Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002586g0010 Nicotiana tabacum HOM05D006601 ORTHO05D008281 6.5e-80 301.2 161 100.0
Nitab4.5_0009484g0010 Nicotiana tabacum HOM05D006601 ORTHO05D008281 4.1e-66 255.4 153 91.5
Sopen11g002690 Solanum pennellii HOM05D006601 ORTHO05D008281 4.5e-65 251.9 153 90.8
CAN.G1417.5 Capsicum annuum HOM05D006601 ORTHO05D008281 7.7e-65 251.1 141 92.2
Solyc11g006760.3 Solanum lycopersicum HOM05D006601 ORTHO05D008281 1.7e-64 250.0 153 90.2
PGSC0003DMG400023966 Solanum tuberosum HOM05D006601 ORTHO05D008281 8.5e-64 247.7 153 86.9
Peaxi162Scf00125g00234 Petunia axillaris HOM05D006601 ORTHO05D008281 5.3e-58 228.4 153 84.3
Phvul.002G091600 Phaseolus vulgaris HOM05D006601 ORTHO05D008281 1.3e-43 180.6 155 67.1
Rhsim09G0141800 Rhododendron simsii HOM05D006601 ORTHO05D008281 1.3e-43 180.6 155 68.4
Lalb_Chr10g0098441 Lupinus albus HOM05D006601 ORTHO05D008281 3.1e-42 176.0 136 70.6
Medtr5g042160 Medicago truncatula HOM05D006601 ORTHO05D008281 7.0e-42 174.9 140 67.9
HanXRQChr11g0321661 Helianthus annuus HOM05D006601 ORTHO05D008281 1.2e-41 174.1 153 67.3
Ca_04833_v3 Cicer arietinum L. HOM05D006601 ORTHO05D008281 4.5e-41 172.2 133 69.2
Thecc.10G114200 Theobroma cacao HOM05D006601 ORTHO05D008281 5.9e-41 171.8 149 65.8
Lj2g0012177 Lotus japonicus HOM05D006601 ORTHO05D008281 1.7e-40 170.2 140 68.6
Glyma.02G110700 Glycine max HOM05D006601 ORTHO05D008281 2.3e-40 169.9 133 68.4
vmacro10311 Vaccinium macrocarpon HOM05D006601 ORTHO05D008281 2.9e-40 169.5 132 72.0
CSS0000414 Camellia sinensis var. sinensis HOM05D006601 ORTHO05D008281 5.0e-40 168.7 137 70.8
Lsat_1_v5_gn_0_8161 Lactuca sativa HOM05D006601 ORTHO05D008281 6.6e-40 168.3 136 70.6
Oeu030223.2 Olea europaea HOM05D006601 ORTHO05D008281 6.6e-40 168.3 159 61.6
Psat2g116120 Pisum sativum HOM05D006601 ORTHO05D008281 8.6e-40 167.9 133 68.4
Duzib114G0052 Durio zibethinus HOM05D006601 ORTHO05D008281 1.5e-39 167.2 152 61.8
TWI38G1517 Tripterygium wilfordii HOM05D006601 ORTHO05D008281 1.5e-39 167.2 146 63.0
Cc02_g09570 Coffea canephora HOM05D006601 ORTHO05D008281 1.9e-39 166.8 132 68.9
arahy.Tifrunner.gnm1.ann1.0XG3CD Arachis hypogaea HOM05D006601 ORTHO05D008281 2.5e-39 166.4 151 64.2
Haze_03300 Corylus avellana HOM05D006601 ORTHO05D008281 2.5e-39 166.4 107 77.6
arahy.Tifrunner.gnm1.ann1.VBS9AQ Arachis hypogaea HOM05D006601 ORTHO05D008281 3.3e-39 166.0 135 67.4
Prupe.5G030400 Prunus persica HOM05D006601 ORTHO05D008281 3.3e-39 166.0 152 65.1
GSVIVG01010682001 Vitis vinifera HOM05D006601 ORTHO05D008281 4.3e-39 165.6 145 66.2
Glyma.01G052400 Glycine max HOM05D006601 ORTHO05D008281 7.3e-39 164.9 136 69.1
Cfa010329 Carpinus fangiana HOM05D006601 ORTHO05D008281 9.5e-39 164.5 101 81.2
Oeu026608.1 Olea europaea HOM05D006601 ORTHO05D008281 1.2e-38 164.1 132 68.9
Gohir.A05G287400 Gossypium hirsutum HOM05D006601 ORTHO05D008281 1.6e-38 163.7 142 62.0
Lj3A925T73 Lonicera japonica HOM05D006601 ORTHO05D008281 1.6e-38 163.7 128 69.5
TWI63G1188 Tripterygium wilfordii HOM05D006601 ORTHO05D008281 1.6e-38 163.7 99 80.8
CiPaw.13G041000 Carya illinoinensis HOM05D006601 ORTHO05D008281 2.8e-38 162.9 101 79.2
ECA232G0968 Erigeron canadensis HOM05D006601 ORTHO05D008281 2.8e-38 162.9 102 83.3
