Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002598g0070 Nicotiana tabacum HOM05D007350 ORTHO05D009323 5.5e-84 314.3 163 100.0
Nitab4.5_0005221g0020 Nicotiana tabacum HOM05D007350 ORTHO05D009323 3.7e-72 275.0 163 87.7
Solyc05g050720.4 Solanum lycopersicum HOM05D007350 ORTHO05D009323 6.1e-59 231.1 163 77.3
Sopen05g029130 Solanum pennellii HOM05D007350 ORTHO05D009323 8.8e-58 227.3 163 76.1
CAN.G112.14 Capsicum annuum HOM05D007350 ORTHO05D009323 6.3e-56 221.1 163 76.7
PGSC0003DMG400006999 Solanum tuberosum HOM05D007350 ORTHO05D009323 5.0e-45 184.9 125 75.2
Peaxi162Scf00003g01820 Petunia axillaris HOM05D007350 ORTHO05D009323 3.3e-28 129.0 98 67.3
Cc09_g10330 Coffea canephora HOM05D007350 ORTHO05D009323 4.0e-26 122.1 166 51.2
Oeu025102.1 Olea europaea HOM05D007350 ORTHO05D009323 2.4e-23 112.8 106 64.2
CsaV3_7G001160 Cucumis sativus L. HOM05D007350 ORTHO05D009323 5.4e-23 111.7 151 47.7
TWI79G1045 Tripterygium wilfordii HOM05D007350 ORTHO05D009323 1.2e-22 110.5 165 47.9
GSVIVG01023973001 Vitis vinifera HOM05D007350 ORTHO05D009323 1.2e-22 110.5 154 44.8
MD10G1127900 Malus domestica HOM05D007350 ORTHO05D009323 2.0e-22 109.8 111 55.0
Migut.B01238 Erythranthe guttata HOM05D007350 ORTHO05D009323 3.5e-22 109.0 128 51.6
Aqoxy3G04007 Aquilegia oxysepala HOM05D007350 ORTHO05D009323 7.8e-22 107.8 160 43.8
MSTRG.20506 Avicennia marina HOM05D007350 ORTHO05D009323 7.8e-22 107.8 125 49.6
Ciclev10029452m.g Citrus clementina HOM05D007350 ORTHO05D009323 7.8e-22 107.8 158 47.5
Actinidia18040 Actinidia chinensis HOM05D007350 ORTHO05D009323 1.0e-21 107.5 145 46.9
MELO3C013337.2 Cucumis melo HOM05D007350 ORTHO05D009323 1.3e-21 107.1 92 65.2
Prupe.8G169100 Prunus persica HOM05D007350 ORTHO05D009323 1.3e-21 107.1 118 53.4
Rhsim03G0180300 Rhododendron simsii HOM05D007350 ORTHO05D009323 2.9e-21 105.9 146 45.9
ClCG02G003950 Citrullus lanatus HOM05D007350 ORTHO05D009323 6.6e-21 104.8 138 48.6
Sc08g0002720 Simmondsia chinensis HOM05D007350 ORTHO05D009323 8.6e-21 104.4 140 46.4
Nn4g24553 Nelumbo nucifera HOM05D007350 ORTHO05D009323 2.5e-20 102.8 158 43.0
Manes.04G071000 Manihot esculenta HOM05D007350 ORTHO05D009323 4.3e-20 102.1 151 43.7
RcHm_v2.0_Chr6g0278921 Rosa chinensis HOM05D007350 ORTHO05D009323 4.3e-20 102.1 93 60.2
Carub.0007s0037 Capsella rubella HOM05D007350 ORTHO05D009323 5.6e-20 101.7 153 41.8
Cpa.g.sc20.115 Carica papaya HOM05D007350 ORTHO05D009323 5.6e-20 101.7 123 50.4
Hma1.2p1_0032F.1_g019200 Hydrangea macrophylla HOM05D007350 ORTHO05D009323 7.3e-20 101.3 108 54.6
Actinidia20526 Actinidia chinensis HOM05D007350 ORTHO05D009323 9.5e-20 100.9 153 43.8
PSO782G4816 Papaver somniferum HOM05D007350 ORTHO05D009323 1.6e-19 100.1 160 39.4
Haze_02104 Corylus avellana HOM05D007350 ORTHO05D009323 4.7e-19 98.6 158 42.4
QL11p052353 Quercus lobata HOM05D007350 ORTHO05D009323 6.1e-19 98.2 77 67.5
