Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002604g0070 Nicotiana tabacum HOM05D008024 ORTHO05D010405 5.0e-170 601.3 363 100.0
Nitab4.5_0001333g0030 Nicotiana tabacum HOM05D008024 ORTHO05D010405 2.5e-113 412.9 371 77.1
Nitab4.5_0001070g0140 Nicotiana tabacum HOM05D008024 ORTHO05D010405 5.8e-94 348.6 362 67.7
Nitab4.5_0001427g0050 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.6e-91 340.5 287 76.0
Nitab4.5_0006834g0020 Nicotiana tabacum HOM05D008024 ORTHO05D010405 3.1e-87 326.2 362 62.2
Nitab4.5_0000520g0030 Nicotiana tabacum HOM05D008024 ORTHO05D010405 3.2e-84 316.2 352 69.0
Nitab4.5_0005327g0020 Nicotiana tabacum HOM05D008024 ORTHO05D010405 2.7e-83 313.2 271 77.9
Nitab4.5_0026777g0010 Nicotiana tabacum HOM05D008024 ORTHO05D010405 7.4e-81 305.1 258 82.9
Nitab4.5_0000686g0200 Nicotiana tabacum HOM05D008024 ORTHO05D010405 7.6e-78 295.0 271 74.2
Nitab4.5_0004968g0020 Nicotiana tabacum HOM05D008024 ORTHO05D010405 7.6e-78 295.0 254 81.1
Nitab4.5_0002437g0030 Nicotiana tabacum HOM05D008024 ORTHO05D010405 3.8e-77 292.7 255 81.6
Nitab4.5_0000127g0130 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.3e-74 284.3 260 63.5
Nitab4.5_0002210g0090 Nicotiana tabacum HOM05D008024 ORTHO05D010405 2.3e-74 283.5 251 77.3
Nitab4.5_0001507g0110 Nicotiana tabacum HOM05D008024 ORTHO05D010405 3.9e-74 282.7 271 63.8
Nitab4.5_0006018g0070 Nicotiana tabacum HOM05D008024 ORTHO05D010405 3.7e-72 276.2 352 61.9
Nitab4.5_0004469g0110 Nicotiana tabacum HOM05D008024 ORTHO05D010405 5.1e-66 255.8 132 94.7
Nitab4.5_0011075g0030 Nicotiana tabacum HOM05D008024 ORTHO05D010405 5.1e-66 255.8 132 94.7
Nitab4.5_0002789g0060 Nicotiana tabacum HOM05D008024 ORTHO05D010405 8.8e-66 255.0 132 95.5
Nitab4.5_0002710g0040 Nicotiana tabacum HOM05D008024 ORTHO05D010405 2.2e-64 250.4 132 93.2
Nitab4.5_0005160g0090 Nicotiana tabacum HOM05D008024 ORTHO05D010405 2.4e-63 246.9 132 93.2
Nitab4.5_0000197g0140 Nicotiana tabacum HOM05D008024 ORTHO05D010405 4.1e-63 246.1 132 93.2
Nitab4.5_0013419g0020 Nicotiana tabacum HOM05D008024 ORTHO05D010405 3.4e-62 243.0 266 54.9
Nitab4.5_0009338g0010 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.6e-59 234.2 127 90.6
Nitab4.5_0001650g0090 Nicotiana tabacum HOM05D008024 ORTHO05D010405 6.3e-56 222.2 225 66.7
Nitab4.5_0003987g0030 Nicotiana tabacum HOM05D008024 ORTHO05D010405 3.5e-54 216.5 122 86.1
Nitab4.5_0002330g0050 Nicotiana tabacum HOM05D008024 ORTHO05D010405 2.2e-53 213.8 320 50.9
Nitab4.5_0000023g0750 Nicotiana tabacum HOM05D008024 ORTHO05D010405 3.2e-52 209.9 345 42.0
Nitab4.5_0000144g0100 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.6e-51 207.6 347 50.1
Nitab4.5_0003780g0140 Nicotiana tabacum HOM05D008024 ORTHO05D010405 6.1e-51 205.7 298 49.7
Nitab4.5_0009681g0040 Nicotiana tabacum HOM05D008024 ORTHO05D010405 9.1e-47 191.8 298 45.6
Nitab4.5_0001162g0020 Nicotiana tabacum HOM05D008024 ORTHO05D010405 2.0e-41 174.1 219 55.3
Nitab4.5_0003998g0070 Nicotiana tabacum HOM05D008024 ORTHO05D010405 2.9e-37 160.2 344 42.4
Nitab4.5_0000256g0010 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.1e-36 158.3 226 53.1
Nitab4.5_0000485g0020 Nicotiana tabacum HOM05D008024 ORTHO05D010405 2.2e-32 144.1 87 80.5
