Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002611g0130 Nicotiana tabacum HOM05D006325 ORTHO05D007878 2.3e-71 272.3 160 100.0
Nitab4.5_0003551g0100 Nicotiana tabacum HOM05D006325 ORTHO05D007878 9.3e-28 127.5 82 82.9
PGSC0003DMG403011204 Solanum tuberosum HOM05D006325 ORTHO05D007878 2.5e-25 119.4 86 76.7
Nitab4.5_0003551g0110 Nicotiana tabacum HOM05D006325 ORTHO05D007878 7.4e-25 117.9 85 82.4
PGSC0003DMG402022984 Solanum tuberosum HOM05D006325 ORTHO05D007878 8.1e-24 114.4 86 74.4
CAN.G160.11 Capsicum annuum HOM05D006325 ORTHO05D007878 2.4e-23 112.8 87 74.7
PGSC0003DMG400011149 Solanum tuberosum HOM05D006325 ORTHO05D007878 9.0e-23 110.9 86 73.3
PGSC0003DMG401022984 Solanum tuberosum HOM05D006325 ORTHO05D007878 3.8e-21 105.5 86 68.6
CAN.G160.12 Capsicum annuum HOM05D006325 ORTHO05D007878 1.4e-20 103.6 110 67.3
Sopen07g002010 Solanum pennellii HOM05D006325 ORTHO05D007878 3.2e-20 102.4 83 77.1
Solyc11g020860.1 Solanum lycopersicum HOM05D006325 ORTHO05D007878 5.5e-20 101.7 86 70.9
PGSC0003DMG400009263 Solanum tuberosum HOM05D006325 ORTHO05D007878 7.9e-19 97.8 86 75.6
CAN.G2122.2 Capsicum annuum HOM05D006325 ORTHO05D007878 1.0e-18 97.4 88 71.6
Hma1.2p1_0594F.1_g185940 Hydrangea macrophylla HOM05D006325 ORTHO05D007878 1.0e-18 97.4 86 62.8
Sopen11g011030 Solanum pennellii HOM05D006325 ORTHO05D007878 2.3e-18 96.3 86 74.4
CAN.G160.9 Capsicum annuum HOM05D006325 ORTHO05D007878 3.9e-18 95.5 96 64.6
Sopen07g002000 Solanum pennellii HOM05D006325 ORTHO05D007878 2.5e-17 92.8 86 72.1
CAN.G2122.1 Capsicum annuum HOM05D006325 ORTHO05D007878 3.3e-17 92.4 107 55.1
CAN.G160.10 Capsicum annuum HOM05D006325 ORTHO05D007878 4.3e-17 92.0 107 55.1
CSS0005985 Camellia sinensis var. sinensis HOM05D006325 ORTHO05D007878 9.6e-17 90.9 79 67.1
CSS0005499 Camellia sinensis var. sinensis HOM05D006325 ORTHO05D007878 2.1e-16 89.7 79 65.8
Phvul.002G178300 Phaseolus vulgaris HOM05D006325 ORTHO05D007878 4.8e-16 88.6 86 54.7
Phvul.002G179400 Phaseolus vulgaris HOM05D006325 ORTHO05D007878 4.8e-16 88.6 86 54.7
Potri.011G081001 Populus trichocarpa HOM05D006325 ORTHO05D007878 6.9e-15 84.7 86 51.2
Manes.17G073700 Manihot esculenta HOM05D006325 ORTHO05D007878 4.5e-14 82.0 83 62.7
MD10G1258900 Malus domestica HOM05D006325 ORTHO05D007878 7.6e-14 81.3 99 51.5
Nn3g20453 Nelumbo nucifera HOM05D006325 ORTHO05D007878 1.0e-13 80.9 77 64.9
Psat7g080440 Pisum sativum HOM05D006325 ORTHO05D007878 1.3e-13 80.5 89 64.0
Thecc.06G145500 Theobroma cacao HOM05D006325 ORTHO05D007878 1.3e-13 80.5 93 52.7