AUR62010011 Chenopodium quinoa HOM05D007350 ORTHO05D009323 8.0e-19 97.8 81 63.0
COL.COLO4_17379 Corchorus olitorius HOM05D007350 ORTHO05D009323 8.0e-19 97.8 122 48.4
FvH4_2g15660 Fragaria vesca HOM05D007350 ORTHO05D009323 8.0e-19 97.8 118 49.2
FAN24G2045 Fragaria x ananassa HOM05D007350 ORTHO05D009323 8.0e-19 97.8 122 46.7
Sabra04G0119700 Salix brachista HOM05D007350 ORTHO05D009323 8.0e-19 97.8 87 63.2
Sed0025246 Sechium edule HOM05D007350 ORTHO05D009323 8.0e-19 97.8 93 61.3
SGA_v2.0_scaffold124G33608 Striga asiatica HOM05D007350 ORTHO05D009323 8.0e-19 97.8 166 42.8
PSO063G0872 Papaver somniferum HOM05D007350 ORTHO05D009323 1.0e-18 97.4 160 39.4
CiPaw.05G085400 Carya illinoinensis HOM05D007350 ORTHO05D009323 1.4e-18 97.1 136 43.4
FAN27G1653 Fragaria x ananassa HOM05D007350 ORTHO05D009323 1.8e-18 96.7 93 57.0
Potri.004G177800 Populus trichocarpa HOM05D007350 ORTHO05D009323 1.8e-18 96.7 87 63.2
MBI19_g01918_MAGBIO Magnolia biondii HOM05D007350 ORTHO05D009323 3.1e-18 95.9 121 47.1
arahy.Tifrunner.gnm1.ann1.7M0RFB Arachis hypogaea HOM05D007350 ORTHO05D009323 4.0e-18 95.5 76 64.5
Duzib052G1005 Durio zibethinus HOM05D007350 ORTHO05D009323 4.0e-18 95.5 129 45.7
Psat1g060320 Pisum sativum HOM05D007350 ORTHO05D009323 4.0e-18 95.5 101 51.5
Hma1.2p1_0032F.1_g019210 Hydrangea macrophylla HOM05D007350 ORTHO05D009323 5.2e-18 95.1 64 79.7
FAN15G0854 Fragaria x ananassa HOM05D007350 ORTHO05D009323 6.8e-18 94.7 93 57.0
RcHm_v2.0_Chr6g0278901 Rosa chinensis HOM05D007350 ORTHO05D009323 6.8e-18 94.7 121 46.3
CANSAT78G0569 Cannabis sativa HOM05D007350 ORTHO05D009323 1.2e-17 94.0 124 48.4
AUR62013001 Chenopodium quinoa HOM05D007350 ORTHO05D009323 1.2e-17 94.0 80 61.2
Hund16245 Selenicereus undatus HOM05D007350 ORTHO05D009323 1.2e-17 94.0 81 60.5
Thecc.02G055300 Theobroma cacao HOM05D007350 ORTHO05D009323 1.2e-17 94.0 77 63.6
Ca_04216_v3 Cicer arietinum L. HOM05D007350 ORTHO05D009323 1.5e-17 93.6 101 49.5
TPR.G2262 Trifolium pratense HOM05D007350 ORTHO05D009323 1.5e-17 93.6 161 40.4
PGR042G2321 Punica granatum HOM05D007350 ORTHO05D009323 2.6e-17 92.8 160 40.6
AT4G38490 Arabidopsis thaliana HOM05D007350 ORTHO05D009323 3.4e-17 92.4 150 42.0
Phvul.004G019500 Phaseolus vulgaris HOM05D007350 ORTHO05D009323 3.4e-17 92.4 148 41.2
Lsat_1_v5_gn_4_72021 Lactuca sativa HOM05D007350 ORTHO05D009323 4.4e-17 92.0 99 52.5
Aa31LG6G16700 Aethionema arabicum HOM05D005203 ORTHO05D006383 5.8e-17 91.7 151 38.4
AL7G10350 Arabidopsis lyrata HOM05D007350 ORTHO05D009323 7.5e-17 91.3 148 39.9
CDE05G3477 Ceratophyllum demersum HOM05D007350 ORTHO05D009323 9.8e-17 90.9 71 64.8
Lalb_Chr02g0159761 Lupinus albus HOM05D007350 ORTHO05D009323 1.3e-16 90.5 100 53.0
Sp7g37290 Schrenkiella parvula HOM05D007350 ORTHO05D009323 1.3e-16 90.5 159 39.0
unitig_749.g14334 Utricularia gibba HOM05D000730 ORTHO05D000578 1.3e-16 90.5 108 48.1