Sc09g0005300 Simmondsia chinensis HOM05D006601 ORTHO05D008281 3.6e-38 162.5 141 64.5
PSO339G2358 Papaver somniferum HOM05D006601 ORTHO05D008281 4.7e-38 162.2 156 62.8
TAR633G2162 Trochodendron aralioides HOM05D006601 ORTHO05D008281 4.7e-38 162.2 143 65.7
Gohir.D05G288500 Gossypium hirsutum HOM05D006601 ORTHO05D008281 6.1e-38 161.8 142 61.3
MD06G1038200 Malus domestica HOM05D006601 ORTHO05D008281 6.1e-38 161.8 140 65.7
Potri.008G019100 Populus trichocarpa HOM05D006601 ORTHO05D008281 6.1e-38 161.8 143 62.9
Gorai.009G303600 Gossypium raimondii HOM05D006601 ORTHO05D008281 1.0e-37 161.0 147 61.2
MBI17_g13115_MAGBIO Magnolia biondii HOM05D006601 ORTHO05D008281 1.4e-37 160.6 143 66.4
DCAR_006335 Daucus carota HOM05D006601 ORTHO05D008281 1.8e-37 160.2 150 62.0
PGR044G2546 Punica granatum HOM05D006601 ORTHO05D008281 3.0e-37 159.5 142 64.1
QL04p046797 Quercus lobata HOM05D006601 ORTHO05D008281 5.2e-37 158.7 136 67.6
QL04p047245 Quercus lobata HOM05D006601 ORTHO05D008281 5.2e-37 158.7 136 67.6
Dinv12840 Davidia involucrata HOM05D006601 ORTHO05D008281 6.8e-37 158.3 140 65.7
SalBow3G0796 Salvia bowleyana HOM05D006601 ORTHO05D008281 6.8e-37 158.3 153 62.1
Sabra10G0188100 Salix brachista HOM05D006601 ORTHO05D008281 8.9e-37 157.9 158 56.3
Atru.chr12.1047 Acer truncatum HOM05D006601 ORTHO05D008281 1.5e-36 157.1 142 62.7
Eucgr.J00269 Eucalyptus grandis HOM05D006601 ORTHO05D008281 1.5e-36 157.1 120 70.0
Potri.010G240300 Populus trichocarpa HOM05D006601 ORTHO05D008281 4.4e-36 155.6 137 62.0
MSTRG.9054 Avicennia marina HOM05D006601 ORTHO05D008281 9.8e-36 154.5 151 62.3
FAN24G1745 Fragaria x ananassa HOM05D006601 ORTHO05D008281 1.7e-35 153.7 138 66.7
COL.COLO4_03655 Corchorus olitorius HOM05D006601 ORTHO05D008281 2.9e-35 152.9 152 56.6
Manes.10G062700 Manihot esculenta HOM05D006601 ORTHO05D008281 2.9e-35 152.9 154 61.7
RcHm_v2.0_Chr6g0269151 Rosa chinensis HOM05D006601 ORTHO05D008281 3.7e-35 152.5 101 75.2
FvH4_2g10940 Fragaria vesca HOM05D006601 ORTHO05D008281 4.9e-35 152.1 138 65.9
Hund22273 Selenicereus undatus HOM05D006601 ORTHO05D008281 4.9e-35 152.1 116 68.1
TPR.G31604 Trifolium pratense HOM05D006601 ORTHO05D008281 6.4e-35 151.8 91 85.7
Aqoxy2G01120 Aquilegia oxysepala HOM05D006601 ORTHO05D008281 1.4e-34 150.6 145 60.7
SGA_v2.0_scaffold62G21313 Striga asiatica HOM05D006601 ORTHO05D008281 1.8e-34 150.2 136 64.7
AL5G32810 Arabidopsis lyrata HOM05D006601 ORTHO05D008281 2.4e-34 149.8 151 56.3
unitig_899.g14469 Utricularia gibba HOM05D006601 ORTHO05D008281 7.0e-34 148.3 155 60.6
RcHm_v2.0_Chr2g0160691 Rosa chinensis HOM05D006601 ORTHO05D008281 9.2e-34 147.9 101 74.3
Carub.0005s1858 Capsella rubella HOM05D006601 ORTHO05D008281 1.2e-33 147.5 145 55.2
THA.LOC104823558 Tarenaya hassleriana HOM05D006601 ORTHO05D008281 2.0e-33 146.7 142 59.2
AT3G52220 Arabidopsis thaliana HOM05D006601 ORTHO05D008281 2.7e-33 146.4 144 57.6
Migut.F00866 Erythranthe guttata HOM05D006601 ORTHO05D008281 5.9e-33 145.2 143 61.5
MELO3C019900.2 Cucumis melo HOM05D006601 ORTHO05D008281 1.7e-32 143.7 101 75.2
ClCG08G008320 Citrullus lanatus HOM05D006601 ORTHO05D008281 2.3e-32 143.3 101 75.2
Nn6g34864 Nelumbo nucifera HOM05D006601 ORTHO05D008281 2.3e-32 143.3 89 83.1