Nitab4.5_0008256g0010 Nicotiana tabacum HOM05D008024 ORTHO05D010405 3.7e-32 143.3 242 47.5
Nitab4.5_0004704g0070 Nicotiana tabacum HOM05D008024 ORTHO05D010405 5.4e-31 139.4 231 41.6
Nitab4.5_0001474g0100 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.2e-30 138.3 200 63.5
Nitab4.5_0007824g0010 Nicotiana tabacum HOM05D008024 ORTHO05D010405 4.2e-28 129.8 76 84.2
Nitab4.5_0013343g0010 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.2e-27 128.3 68 92.6
Nitab4.5_0000309g0260 Nicotiana tabacum HOM05D008024 ORTHO05D010405 3.6e-27 126.7 177 50.8
Nitab4.5_0000909g0060 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.4e-26 124.8 88 77.3
Nitab4.5_0002145g0040 Nicotiana tabacum HOM05D008024 ORTHO05D010405 2.8e-24 117.1 68 85.3
Nitab4.5_0000620g0250 Nicotiana tabacum HOM05D008024 ORTHO05D010405 4.9e-24 116.3 68 85.3
Nitab4.5_0002710g0060 Nicotiana tabacum HOM05D008024 ORTHO05D010405 2.4e-23 114.0 68 86.8
Nitab4.5_0002628g0070 Nicotiana tabacum HOM05D008024 ORTHO05D010405 2.7e-22 110.5 241 36.1
Nitab4.5_0004758g0050 Nicotiana tabacum HOM05D008024 ORTHO05D010405 4.5e-22 109.8 207 39.6
Nitab4.5_0000485g0040 Nicotiana tabacum HOM05D008024 ORTHO05D010405 5.9e-22 109.4 68 79.4
Nitab4.5_0006908g0020 Nicotiana tabacum HOM05D008024 ORTHO05D283358 2.3e-21 107.5 60 85.0
Nitab4.5_0007325g0030 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.5e-20 104.8 208 37.5
Nitab4.5_0004340g0090 Nicotiana tabacum HOM05D008024 ORTHO05D010405 3.3e-20 103.6 187 46.0
Nitab4.5_0001772g0120 Nicotiana tabacum HOM05D008024 ORTHO05D010405 7.3e-20 102.4 87 62.1
Nitab4.5_0000167g0210 Nicotiana tabacum HOM05D008024 ORTHO05D283106 3.6e-19 100.1 60 81.7
Nitab4.5_0004505g0030 Nicotiana tabacum HOM05D008024 ORTHO05D010405 8.0e-19 99.0 160 37.5
Nitab4.5_0009386g0030 Nicotiana tabacum HOM05D008024 ORTHO05D010405 4.0e-18 96.7 192 45.8
Nitab4.5_0004670g0060 Nicotiana tabacum HOM05D008024 ORTHO05D010405 9.8e-17 92.0 189 40.2
Nitab4.5_0000779g0040 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.7e-16 91.3 200 39.0
Nitab4.5_0001644g0040 Nicotiana tabacum HOM05D008024 ORTHO05D282967 6.4e-16 89.4 92 62.0
Nitab4.5_0001151g0120 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.1e-15 88.6 68 64.7
Nitab4.5_0004968g0030 Nicotiana tabacum HOM05D008024 ORTHO05D282526 1.1e-15 88.6 49 81.6
Nitab4.5_0002710g0050 Nicotiana tabacum HOM05D008024 ORTHO05D285352 1.4e-15 88.2 55 76.4
Nitab4.5_0004779g0030 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.9e-15 87.8 204 34.3
Nitab4.5_0003918g0070 Nicotiana tabacum HOM05D008024 ORTHO05D282470 5.4e-15 86.3 43 88.4
PGSC0003DMG400001699 Solanum tuberosum HOM05D004064 ORTHO05D009909 1.2e-14 85.1 311 42.8
PGSC0003DMG400045086 Solanum tuberosum HOM05D004064 ORTHO05D009909 1.6e-14 84.7 280 30.7
Nitab4.5_0006241g0050 Nicotiana tabacum HOM05D008024 ORTHO05D010405 2.3e-13 80.9 132 40.2
Nitab4.5_0000216g0350 Nicotiana tabacum HOM05D008024 ORTHO05D010405 6.6e-13 79.3 68 60.3
Nitab4.5_0002191g0010 Nicotiana tabacum HOM05D008024 ORTHO05D010405 8.6e-13 79.0 39 84.6
Nitab4.5_0009937g0030 Nicotiana tabacum HOM05D006921 ORTHO05D009185 1.2e-11 75.1 381 26.8
PGSC0003DMG400012698 Solanum tuberosum HOM05D004064 ORTHO05D009909 6.2e-11 72.8 435 31.0
Nitab4.5_0008075g0060 Nicotiana tabacum HOM05D006921 ORTHO05D009185 1.8e-10 71.2 270 27.4
