Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002586g0080 Nicotiana tabacum HOM05D006196 ORTHO05D007758 6.5e-193 677.2 330 100.0
Nitab4.5_0003590g0020 Nicotiana tabacum HOM05D006196 ORTHO05D007758 1.2e-186 656.4 330 97.0
Solyc11g006830.2 Solanum lycopersicum HOM05D006196 ORTHO05D007758 2.1e-167 592.4 330 87.6
Sopen11g002750 Solanum pennellii HOM05D006196 ORTHO05D007758 2.1e-167 592.4 330 87.6
PGSC0003DMG400023969 Solanum tuberosum HOM05D006196 ORTHO05D007758 6.8e-166 587.4 331 86.4
CAN.G645.29 Capsicum annuum HOM05D006196 ORTHO05D007758 1.3e-161 573.2 330 85.5
Peaxi162Scf00173g00018 Petunia axillaris HOM05D006196 ORTHO05D007758 3.0e-137 492.3 279 85.3
Oeu026604.1 Olea europaea HOM05D006196 ORTHO05D007758 4.9e-132 474.9 326 69.9
CSS0023098 Camellia sinensis var. sinensis HOM05D006196 ORTHO05D007758 3.0e-129 465.7 330 68.2
Actinidia18628 Actinidia chinensis HOM05D006196 ORTHO05D007758 3.6e-127 458.8 326 68.7
MSTRG.9056 Avicennia marina HOM05D006196 ORTHO05D007758 1.7e-121 439.9 329 63.8
Lj2C33T17 Lonicera japonica HOM05D006196 ORTHO05D007758 6.6e-121 438.0 336 66.1
Cc02_g09600 Coffea canephora HOM05D006196 ORTHO05D007758 7.3e-120 434.5 329 64.7
Migut.F00871 Erythranthe guttata HOM05D006196 ORTHO05D007758 9.6e-120 434.1 328 63.1
Rhsim03G0097800 Rhododendron simsii HOM05D006196 ORTHO05D007758 3.6e-119 432.2 338 65.1
MSTRG.27569 Avicennia marina HOM05D006196 ORTHO05D007758 8.1e-119 431.0 333 60.7
SalBow6G5730 Salvia bowleyana HOM05D006196 ORTHO05D007758 1.1e-118 430.6 328 62.2
SGA_v2.0_scaffold13G06435 Striga asiatica HOM05D006196 ORTHO05D007758 6.4e-116 421.4 374 56.7
TAR623G1022 Trochodendron aralioides HOM05D006196 ORTHO05D007758 1.4e-115 420.2 332 62.7
Manes.10G062200 Manihot esculenta HOM05D006196 ORTHO05D007758 1.3e-111 407.1 326 62.6
Manes.07G086900 Manihot esculenta HOM05D006196 ORTHO05D007758 1.6e-111 406.8 328 62.5
unitig_37.g12349 Utricularia gibba HOM05D006196 ORTHO05D007758 8.1e-111 404.4 328 59.5
Hma1.2p1_0457F.1_g156990 Hydrangea macrophylla HOM05D006196 ORTHO05D007758 5.3e-110 401.7 305 65.2
Haze_03294 Corylus avellana HOM05D006196 ORTHO05D007758 8.4e-108 394.4 331 60.1
QL04p046737 Quercus lobata HOM05D006196 ORTHO05D007758 1.2e-106 390.6 352 57.4
Atru.chr12.1044 Acer truncatum HOM05D006196 ORTHO05D007758 6.0e-106 388.3 324 60.5
MBI01_g16486_MAGBIO Magnolia biondii HOM05D006196 ORTHO05D007758 7.9e-106 387.9 333 57.7
ECA238G1493 Erigeron canadensis HOM05D006196 ORTHO05D007758 1.8e-105 386.7 315 59.7
Lsat_1_v5_gn_2_104380 Lactuca sativa HOM05D006196 ORTHO05D007758 3.0e-105 386.0 307 61.9
Potri.010G239700 Populus trichocarpa HOM05D006196 ORTHO05D007758 8.7e-105 384.4 326 58.0
HanXRQChr11g0342081 Helianthus annuus HOM05D006196 ORTHO05D007758 1.5e-104 383.6 305 61.3