Sabra11G0064500 Salix brachista HOM05D006325 ORTHO05D007878 2.2e-13 79.7 86 48.8
Cpa.g.sc17.42 Carica papaya HOM05D006325 ORTHO05D007878 2.9e-13 79.3 90 63.3
Prupe.4G084800 Prunus persica HOM05D006325 ORTHO05D007878 2.9e-13 79.3 96 59.4
Ciclev10026858m.g Citrus clementina HOM05D006325 ORTHO05D007878 3.8e-13 79.0 86 51.2
Glyma.05G143000 Glycine max HOM05D006325 ORTHO05D007878 3.8e-13 79.0 91 60.4
Glyma.08G099000 Glycine max HOM05D006325 ORTHO05D007878 8.4e-13 77.8 91 50.5
Potri.004G133180 Populus trichocarpa HOM05D006325 ORTHO05D007878 1.1e-12 77.4 83 50.6
Lalb_Chr13g0293971 Lupinus albus HOM05D006325 ORTHO05D007878 1.4e-12 77.0 92 55.4
Ciclev10017179m.g Citrus clementina HOM05D006325 ORTHO05D007878 2.5e-12 76.3 99 46.5
Ciclev10026747m.g Citrus clementina HOM05D006325 ORTHO05D007878 3.2e-12 75.9 78 55.1
Lsat_1_v5_gn_0_34220 Lactuca sativa HOM05D006325 ORTHO05D007878 4.2e-12 75.5 86 50.0
Medtr4g083110 Medicago truncatula HOM05D006325 ORTHO05D007878 4.2e-12 75.5 81 46.9
TPR.G34042 Trifolium pratense HOM05D006325 ORTHO05D007878 4.2e-12 75.5 83 54.2
Eucgr.D00273 Eucalyptus grandis HOM05D006325 ORTHO05D007878 5.5e-12 75.1 101 47.5
FAN21G1261 Fragaria x ananassa HOM05D006325 ORTHO05D007878 7.1e-12 74.7 90 55.6
Sed0008419 Sechium edule HOM05D006325 ORTHO05D007878 9.3e-12 74.3 82 48.8
Duzib192G0952 Durio zibethinus HOM05D006325 ORTHO05D007878 1.2e-11 73.9 94 56.4
MELO3C007112.2 Cucumis melo HOM05D006325 ORTHO05D007878 2.1e-11 73.2 81 56.8
Cc00_g01980 Coffea canephora HOM05D006325 ORTHO05D007878 2.7e-11 72.8 84 46.4
Ca_18164_v3 Cicer arietinum L. HOM05D006325 ORTHO05D007878 3.5e-11 72.4 89 48.3
CsaV3_6G051960 Cucumis sativus L. HOM05D006325 ORTHO05D007878 4.6e-11 72.0 82 54.9
Peaxi162Scf00062g00009 Petunia axillaris HOM05D006325 ORTHO05D007878 4.6e-11 72.0 65 64.6
RcHm_v2.0_Chr5g0014631 Rosa chinensis HOM05D006325 ORTHO05D007878 4.6e-11 72.0 92 45.7
FAN11G2857 Fragaria x ananassa HOM05D006325 ORTHO05D007878 6.1e-11 71.6 90 54.4
BcaB07g32625 Brassica carinata HOM05D006325 ORTHO05D007878 1.3e-10 70.5 56 62.5
FvH4_3g05130 Fragaria vesca HOM05D006325 ORTHO05D007878 1.3e-10 70.5 88 51.1
BcaC05g27053 Brassica carinata HOM05D006325 ORTHO05D007878 1.8e-10 70.1 56 62.5
C05p29100 Brassica napus HOM05D006325 ORTHO05D007878 1.8e-10 70.1 56 62.5
BolC5t31641H Brassica oleracea HOM05D006325 ORTHO05D007878 1.8e-10 70.1 56 62.5
CiPaw.09G120800 Carya illinoinensis HOM05D006325 ORTHO05D007878 1.8e-10 70.1 78 57.7
