Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002611g0100 Nicotiana tabacum HOM05D006346 ORTHO05D007910 0.0e+00 1363.6 694 100.0
Nitab4.5_0003551g0040 Nicotiana tabacum HOM05D006346 ORTHO05D007910 0.0e+00 1290.4 709 93.4
Sopen07g001980 Solanum pennellii HOM05D006346 ORTHO05D007910 0.0e+00 1205.3 709 87.3
CAN.G160.15 Capsicum annuum HOM05D006346 ORTHO05D007910 0.0e+00 1181.4 710 86.1
Solyc07g005870.3 Solanum lycopersicum HOM05D006346 ORTHO05D007910 3.6e-310 1067.8 709 79.8
Peaxi162Scf00401g00218 Petunia axillaris HOM05D006346 ORTHO05D007910 2.8e-307 1058.1 708 79.9
Dinv42829 Davidia involucrata HOM05D006346 ORTHO05D007910 1.7e-288 995.7 696 73.7
Dinv43271 Davidia involucrata HOM05D006346 ORTHO05D007910 1.7e-288 995.7 696 73.7
Hma1.2p1_0028F.1_g017690 Hydrangea macrophylla HOM05D006346 ORTHO05D007910 1.7e-288 995.7 692 72.7
Atru.chr7.350 Acer truncatum HOM05D006346 ORTHO05D007910 8.3e-283 976.9 709 71.4
Lj9A719T56 Lonicera japonica HOM05D006346 ORTHO05D007910 1.9e-282 975.7 704 72.3
CSS0042716 Camellia sinensis var. sinensis HOM05D006346 ORTHO05D007910 3.5e-281 971.5 700 72.1
DCAR_019414 Daucus carota HOM05D006346 ORTHO05D007910 7.6e-276 953.7 693 70.7
Cfa020798 Carpinus fangiana HOM05D006346 ORTHO05D007910 2.2e-275 952.2 666 73.3
Cc06_g14630 Coffea canephora HOM05D006346 ORTHO05D007910 2.9e-275 951.8 712 70.6
MSTRG.6156 Avicennia marina HOM05D006346 ORTHO05D007910 1.9e-274 949.1 707 69.2
Potri.018G103700 Populus trichocarpa HOM05D006346 ORTHO05D007910 1.9e-274 949.1 666 72.1
Rhsim01G0026600 Rhododendron simsii HOM05D006346 ORTHO05D007910 1.2e-273 946.4 699 70.0
CiPaw.15G165500 Carya illinoinensis HOM05D006346 ORTHO05D007910 3.5e-273 944.9 687 71.5
QL02p093888 Quercus lobata HOM05D006346 ORTHO05D007910 2.3e-272 942.2 688 70.8
HanXRQChr10g0313691 Helianthus annuus HOM05D006346 ORTHO05D007910 6.6e-272 940.6 712 69.7
Thecc.09G152100 Theobroma cacao HOM05D006346 ORTHO05D007910 8.6e-272 940.3 664 72.4
Gohir.A04G059826 Gossypium hirsutum HOM05D006346 ORTHO05D007910 1.5e-271 939.5 699 69.7
Gorai.012G099000 Gossypium raimondii HOM05D006346 ORTHO05D007910 1.5e-271 939.5 699 69.5
COL.COLO4_23953 Corchorus olitorius HOM05D006346 ORTHO05D007910 9.6e-271 936.8 706 69.1
Gohir.D04G088700 Gossypium hirsutum HOM05D006346 ORTHO05D007910 1.2e-270 936.4 699 69.4
Lalb_Chr08g0234231 Lupinus albus HOM05D006346 ORTHO05D007910 1.8e-269 932.6 709 68.3
Prupe.7G265700 Prunus persica HOM05D006346 ORTHO05D007910 3.1e-269 931.8 685 70.7
Ciclev10007623m.g Citrus clementina HOM05D006346 ORTHO05D007910 5.8e-268 927.5 671 70.6
Sabra18G0089100 Salix brachista HOM05D006346 ORTHO05D007910 7.6e-268 927.2 750 65.2
RcHm_v2.0_Chr2g0085271 Rosa chinensis HOM05D006346 ORTHO05D007910 1.3e-267 926.4 666 70.9
