Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002610g0040 Nicotiana tabacum HOM05D014538 ORTHO05D016184 3.8e-302 1040.8 564 100.0
Nitab4.5_0000632g0130 Nicotiana tabacum HOM05D014538 ORTHO05D016184 1.8e-163 580.1 359 79.1
Peaxi162Scf00020g00816 Petunia axillaris HOM05D014538 ORTHO05D016184 1.3e-76 291.6 398 47.5
Peaxi162Scf00020g00082 Petunia axillaris HOM05D014538 ORTHO05D016184 2.0e-72 277.7 406 46.8
CAN.G534.19 Capsicum annuum HOM05D014538 ORTHO05D016184 2.6e-72 277.3 252 61.1
Nitab4.5_0006018g0080 Nicotiana tabacum HOM05D014538 ORTHO05D016184 1.3e-71 275.0 392 46.4
Nitab4.5_0000962g0060 Nicotiana tabacum HOM05D014538 ORTHO05D016184 5.9e-69 266.2 403 46.4
Solyc11g007360.1 Solanum lycopersicum HOM05D014538 ORTHO05D016184 1.6e-50 204.9 212 54.2
Nitab4.5_0000583g0250 Nicotiana tabacum HOM05D014538 ORTHO05D016184 1.5e-40 171.8 246 45.1
Nitab4.5_0005390g0080 Nicotiana tabacum HOM05D014538 ORTHO05D016184 1.2e-26 125.6 124 62.9
Oeu007964.1 Olea europaea HOM05D000171 ORTHO05D016184 1.7e-20 105.1 286 32.2
RhsimUnG0241000 Rhododendron simsii HOM05D015868 ORTHO05D013379 8.9e-17 92.8 320 32.5
RhsimUnG0240800 Rhododendron simsii HOM05D015868 ORTHO05D013379 7.6e-16 89.7 312 31.4
Rhsim05G0020000 Rhododendron simsii HOM05D015868 ORTHO05D013379 7.8e-13 79.7 296 29.1
Aa31LG6G10790 Aethionema arabicum HOM05D000171 ORTHO05D000101 1.7e-12 78.6 251 29.1
Dinv16551 Davidia involucrata HOM05D000171 ORTHO05D000101 3.6e-10 70.9 211 28.4
Rhsim02G0013700 Rhododendron simsii HOM05D000404 ORTHO05D005791 1.4e-09 68.9 315 28.3
BcaC07g40211 Brassica carinata HOM05D000171 ORTHO05D000101 3.1e-09 67.8 239 28.5
Dinv16552 Davidia involucrata HOM05D000171 ORTHO05D000101 3.1e-09 67.8 249 26.5
QL03p068360 Quercus lobata HOM05D037156 ORTHO05D011511 1.2e-08 65.9 273 26.0
Dinv16550 Davidia involucrata HOM05D000171 ORTHO05D000101 5.8e-08 63.5 213 28.2
Thhalv10012082m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 5.8e-08 63.5 235 25.1
A09p51160 Brassica napus HOM05D000171 ORTHO05D000101 7.6e-08 63.2 241 27.0
BraA03t10159Z Brassica rapa HOM05D000171 ORTHO05D000101 7.6e-08 63.2 167 28.1
BraA09t40560Z Brassica rapa HOM05D000171 ORTHO05D000101 7.6e-08 63.2 241 27.0
Thhalv10011995m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 7.6e-08 63.2 235 25.5
A04p24680 Brassica napus HOM05D000171 ORTHO05D000101 9.9e-08 62.8 248 24.6
Thhalv10012093m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 9.9e-08 62.8 235 25.5
BcaC02g07924 Brassica carinata HOM05D000171 ORTHO05D000101 1.3e-07 62.4 248 25.0
C04p61900 Brassica napus HOM05D000171 ORTHO05D000101 1.3e-07 62.4 248 25.0
BcaB02g10437 Brassica carinata HOM05D000171 ORTHO05D000101 1.7e-07 62.0 336 26.5
C08p06400 Brassica napus HOM05D000171 ORTHO05D000101 1.7e-07 62.0 292 27.1
BolC8t47486H Brassica oleracea HOM05D000171 ORTHO05D000101 1.7e-07 62.0 292 27.1
C08p33960 Brassica napus HOM05D000171 ORTHO05D000101 2.9e-07 61.2 240 27.1
Medtr2g028160 Medicago truncatula HOM05D000007 ORTHO05D000017 2.9e-07 61.2 236 27.5
C03p85560 Brassica napus HOM05D000171 ORTHO05D000101 6.4e-07 60.1 225 27.6
BolC3t20844H Brassica oleracea HOM05D000171 ORTHO05D000101 6.4e-07 60.1 225 27.6
BcaC07g37220 Brassica carinata HOM05D000171 ORTHO05D000101 8.4e-07 59.7 292 27.1
BolC8t50994H Brassica oleracea HOM05D000171 ORTHO05D000101 1.1e-06 59.3 240 26.7
Rhsim05G0019600 Rhododendron simsii HOM05D015868 ORTHO05D013379 1.1e-06 59.3 135 34.8
BraA04t17999Z Brassica rapa HOM05D000171 ORTHO05D000101 1.4e-06 58.9 241 25.7
Sabra16G0310700 Salix brachista HOM05D000007 ORTHO05D000101 1.4e-06 58.9 256 26.6
A04p24820 Brassica napus HOM05D000171 ORTHO05D000101 1.9e-06 58.5 241 25.7
C04p61570 Brassica napus HOM05D000171 ORTHO05D000101 1.9e-06 58.5 218 27.1
AL1G45610 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 3.2e-06 57.8 287 26.5
Aa31LG1G19670 Aethionema arabicum HOM05D000171 ORTHO05D000101 4.2e-06 57.4 227 26.9
BcaB06g28549 Brassica carinata HOM05D000171 ORTHO05D000101 4.2e-06 57.4 249 23.3
A04p24670 Brassica napus HOM05D000171 ORTHO05D000101 4.2e-06 57.4 218 27.1
Aa31LG6G10890 Aethionema arabicum HOM05D000171 ORTHO05D000101 5.4e-06 57.0 237 26.2
Dinv38240 Davidia involucrata HOM05D000171 ORTHO05D000101 5.4e-06 57.0 249 26.9
Sc14g0007620 Simmondsia chinensis HOM05D000171 ORTHO05D051015 5.4e-06 57.0 166 28.3


User provided reference genes

Program Settings