.4
FAN05G0049 Fragaria x ananassa HOM05D023588 ORTHO05D025400 2.3e-08 63.9 64 53.1
Sc16g0008660 Simmondsia chinensis HOM05D031177 ORTHO05D026471 6.7e-08 62.4 156 32.7
THA.LOC104802786 Tarenaya hassleriana HOM05D012757 ORTHO05D010927 1.1e-07 61.6 113 37.2
CARHR186470 Cardamine hirsuta HOM05D012757 ORTHO05D010927 2.5e-07 60.5 35 71.4
Duzib177G0175 Durio zibethinus HOM05D016798 ORTHO05D016261 4.3e-07 59.7 300 26.7
Potri.013G011950 Populus trichocarpa HOM05D015247 ORTHO05D010927 5.6e-07 59.3 301 26.2
THA.LOC104820098 Tarenaya hassleriana HOM05D012757 ORTHO05D010927 7.4e-07 58.9 56 50.0
Ah.06g190030 Amaranthus hybridus HOM05D031177 ORTHO05D026471 1.3e-06 58.2 39 66.7
Thecc.05G318400 Theobroma cacao HOM05D016798 ORTHO05D016261 1.3e-06 58.2 306 25.8
FvH4_6g07020 Fragaria vesca HOM05D023588 ORTHO05D025400 2.1e-06 57.4 64 50.0
FAN14G1661 Fragaria x ananassa HOM05D023588 ORTHO05D025400 2.1e-06 57.4 64 50.0
Thhalv10005673m.g Eutrema salsugineum HOM05D012757 ORTHO05D010927 2.8e-06 57.0 35 68.6
BcaB04g19697 Brassica carinata HOM05D012757 ORTHO05D010927 6.2e-06 55.8 205 27.3


User provided reference genes

Program Settings