HanXRQChr07g0194291 Helianthus annuus HOM05D006196 ORTHO05D007758 1.9e-104 383.3 307 60.3
Lj5g0013601 Lotus japonicus HOM05D006196 ORTHO05D007758 1.9e-104 383.3 328 58.8
Medtr1g111960 Medicago truncatula HOM05D006196 ORTHO05D007758 2.1e-103 379.8 335 58.5
Sabra10G0187700 Salix brachista HOM05D006196 ORTHO05D007758 2.8e-103 379.4 326 58.3
CiPaw.13G040700 Carya illinoinensis HOM05D006196 ORTHO05D007758 6.9e-102 374.8 334 58.4
Thecc.10G115000 Theobroma cacao HOM05D006196 ORTHO05D007758 2.6e-101 372.9 336 56.0
Duzib114G0383 Durio zibethinus HOM05D006196 ORTHO05D007758 1.0e-100 370.9 335 55.2
Glyma.20G111300 Glycine max HOM05D006196 ORTHO05D007758 1.0e-100 370.9 334 56.0
COL.COLO4_29746 Corchorus olitorius HOM05D006196 ORTHO05D007758 1.7e-100 370.2 337 55.5
Cpa.g.sc56.1 Carica papaya HOM05D006196 ORTHO05D007758 8.4e-100 367.9 337 55.8
Glyma.10G278400 Glycine max HOM05D006196 ORTHO05D007758 1.9e-99 366.7 333 55.6
Potri.008G019700 Populus trichocarpa HOM05D006196 ORTHO05D007758 1.9e-99 366.7 323 57.3
MELO3C019897.2 Cucumis melo HOM05D006196 ORTHO05D007758 4.2e-99 365.5 343 57.1
CsaV3_6G004260 Cucumis sativus L. HOM05D006196 ORTHO05D007758 9.3e-99 364.4 343 57.1
ClCG08G008290 Citrullus lanatus HOM05D006196 ORTHO05D007758 4.6e-98 362.1 338 58.3
DCAR_019003 Daucus carota HOM05D006196 ORTHO05D007758 4.6e-98 362.1 337 55.5
Sabra08G0013000 Salix brachista HOM05D006196 ORTHO05D007758 4.6e-98 362.1 323 57.0
CANSAT56G0980 Cannabis sativa HOM05D006196 ORTHO05D007758 6.0e-98 361.7 350 56.6
Lalb_Chr06g0166391 Lupinus albus HOM05D006196 ORTHO05D007758 6.0e-98 361.7 335 53.7
Sed0008038 Sechium edule HOM05D006196 ORTHO05D007758 3.0e-97 359.4 335 57.9
VMungo0720G0291 Vigna mungo HOM05D006196 ORTHO05D007758 8.7e-97 357.8 331 54.7
Psat0s1903g0040 Pisum sativum HOM05D006196 ORTHO05D007758 1.1e-96 357.5 336 54.8
CARHR164220 Cardamine hirsuta HOM05D006196 ORTHO05D007758 2.5e-96 356.3 354 51.7
AT3G54290 Arabidopsis thaliana HOM05D006196 ORTHO05D007758 9.6e-96 354.4 349 53.3
Sp5g08100 Schrenkiella parvula HOM05D006196 ORTHO05D007758 9.6e-96 354.4 352 53.1
Phvul.007G023000 Phaseolus vulgaris HOM05D006196 ORTHO05D007758 1.6e-95 353.6 331 54.7
arahy.Tifrunner.gnm1.ann1.N25XM0 Arachis hypogaea HOM05D006196 ORTHO05D007758 2.8e-95 352.8 333 53.5
Ca_25660_v3 Cicer arietinum L. HOM05D006196 ORTHO05D007758 2.8e-95 352.8 335 54.3
AL5G35330 Arabidopsis lyrata HOM05D006196 ORTHO05D007758 4.8e-95 352.1 352 53.4
GSVIVG01010724001 Vitis vinifera HOM05D006196 ORTHO05D007758 4.8e-95 352.1 263 65.0
arahy.Tifrunner.gnm1.ann1.EL78PJ Arachis hypogaea HOM05D006196 ORTHO05D007758 8.2e-95 351.3 333 53.5
Carub.0005s2088 Capsella rubella HOM05D006196 ORTHO05D007758 3.1e-94 349.4 356 52.8