CARHR161980 Cardamine hirsuta HOM05D006601 ORTHO05D008281 3.0e-32 142.9 151 53.6
Sp5g10040 Schrenkiella parvula HOM05D006601 ORTHO05D008281 8.6e-32 141.4 151 53.6
HPP92_000012 Vanilla planifolia HOM05D006601 ORTHO05D008281 8.6e-32 141.4 101 73.3
Thhalv10010678m.g Eutrema salsugineum HOM05D006601 ORTHO05D008281 1.5e-31 140.6 151 56.3
Ciclev10016593m.g Citrus clementina HOM05D006601 ORTHO05D008281 3.3e-31 139.4 114 65.8
PSO692G0001 Papaver somniferum HOM05D006601 ORTHO05D008281 4.3e-31 139.0 138 64.5
PSO801G0555 Papaver somniferum HOM05D006601 ORTHO05D008281 4.3e-31 139.0 138 64.5
A09p45280 Brassica napus HOM05D006601 ORTHO05D008281 7.3e-31 138.3 159 50.9
C08p27460 Brassica napus HOM05D006601 ORTHO05D008281 7.3e-31 138.3 150 54.7
BolC8t50363H Brassica oleracea HOM05D006601 ORTHO05D008281 7.3e-31 138.3 150 54.7
BraA09t39991Z Brassica rapa HOM05D006601 ORTHO05D008281 7.3e-31 138.3 159 50.9
Os08g0558700 Oryza sativa ssp. japonica HOM05D006601 ORTHO05D008281 9.5e-31 137.9 118 63.6
BcaC07g39592 Brassica carinata HOM05D006601 ORTHO05D008281 2.1e-30 136.7 149 54.4
Sed0022988 Sechium edule HOM05D006601 ORTHO05D008281 3.6e-30 136.0 102 74.5
ATR0776G086 Amborella trichopoda HOM05D006601 ORTHO05D008281 6.2e-30 135.2 148 54.7
AUR62041519 Chenopodium quinoa HOM05D006601 ORTHO05D008281 6.2e-30 135.2 93 74.2
CsaV3_6G004290 Cucumis sativus L. HOM05D006601 ORTHO05D008281 8.0e-30 134.8 148 59.5
FAN15G0841 Fragaria x ananassa HOM05D006601 ORTHO05D008281 1.8e-29 133.7 144 59.0
FAN20G1775 Fragaria x ananassa HOM05D006601 ORTHO05D008281 3.1e-29 132.9 87 79.3
AUR62042084 Chenopodium quinoa HOM05D006601 ORTHO05D008281 3.4e-28 129.4 144 52.8
Aa31LG10G7330 Aethionema arabicum HOM05D006601 ORTHO05D008281 9.8e-28 127.9 191 44.5
SEGI_26123 Sequoiadendron giganteum HOM05D006601 ORTHO05D008281 4.3e-23 112.5 159 43.4
CiPaw.14G033700 Carya illinoinensis HOM05D006601 ORTHO05D008281 5.8e-20 102.1 65 81.5
Aqoxy2G01116 Aquilegia oxysepala HOM05D006601 ORTHO05D008281 9.8e-20 101.3 75 72.0
Ah.06g186680 Amaranthus hybridus HOM05D006601 ORTHO05D008281 1.7e-19 100.5 112 55.4
Zm00001eb039400 Zea mays HOM05D006601 ORTHO05D008281 2.7e-17 93.2 105 54.3
SMO367G0990 Selaginella moellendorffii HOM05D006601 ORTHO05D008281 2.5e-15 86.7 89 57.3
Lsat_1_v5_gn_4_8660 Lactuca sativa HOM05D006601 ORTHO05D008281 4.3e-15 85.9 55 74.5
Mapoly0044s0087 Marchantia polymorpha HOM05D006601 ORTHO05D008281 4.3e-15 85.9 146 40.4
CDE04G0959 Ceratophyllum demersum HOM05D006601 ORTHO05D008281 7.3e-15 85.1 147 39.5
Actinidia31106 Actinidia chinensis HOM05D006601 ORTHO05D008281 1.2e-14 84.3 48 91.7
Pp3c1_22490 Physcomitrium patens HOM05D006601 ORTHO05D008281 3.6e-14 82.8 149 38.9
Hma1.2p1_1491F.1_g286720 Hydrangea macrophylla HOM05D006601 ORTHO05D008281 5.4e-10 68.9 37 89.2
AagrBONN_evm.TU.Sc2ySwM_228.2727 Anthoceros agrestis HOM05D006601 ORTHO05D008281 2.7e-09 66.6 59 55.9
MCO05G050 Micromonas commoda HOM05D006601 ORTHO05D008281 3.5e-09 66.2 93 48.4
BcaC02g09271 Brassica carinata HOM05D006601 ORTHO05D008281 3.0e-08 63.2 126 40.5
Cre18.g749347 Chlamydomonas reinhardtii HOM05D006601 ORTHO05D008281 1.9e-07 60.5 107 39.3


User provided reference genes

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