Gorai.009G153100 Gossypium raimondii HOM05D006325 ORTHO05D007878 1.8e-10 70.1 91 49.5
TPR.G13312 Trifolium pratense HOM05D006325 ORTHO05D007878 1.8e-10 70.1 89 55.1
Medtr5g077640 Medicago truncatula HOM05D006325 ORTHO05D007878 2.3e-10 69.7 89 48.3
TPR.G21965 Trifolium pratense HOM05D006325 ORTHO05D007878 2.3e-10 69.7 89 57.3
CANSAT35G0285 Cannabis sativa HOM05D006325 ORTHO05D007878 3.0e-10 69.3 45 75.6
DCAR_007876 Daucus carota HOM05D006325 ORTHO05D007878 3.0e-10 69.3 92 46.7
FAN25G3009 Fragaria x ananassa HOM05D006325 ORTHO05D007878 3.0e-10 69.3 88 54.5
Nitab4.5_0008310g0030 Nicotiana tabacum HOM05D006325 ORTHO05D007878 3.0e-10 69.3 69 58.0
Oeu030957.1 Olea europaea HOM05D006325 ORTHO05D007878 3.0e-10 69.3 53 67.9
AL1G44210 Arabidopsis lyrata HOM05D006325 ORTHO05D007878 3.9e-10 68.9 60 65.0
A09p36260 Brassica napus HOM05D006325 ORTHO05D007878 3.9e-10 68.9 80 52.5
BraA09t39151Z Brassica rapa HOM05D006325 ORTHO05D007878 3.9e-10 68.9 80 50.0
CiPaw.10G089300 Carya illinoinensis HOM05D006325 ORTHO05D007878 3.9e-10 68.9 80 52.5
Lsat_1_v5_gn_7_27621 Lactuca sativa HOM05D006325 ORTHO05D007878 3.9e-10 68.9 91 45.1
QL05p055432 Quercus lobata HOM05D006325 ORTHO05D007878 3.9e-10 68.9 85 49.4
Carub.0001s2849 Capsella rubella HOM05D006325 ORTHO05D007878 5.1e-10 68.6 63 60.3
Lj4g0010729 Lotus japonicus HOM05D006325 ORTHO05D007878 5.1e-10 68.6 88 54.5
Lalb_Chr07g0187521 Lupinus albus HOM05D006325 ORTHO05D007878 5.1e-10 68.6 101 44.6
QL04p045948 Quercus lobata HOM05D006325 ORTHO05D007878 8.7e-10 67.8 78 46.2
AT1G30260 Arabidopsis thaliana HOM05D006325 ORTHO05D007878 1.1e-09 67.4 42 76.2
Gohir.D05G149100 Gossypium hirsutum HOM05D006325 ORTHO05D007878 1.1e-09 67.4 91 48.4
Sp1g26100 Schrenkiella parvula HOM05D006325 ORTHO05D007878 1.5e-09 67.0 53 64.2
BcaC06g35496 Brassica carinata HOM05D006325 ORTHO05D007878 1.9e-09 66.6 78 51.3
A07p10030 Brassica napus HOM05D006325 ORTHO05D007878 1.9e-09 66.6 78 51.3
BolC7t42032H Brassica oleracea HOM05D006325 ORTHO05D007878 1.9e-09 66.6 78 51.3
BraA07t28796Z Brassica rapa HOM05D006325 ORTHO05D007878 1.9e-09 66.6 78 51.3
FAN16G1041 Fragaria x ananassa HOM05D006325 ORTHO05D007878 1.9e-09 66.6 88 53.4
FAN16G2667 Fragaria x ananassa HOM05D006325 ORTHO05D007878 1.9e-09 66.6 88 53.4
Haze_05647 Corylus avellana HOM05D006325 ORTHO05D007878 2.5e-09 66.2 80 55.0
Thhalv10009295m.g Eutrema salsugineum HOM05D006325 ORTHO05D007878 2.5e-09 66.2 63 60.3
Lj4g0007216 Lotus japonicus HOM05D006325 ORTHO05D007878 2.5e-09 66.2 90 54.4