PSO339G1429 Papaver somniferum HOM05D006196 ORTHO05D007758 4.0e-94 349.0 339 53.4
PSO801G0620 Papaver somniferum HOM05D006196 ORTHO05D007758 6.9e-94 348.2 336 53.9
Thhalv10010495m.g Eutrema salsugineum HOM05D006196 ORTHO05D007758 1.5e-93 347.1 356 51.7
Sed0021157 Sechium edule HOM05D006196 ORTHO05D007758 1.5e-93 347.1 315 58.4
Gorai.012G020000 Gossypium raimondii HOM05D006196 ORTHO05D007758 3.4e-93 345.9 330 53.0
THA.LOC104811342 Tarenaya hassleriana HOM05D006196 ORTHO05D007758 3.4e-93 345.9 360 50.8
Gohir.D04G017300 Gossypium hirsutum HOM05D006196 ORTHO05D007758 1.7e-92 343.6 330 53.0
Aa31sc392G30 Aethionema arabicum HOM05D006196 ORTHO05D007758 3.8e-92 342.4 344 50.3
Gohir.A05G398600 Gossypium hirsutum HOM05D006196 ORTHO05D007758 5.0e-92 342.0 330 52.4
BcaC02g09075 Brassica carinata HOM05D006196 ORTHO05D007758 1.1e-91 340.9 323 53.6
Medtr1g050385 Medicago truncatula HOM05D006196 ORTHO05D007758 2.5e-91 339.7 348 51.1
BraA04t16248Z Brassica rapa HOM05D006196 ORTHO05D007758 3.2e-91 339.3 324 55.2
TPR.G2427 Trifolium pratense HOM05D006196 ORTHO05D007758 4.2e-91 339.0 336 53.9
A04p05460 Brassica napus HOM05D006196 ORTHO05D007758 5.5e-91 338.6 324 54.6
Dinv10931 Davidia involucrata HOM05D006196 ORTHO05D007758 5.5e-91 338.6 258 66.7
TPR.G10627 Trifolium pratense HOM05D006196 ORTHO05D007758 1.6e-90 337.0 350 52.6
BcaB02g08483 Brassica carinata HOM05D006196 ORTHO05D007758 3.5e-90 335.9 332 53.0
Sc09g0005310 Simmondsia chinensis HOM05D006196 ORTHO05D007758 6.1e-90 335.1 315 54.0
Hund06787 Selenicereus undatus HOM05D006196 ORTHO05D007758 7.9e-90 334.7 330 53.6
BolC8t50558H Brassica oleracea HOM05D006196 ORTHO05D007758 2.3e-89 333.2 368 48.9
A09p47290 Brassica napus HOM05D006196 ORTHO05D007758 3.9e-89 332.4 370 48.9
BraA09t40190Z Brassica rapa HOM05D006196 ORTHO05D007758 5.1e-89 332.0 370 48.6
C08p29520 Brassica napus HOM05D006196 ORTHO05D007758 6.7e-89 331.6 368 48.6
TWI38G1704 Tripterygium wilfordii HOM05D006196 ORTHO05D007758 2.2e-87 326.6 337 53.1
Ah.13g074540 Amaranthus hybridus HOM05D006196 ORTHO05D007758 3.7e-87 325.9 314 53.2
CDE08G0664 Ceratophyllum demersum HOM05D006196 ORTHO05D007758 1.4e-86 323.9 316 51.6
C04p38140 Brassica napus HOM05D006196 ORTHO05D007758 1.2e-85 320.9 331 51.7
Glyma.10G111100 Glycine max HOM05D006196 ORTHO05D007758 3.8e-84 315.8 344 50.9
Ah.06g186650 Amaranthus hybridus HOM05D006196 ORTHO05D007758 5.0e-84 315.5 341 50.1
Lj6g0028083 Lotus japonicus HOM05D006196 ORTHO05D007758 6.5e-84 315.1 344 49.1
Prupe.2G067800 Prunus persica HOM05D006196 ORTHO05D007758 1.4e-83 313.9 354 50.8
Lalb_Chr01g0010431 Lupinus albus HOM05D006196 ORTHO05D007758 2.1e-82 310.1 378 45.8
Psat6g093840 Pisum sativum HOM05D006196 ORTHO05D007758 3.0e-81 306.2 340 48.5