Glyma.07G102300 Glycine max HOM05D006346 ORTHO05D007910 2.2e-267 925.6 704 67.8
Nn8g39991 Nelumbo nucifera HOM05D006346 ORTHO05D007910 2.9e-267 925.2 687 69.7
Lj6g0013256 Lotus japonicus HOM05D006346 ORTHO05D007910 3.8e-267 924.9 682 69.4
PSO063G0785 Papaver somniferum HOM05D006346 ORTHO05D007910 8.4e-267 923.7 699 68.4
FAN26G0534 Fragaria x ananassa HOM05D006346 ORTHO05D007910 2.4e-266 922.2 664 70.2
PSO782G0769 Papaver somniferum HOM05D006346 ORTHO05D007910 5.4e-266 921.0 701 69.2
vmacro16782 Vaccinium macrocarpon HOM05D006346 ORTHO05D007910 1.2e-265 919.8 690 69.3
FAN28G1995 Fragaria x ananassa HOM05D006346 ORTHO05D007910 2.1e-265 919.1 666 70.3
FvH4_1g00650 Fragaria vesca HOM05D006346 ORTHO05D007910 4.6e-265 917.9 666 70.3
THA.LOC104803912 Tarenaya hassleriana HOM05D006346 ORTHO05D007910 6.0e-265 917.5 702 68.8
Carub.0007s0978 Capsella rubella HOM05D006346 ORTHO05D007910 1.3e-264 916.4 724 67.3
CANSAT11G2498 Cannabis sativa HOM05D006346 ORTHO05D007910 1.7e-264 916.0 667 70.2
ECA234G1139 Erigeron canadensis HOM05D006346 ORTHO05D007910 2.3e-264 915.6 672 69.5
Oeu052219.3 Olea europaea HOM05D006346 ORTHO05D007910 3.9e-264 914.8 749 65.2
Migut.J01382 Erythranthe guttata HOM05D006346 ORTHO05D007910 5.1e-264 914.4 708 68.1
ClCG02G014350 Citrullus lanatus HOM05D006346 ORTHO05D007910 1.1e-263 913.3 722 67.3
PGR102G0252 Punica granatum HOM05D006346 ORTHO05D007910 1.1e-263 913.3 710 67.2
CsaV3_2G007650 Cucumis sativus L. HOM05D006346 ORTHO05D007910 1.5e-263 912.9 708 67.9
Sed0021167 Sechium edule HOM05D006346 ORTHO05D007910 1.5e-263 912.9 705 67.2
AL7G21400 Arabidopsis lyrata HOM05D006346 ORTHO05D007910 3.3e-263 911.8 713 67.6
Aqoxy7G03359 Aquilegia oxysepala HOM05D006346 ORTHO05D007910 2.8e-262 908.7 708 68.6
TWI34G0405 Tripterygium wilfordii HOM05D006346 ORTHO05D007910 2.8e-262 908.7 667 70.6
AT4G30720 Arabidopsis thaliana HOM05D006346 ORTHO05D007910 3.6e-262 908.3 712 67.1
Thhalv10024548m.g Eutrema salsugineum HOM05D006346 ORTHO05D007910 3.6e-262 908.3 669 70.7
BcaNung01563 Brassica carinata HOM05D006346 ORTHO05D007910 4.8e-262 907.9 665 71.0
GSVIVG01008451001 Vitis vinifera HOM05D006346 ORTHO05D007910 6.2e-262 907.5 695 69.8
Phvul.003G072700 Phaseolus vulgaris HOM05D006346 ORTHO05D007910 8.1e-262 907.1 670 69.1
BraA03t15070Z Brassica rapa HOM05D006346 ORTHO05D007910 1.4e-261 906.4 665 71.0
A03p60280 Brassica napus HOM05D006346 ORTHO05D007910 2.4e-261 905.6 665 70.8
Hund08940 Selenicereus undatus HOM05D006346 ORTHO05D007910 2.4e-261 905.6 721 66.6
BcaNung02744 Brassica carinata HOM05D006346 ORTHO05D007910 6.9e-261 904.0 665 71.1
C07p58190 Brassica napus HOM05D006346 ORTHO05D007910 6.9e-261 904.0 665 71.1