TWI09G0296 Tripterygium wilfordii HOM05D006325 ORTHO05D007878 2.5e-09 66.2 95 48.4
Gohir.A05G146600 Gossypium hirsutum HOM05D006325 ORTHO05D007878 4.3e-09 65.5 91 47.3
Medtr5g077680 Medicago truncatula HOM05D006325 ORTHO05D007878 4.3e-09 65.5 46 63.0
Medtr8g079458 Medicago truncatula HOM05D006325 ORTHO05D007878 4.3e-09 65.5 46 63.0
BcaB03g13839 Brassica carinata HOM05D006325 ORTHO05D007878 5.7e-09 65.1 85 48.2
Psat7g080360 Pisum sativum HOM05D006325 ORTHO05D007878 5.7e-09 65.1 93 41.9
Oeu030955.1 Olea europaea HOM05D006325 ORTHO05D007878 7.4e-09 64.7 38 78.9
Psat7g080320 Pisum sativum HOM05D006325 ORTHO05D007878 7.4e-09 64.7 92 43.5
TWI53G1846 Tripterygium wilfordii HOM05D006325 ORTHO05D007878 7.4e-09 64.7 95 45.3
COL.COLO4_31021 Corchorus olitorius HOM05D006325 ORTHO05D007878 9.7e-09 64.3 101 45.5
Medtr4g012020 Medicago truncatula HOM05D006325 ORTHO05D007878 1.3e-08 63.9 46 60.9
QL04p045922 Quercus lobata HOM05D006325 ORTHO05D007878 1.3e-08 63.9 53 58.5
CARHR029650 Cardamine hirsuta HOM05D006325 ORTHO05D007878 1.6e-08 63.5 50 62.0
ClCG01G024840 Citrullus lanatus HOM05D006325 ORTHO05D007878 2.8e-08 62.8 61 55.7
Medtr1437s0010 Medicago truncatula HOM05D006325 ORTHO05D007878 2.8e-08 62.8 46 58.7
Manes.15G124400 Manihot esculenta HOM05D006325 ORTHO05D007878 1.1e-07 60.8 41 63.4
Duzib160G0583 Durio zibethinus HOM05D006325 ORTHO05D007878 1.4e-07 60.5 52 57.7
Gohir.A06G139600 Gossypium hirsutum HOM05D006325 ORTHO05D007878 1.4e-07 60.5 53 62.3
Gohir.D06G144350 Gossypium hirsutum HOM05D006325 ORTHO05D007878 1.4e-07 60.5 39 71.8
Gorai.010G168000 Gossypium raimondii HOM05D006325 ORTHO05D007878 1.4e-07 60.5 39 71.8
Nn4g26622 Nelumbo nucifera HOM05D006325 ORTHO05D007878 2.4e-07 59.7 52 61.5
PSO541G2396 Papaver somniferum HOM05D006325 ORTHO05D007878 2.4e-07 59.7 98 39.8
Aa31LG6G5500 Aethionema arabicum HOM05D006325 ORTHO05D007878 3.1e-07 59.3 40 67.5
Gorai.011G047600 Gossypium raimondii HOM05D006325 ORTHO05D007878 4.1e-07 58.9 50 64.0
Gohir.A10G043400 Gossypium hirsutum HOM05D006325 ORTHO05D007878 9.0e-07 57.8 47 66.0
Gohir.D10G044600 Gossypium hirsutum HOM05D006325 ORTHO05D007878 9.0e-07 57.8 47 66.0
CsaV3_1G036810 Cucumis sativus L. HOM05D006325 ORTHO05D007878 1.2e-06 57.4 86 43.0
MBI18_g11235_MAGBIO Magnolia biondii HOM05D006325 ORTHO05D007878 2.6e-06 56.2 73 54.8
Sed0022207 Sechium edule HOM05D006325 ORTHO05D007878 2.6e-06 56.2 87 43.7
MELO3C002763.2 Cucumis melo HOM05D006325 ORTHO05D007878 5.9e-06 55.1 78 42.3


User provided reference genes

Program Settings