MD07G1059000 Malus domestica HOM05D006196 ORTHO05D007758 1.1e-80 304.3 355 48.2
MD07G1059300 Malus domestica HOM05D006196 ORTHO05D007758 3.7e-79 299.3 361 46.8
Ciclev10015947m.g Citrus clementina HOM05D006196 ORTHO05D007758 5.1e-73 278.9 343 47.8
ATR0820G221 Amborella trichopoda HOM05D006196 ORTHO05D007758 3.5e-69 266.2 240 55.0
BcaB01g00209 Brassica carinata HOM05D006196 ORTHO05D007758 1.8e-65 253.8 368 41.3
BolC4t25389H Brassica oleracea HOM05D006196 ORTHO05D007758 9.4e-59 231.5 208 56.7
unitig_46.g18638 Utricularia gibba HOM05D006196 ORTHO05D007758 2.2e-55 220.3 178 62.4
Os01g0861700 Oryza sativa ssp. japonica HOM05D006196 ORTHO05D007758 1.4e-49 201.1 320 39.1
HPP92_026086 Vanilla planifolia HOM05D006196 ORTHO05D007758 3.0e-49 199.9 348 37.1
HPP92_025137 Vanilla planifolia HOM05D006196 ORTHO05D007758 2.6e-48 196.8 348 36.8
Zm00001eb147080 Zea mays HOM05D006196 ORTHO05D007758 3.4e-48 196.4 318 38.4
SMO146G0289 Selaginella moellendorffii HOM05D006196 ORTHO05D007758 1.4e-46 191.0 249 38.2
Mapoly0016s0155 Marchantia polymorpha HOM05D006196 ORTHO05D007758 3.3e-43 179.9 217 41.0
Pp3c13_16840 Physcomitrium patens HOM05D006196 ORTHO05D007758 6.3e-39 165.6 222 41.0
Ca_20266_v3 Cicer arietinum L. HOM05D006196 ORTHO05D007758 1.1e-38 164.9 210 43.8
AagrBONN_evm.TU.Sc2ySwM_228.4853 Anthoceros agrestis HOM05D006196 ORTHO05D007758 5.4e-38 162.5 221 39.4
Pp3c12_15440 Physcomitrium patens HOM05D006196 ORTHO05D007758 3.9e-36 156.4 203 39.9
Pp3c16_23080 Physcomitrium patens HOM05D006196 ORTHO05D007758 3.9e-36 156.4 216 38.4
SMO198G0051 Selaginella moellendorffii HOM05D006196 ORTHO05D007758 8.6e-36 155.2 227 39.6
Pp3c25_11830 Physcomitrium patens HOM05D006196 ORTHO05D007758 1.1e-35 154.8 216 38.0
Pp3c3_21020 Physcomitrium patens HOM05D006196 ORTHO05D007758 8.0e-34 148.7 218 40.4
Pp3c16_23090 Physcomitrium patens HOM05D006196 ORTHO05D007758 8.9e-33 145.2 210 37.1
Pp3c6_4750 Physcomitrium patens HOM05D006196 ORTHO05D007758 1.2e-32 144.8 221 33.5
Pp3c25_11860 Physcomitrium patens HOM05D006196 ORTHO05D007758 2.4e-30 137.1 362 28.5
arahy.Tifrunner.gnm1.ann1.5GK804 Arachis hypogaea HOM05D006196 ORTHO05D007758 6.6e-28 129.0 120 52.5
Actinidia02755 Actinidia chinensis HOM05D006196 ORTHO05D007758 5.6e-27 125.9 85 70.6
unitig_46.g18639 Utricularia gibba HOM05D006196 ORTHO05D007758 6.8e-25 119.0 103 51.5
arahy.Tifrunner.gnm1.ann1.K1D1LI Arachis hypogaea HOM05D006196 ORTHO05D007758 1.2e-24 118.2 117 51.3
CBR_g31351 Chara braunii HOM05D006196 ORTHO05D007758 5.8e-24 115.9 163 35.6
Zm00001eb366830 Zea mays HOM05D006196 ORTHO05D007758 2.4e-22 110.5 131 45.0


User provided reference genes

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