SGA_v2.0_scaffold45G17017 Striga asiatica HOM05D006346 ORTHO05D007910 9.0e-261 903.7 731 66.2
BolC7t46278H Brassica oleracea HOM05D006346 ORTHO05D007910 9.9e-260 900.2 665 70.5
Haze_19155 Corylus avellana HOM05D006346 ORTHO05D007910 9.9e-260 900.2 715 67.1
arahy.Tifrunner.gnm1.ann1.ID3JIZ Arachis hypogaea HOM05D006346 ORTHO05D007910 2.9e-259 898.7 704 67.3
Sp7g28630 Schrenkiella parvula HOM05D006346 ORTHO05D007910 8.4e-259 897.1 698 67.9
Aa31LG2G19630 Aethionema arabicum HOM05D006346 ORTHO05D007910 9.3e-258 893.6 700 66.7
EL10Ac8g18923 Beta vulgaris HOM05D006346 ORTHO05D007910 3.5e-257 891.7 722 66.2
Lsat_1_v5_gn_5_89421 Lactuca sativa HOM05D006346 ORTHO05D007910 6.0e-257 891.0 712 67.1
AUR62028356 Chenopodium quinoa HOM05D006346 ORTHO05D007910 5.1e-256 887.9 715 66.0
Medtr8g467050 Medicago truncatula HOM05D006346 ORTHO05D007910 2.5e-255 885.6 698 65.9
Actinidia38309 Actinidia chinensis HOM05D006346 ORTHO05D007910 1.1e-250 870.2 603 74.0
MELO3C004121.2 Cucumis melo HOM05D006346 ORTHO05D007910 9.3e-250 867.1 713 64.5
FAN23G2716 Fragaria x ananassa HOM05D006346 ORTHO05D007910 7.9e-249 864.0 656 67.7
Ca_22901_v3 Cicer arietinum L. HOM05D006346 ORTHO05D007910 5.3e-245 851.3 690 64.5
HPP92_020605 Vanilla planifolia HOM05D006346 ORTHO05D007910 6.0e-241 837.8 673 64.8
MD02G1005300 Malus domestica HOM05D006346 ORTHO05D007910 1.8e-240 836.3 588 72.6
Os05g0411200 Oryza sativa ssp. japonica HOM05D006346 ORTHO05D007910 2.6e-236 822.4 678 64.0
ATR0739G030 Amborella trichopoda HOM05D006346 ORTHO05D007910 6.5e-235 817.8 596 68.3
SalBow1G6401 Salvia bowleyana HOM05D006346 ORTHO05D007910 2.1e-233 812.8 574 72.3
CDE12G0948 Ceratophyllum demersum HOM05D006346 ORTHO05D007910 3.9e-232 808.5 687 64.2
Ah.09g228750 Amaranthus hybridus HOM05D006346 ORTHO05D007910 2.5e-226 789.3 696 60.6
arahy.Tifrunner.gnm1.ann1.VMKR8Z Arachis hypogaea HOM05D006346 ORTHO05D007910 1.6e-225 786.6 626 66.6
unitig_37.g12649 Utricularia gibba HOM05D006346 ORTHO05D007910 3.9e-224 781.9 632 65.7
Sc14g0000950 Simmondsia chinensis HOM05D006346 ORTHO05D007910 7.4e-223 777.7 613 68.0
Zm00001eb288040 Zea mays HOM05D006346 ORTHO05D007910 1.8e-221 773.1 645 62.2
Psat4g134640 Pisum sativum HOM05D006346 ORTHO05D007910 2.8e-214 749.2 616 63.6
Manes.14G142800 Manihot esculenta HOM05D006346 ORTHO05D007910 8.5e-211 737.6 577 66.0
TPR.G10032 Trifolium pratense HOM05D006346 ORTHO05D007910 1.1e-186 657.5 1276 36.4
SMO146G0018 Selaginella moellendorffii HOM05D006346 ORTHO05D007910 1.6e-180 637.1 621 55.1
Pp3c23_14180 Physcomitrium patens HOM05D006346 ORTHO05D007910 1.2e-177 627.5 624 54.5
Mapoly0021s0085 Marchantia polymorpha HOM05D006346 ORTHO05D007910 9.8e-175 617.8 652 53.8
AagrBONN_evm.TU.Sc2ySwM_344.1120 Anthoceros agrestis HOM05D006346 ORTHO05D007910 3.5e-172 609.4 648 52.8