PGSC0003DMG400043109 Solanum tuberosum HOM05D004064 ORTHO05D009909 2.3e-10 70.9 106 42.5
Sopen05g012050 Solanum pennellii HOM05D000017 ORTHO05D000013 5.2e-10 69.7 101 40.6
Sopen12g005860 Solanum pennellii HOM05D000017 ORTHO05D000013 6.8e-10 69.3 101 40.6
Nitab4.5_0004174g0060 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.5e-09 68.2 43 76.7
Sopen08g001370 Solanum pennellii HOM05D000017 ORTHO05D000013 2.6e-09 67.4 99 40.4
Sopen12g026480 Solanum pennellii HOM05D000017 ORTHO05D009561 2.6e-09 67.4 103 39.8
CAN.G127.19 Capsicum annuum HOM05D004064 ORTHO05D009909 3.4e-09 67.0 106 40.6
Nitab4.5_0007771g0020 Nicotiana tabacum HOM05D004064 ORTHO05D009909 5.8e-09 66.2 135 32.6
Sopen06g017430 Solanum pennellii HOM05D000017 ORTHO05D000013 5.8e-09 66.2 102 40.2
Sopen01g016940 Solanum pennellii HOM05D004064 ORTHO05D009909 7.5e-09 65.9 106 40.6
Sopen05g012450 Solanum pennellii HOM05D000017 ORTHO05D009561 7.5e-09 65.9 282 26.2
Peaxi162Scf00288g01114 Petunia axillaris HOM05D006921 ORTHO05D009185 1.7e-08 64.7 97 36.1
Sopen09g020850 Solanum pennellii HOM05D006921 ORTHO05D009185 1.7e-08 64.7 268 26.9
Peaxi162Scf00086g00199 Petunia axillaris HOM05D006921 ORTHO05D009185 2.9e-08 63.9 97 35.1
Peaxi162Scf00136g01915 Petunia axillaris HOM05D006921 ORTHO05D009185 2.9e-08 63.9 97 35.1
Nitab4.5_0001926g0090 Nicotiana tabacum HOM05D008024 ORTHO05D010405 3.7e-08 63.5 47 68.1
Peaxi162Scf00591g00515 Petunia axillaris HOM05D006921 ORTHO05D009185 3.7e-08 63.5 127 33.9
Peaxi162Scf00062g00106 Petunia axillaris HOM05D006921 ORTHO05D009185 1.9e-07 61.2 97 34.0
Peaxi162Scf00087g00098 Petunia axillaris HOM05D006921 ORTHO05D009185 1.9e-07 61.2 97 34.0
Nitab4.5_0007719g0030 Nicotiana tabacum HOM05D008024 ORTHO05D285186 2.4e-07 60.8 64 51.6
Sopen03g028020 Solanum pennellii HOM05D004064 ORTHO05D009909 2.4e-07 60.8 101 38.6
Nitab4.5_0000485g0030 Nicotiana tabacum HOM05D008024 ORTHO05D285458 4.1e-07 60.1 36 72.2
Sopen09g007310 Solanum pennellii HOM05D000017 ORTHO05D009185 4.1e-07 60.1 280 23.6
Nitab4.5_0002403g0020 Nicotiana tabacum HOM05D006921 ORTHO05D009185 5.4e-07 59.7 113 31.9
Sopen11g013980 Solanum pennellii HOM05D000017 ORTHO05D009561 5.4e-07 59.7 278 30.6
Nitab4.5_0009261g0010 Nicotiana tabacum HOM05D006921 ORTHO05D009185 7.0e-07 59.3 240 27.1
Nitab4.5_0003470g0040 Nicotiana tabacum HOM05D006921 ORTHO05D009185 1.6e-06 58.2 113 33.6
PGSC0003DMG400035494 Solanum tuberosum HOM05D004064 ORTHO05D009909 1.6e-06 58.2 102 33.3
Peaxi162Scf00089g00005 Petunia axillaris HOM05D000017 ORTHO05D001349 2.1e-06 57.8 127 33.1
Sopen03g024100 Solanum pennellii HOM05D004064 ORTHO05D009909 2.1e-06 57.8 278 36.0
Sopen10g015440 Solanum pennellii HOM05D010431 ORTHO05D010855 2.7e-06 57.4 126 28.6
PGSC0003DMG400038860 Solanum tuberosum HOM05D004064 ORTHO05D011910 2.7e-06 57.4 279 26.9
Nitab4.5_0006105g0030 Nicotiana tabacum HOM05D000017 ORTHO05D001349 4.6e-06 56.6 269 26.8
Nitab4.5_0012245g0060 Nicotiana tabacum HOM05D003329 ORTHO05D011659 7.8e-06 55.8 117 29.1
Solyc04g039737.1 Solanum lycopersicum HOM05D004064 ORTHO05D009909 7.8e-06 55.8 96 35.4
Sopen04g011640 Solanum pennellii HOM05D004064 ORTHO05D009909 7.8e-06 55.8 298 29.2


User provided reference genes

Program Settings