TAR374G1157 Trochodendron aralioides HOM05D007350 ORTHO05D009323 1.7e-16 90.1 102 51.0
Lj2g0024385 Lotus japonicus HOM05D007350 ORTHO05D009323 2.2e-16 89.7 74 62.2
CARHR294210 Cardamine hirsuta HOM05D007350 ORTHO05D009323 2.9e-16 89.4 155 36.8
Eucgr.G01372 Eucalyptus grandis HOM05D007350 ORTHO05D009323 6.4e-16 88.2 88 56.8
Glyma.13G070400 Glycine max HOM05D007350 ORTHO05D009323 8.3e-16 87.8 104 51.0
Gohir.A03G205900 Gossypium hirsutum HOM05D007350 ORTHO05D009323 1.1e-15 87.4 110 49.1
Gohir.D02G227300 Gossypium hirsutum HOM05D007350 ORTHO05D009323 1.1e-15 87.4 110 49.1
Gorai.005G255200 Gossypium raimondii HOM05D007350 ORTHO05D009323 1.1e-15 87.4 110 49.1
VMungo0464G1538 Vigna mungo HOM05D007350 ORTHO05D009323 1.1e-15 87.4 76 59.2
Glyma.19G012500 Glycine max HOM05D007350 ORTHO05D009323 1.4e-15 87.0 98 51.0
Medtr6g007793 Medicago truncatula HOM05D007350 ORTHO05D009323 1.4e-15 87.0 101 47.5
ATR0598G093 Amborella trichopoda HOM05D007350 ORTHO05D009323 2.4e-15 86.3 96 51.0
Thhalv10026464m.g Eutrema salsugineum HOM05D007350 ORTHO05D009323 2.4e-15 86.3 158 37.3
BcaC01g00233 Brassica carinata HOM05D007350 ORTHO05D009323 4.1e-15 85.5 96 51.0
HanXRQChr10g0298081 Helianthus annuus HOM05D007350 ORTHO05D009323 4.1e-15 85.5 104 51.0
THA.LOC104807801 Tarenaya hassleriana HOM05D007350 ORTHO05D009323 5.4e-15 85.1 76 57.9
ECA234G1892 Erigeron canadensis HOM05D007350 ORTHO05D009323 1.2e-14 84.0 77 59.7
CDE11G0403 Ceratophyllum demersum HOM05D007350 ORTHO05D009323 3.5e-14 82.4 66 65.2
Atru.chr5.3441 Acer truncatum HOM05D007350 ORTHO05D009323 4.6e-14 82.0 128 43.8
A08p24200 Brassica napus HOM05D007350 ORTHO05D009323 4.6e-14 82.0 72 56.9
BcaC01g00225 Brassica carinata HOM05D007350 ORTHO05D009323 7.8e-14 81.3 87 50.6
Dinv09314 Davidia involucrata HOM05D007350 ORTHO05D009323 7.8e-14 81.3 123 36.6
BraA08t34374Z Brassica rapa HOM05D007350 ORTHO05D009323 1.3e-13 80.5 60 68.3
BolC3t19964H Brassica oleracea HOM05D007350 ORTHO05D009323 2.3e-13 79.7 72 55.6
C03p77120 Brassica napus HOM05D007350 ORTHO05D009323 6.6e-13 78.2 72 54.2
Os09g0450200 Oryza sativa ssp. japonica HOM05D007350 ORTHO05D009323 6.6e-13 78.2 78 52.6
MD10G1128000 Malus domestica HOM05D007350 ORTHO05D009323 1.1e-12 77.4 52 78.8
SEGI_00987 Sequoiadendron giganteum HOM05D007350 ORTHO05D009323 1.2e-09 67.4 152 36.2
Atru.chr6.83 Acer truncatum HOM05D007350 ORTHO05D009323 2.6e-09 66.2 90 47.8
CSS0005535 Camellia sinensis var. sinensis HOM05D007350 ORTHO05D009323 2.9e-08 62.8 109 37.6
SalBow5G3345 Salvia bowleyana HOM05D007350 ORTHO05D009323 1.6e-06 57.0 59 47.5
RcHm_v2.0_Chr6g0278961 Rosa chinensis HOM05D007350 ORTHO05D009323 2.1e-06 56.6 78 38.5
Pp3c6_16710 Physcomitrium patens HOM05D007350 ORTHO05D009323 3.5e-06 55.8 76 43.4
HPP92_012658 Vanilla planifolia HOM05D007350 ORTHO05D009323 3.5e-06 55.8 86 44.2


User provided reference genes

Program Settings