Hma1.2p1_0028F.1_g017700 Hydrangea macrophylla HOM05D006346 ORTHO05D007910 1.6e-169 600.5 440 70.2
Cpa.g.sc46.182 Carica papaya HOM05D006346 ORTHO05D007910 3.9e-155 552.7 401 70.1
Glyma.04G155100 Glycine max HOM05D006346 ORTHO05D007910 1.1e-152 544.7 402 67.4
TAR383G0381 Trochodendron aralioides HOM05D006346 ORTHO05D007910 2.1e-137 493.8 411 64.5
CAN.G160.19 Capsicum annuum HOM05D006346 ORTHO05D007910 5.5e-125 452.6 454 58.4
Cre17.g744997 Chlamydomonas reinhardtii HOM05D006346 ORTHO05D007910 2.1e-124 450.7 727 40.7
MCO14G279 Micromonas commoda HOM05D006346 ORTHO05D007910 1.5e-122 444.5 472 50.0
PRCOL_00000449 Prasinoderma coloniale HOM05D006346 ORTHO05D007910 9.7e-122 441.8 605 45.0
Eucgr.C02507 Eucalyptus grandis HOM05D006346 ORTHO05D007910 2.2e-118 430.6 334 67.4
VMungo0251G1020 Vigna mungo HOM05D006346 ORTHO05D007910 2.7e-116 423.7 273 75.1
PGSC0003DMG400011203 Solanum tuberosum HOM05D006346 ORTHO05D007910 1.2e-100 371.7 203 93.6
TAR383G0466 Trochodendron aralioides HOM05D006346 ORTHO05D007910 1.7e-97 361.3 225 80.9
Eucgr.C02508 Eucalyptus grandis HOM05D006346 ORTHO05D007910 4.5e-95 353.2 266 69.9
AUR62025356 Chenopodium quinoa HOM05D006346 ORTHO05D007910 4.2e-93 346.7 319 59.9
Cpa.g.sc46.183 Carica papaya HOM05D006346 ORTHO05D007910 1.1e-85 322.0 274 63.5
Actinidia24372 Actinidia chinensis HOM05D006346 ORTHO05D007910 8.8e-83 312.4 609 36.9
CARHR238600 Cardamine hirsuta HOM05D006346 ORTHO05D007910 8.3e-81 305.8 285 57.5
AUR62025355 Chenopodium quinoa HOM05D006346 ORTHO05D007910 1.6e-79 301.6 203 73.9
FAN23G0300 Fragaria x ananassa HOM05D006346 ORTHO05D007910 4.0e-59 233.8 155 72.9
CAN.G1961.3 Capsicum annuum HOM05D006346 ORTHO05D007910 1.7e-54 218.4 203 65.0
SEGI_02941 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 1.4e-48 198.7 157 66.9
Glyma.04G155150 Glycine max HOM05D006346 ORTHO05D007910 1.2e-44 185.7 148 64.2
SEGI_30041 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 5.3e-35 153.7 103 70.9
MD15G1149600 Malus domestica HOM05D006346 ORTHO05D007910 1.7e-30 138.7 165 49.1
SalBow1G2918 Salvia bowleyana HOM05D006346 ORTHO05D007910 2.8e-28 131.3 143 52.4
Glyma.04G155200 Glycine max HOM05D006346 ORTHO05D007910 1.9e-21 108.6 131 51.9
SEGI_23921 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 3.3e-21 107.8 125 46.4
Rhsim01G0141500 Rhododendron simsii HOM05D006319 ORTHO05D007963 3.4e-18 97.8 166 44.0
HanXRQChr01g0001911 Helianthus annuus HOM05D006346 ORTHO05D007910 4.2e-16 90.9 53 75.5
ECA238G2318 Erigeron canadensis HOM05D006346 ORTHO05D007910 6.7e-14 83.6 83 55.4
A05p44400 Brassica napus HOM05D034890 ORTHO05D100541 1.2e-10 72.8 69 53.6


User provided reference genes

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