Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002585g0010 Nicotiana tabacum HOM05D005543 ORTHO05D006584 5.0e-105 384.4 189 100.0
Nitab4.5_0004541g0020 Nicotiana tabacum HOM05D005543 ORTHO05D006584 1.0e-97 360.1 189 94.2
Peaxi162Scf00160g01739 Petunia axillaris HOM05D005543 ORTHO05D006584 1.8e-83 312.8 196 79.6
PGSC0003DMG400016956 Solanum tuberosum HOM05D005543 ORTHO05D006584 4.5e-82 308.1 197 78.7
Peaxi162Scf00226g00217 Petunia axillaris HOM05D005543 ORTHO05D006584 2.3e-81 305.8 189 75.1
Solyc12g056760.2 Solanum lycopersicum HOM05D005543 ORTHO05D006584 5.5e-80 301.2 197 76.6
Sopen12g029440 Solanum pennellii HOM05D005543 ORTHO05D006584 9.5e-80 300.4 197 76.1
Nitab4.5_0001000g0150 Nicotiana tabacum HOM05D005543 ORTHO05D006584 4.1e-75 285.0 190 72.6
Nitab4.5_0000433g0010 Nicotiana tabacum HOM05D005543 ORTHO05D006584 2.0e-74 282.7 190 72.6
Sopen04g028290 Solanum pennellii HOM05D005543 ORTHO05D006584 1.3e-73 280.0 190 71.1
Solyc04g072120.2 Solanum lycopersicum HOM05D005543 ORTHO05D006584 2.3e-73 279.3 190 70.5
Cc10_g06390 Coffea canephora HOM05D005543 ORTHO05D006584 3.8e-73 278.5 187 70.1
Dinv41020 Davidia involucrata HOM05D005543 ORTHO05D006584 6.6e-73 277.7 179 71.5
PGSC0003DMG400031139 Solanum tuberosum HOM05D005543 ORTHO05D006584 9.5e-72 273.9 190 69.5
Actinidia17758 Actinidia chinensis HOM05D005543 ORTHO05D006584 2.3e-70 269.2 181 72.4
Hma1.2p1_0276F.1_g110980 Hydrangea macrophylla HOM05D005543 ORTHO05D006584 2.0e-69 266.2 184 68.5
MELO3C019959.2 Cucumis melo HOM05D005543 ORTHO05D006584 2.9e-68 262.3 177 70.1
Duzib116G0276 Durio zibethinus HOM05D005543 ORTHO05D006584 3.7e-68 261.9 179 68.7
THA.LOC104800097 Tarenaya hassleriana HOM05D005543 ORTHO05D006584 8.3e-68 260.8 183 67.2
CSS0010673 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 4.1e-67 258.5 166 71.7
ClCG08G007180 Citrullus lanatus HOM05D005543 ORTHO05D006584 4.1e-67 258.5 177 68.4
Thecc.08G164300 Theobroma cacao HOM05D005543 ORTHO05D006584 5.4e-67 258.1 166 71.1
MSTRG.22116 Avicennia marina HOM05D005543 ORTHO05D006584 7.0e-67 257.7 179 65.9
SGA_v2.0_scaffold166G38393 Striga asiatica HOM05D005543 ORTHO05D006584 7.0e-67 257.7 181 66.9
TWI53G2072 Tripterygium wilfordii HOM05D005543 ORTHO05D006584 7.0e-67 257.7 182 66.5
PGR102G0915 Punica granatum HOM05D005543 ORTHO05D006584 4.6e-66 255.0 165 71.5
Gorai.009G259700 Gossypium raimondii HOM05D005543 ORTHO05D006584 7.8e-66 254.2 168 69.0
Sc20g0003140 Simmondsia chinensis HOM05D005543 ORTHO05D006584 1.0e-65 253.8 183 66.7
COL.COLO4_13722 Corchorus olitorius HOM05D005543 ORTHO05D006584 1.3e-65 253.4 166 71.1
Gohir.D05G248600 Gossypium hirsutum HOM05D005543 ORTHO05D006584 1.7e-65 253.1 168 68.5
TAR625G0687 Trochodendron aralioides HOM05D005543 ORTHO05D006584 3.0e-65 252.3 165 67.3
RcHm_v2.0_Chr6g0273681 Rosa chinensis HOM05D005543 ORTHO05D006584 6.6e-65 251.1 175 66.9
CANSAT25G2335 Cannabis sativa HOM05D005543 ORTHO05D006584 8.6e-65 250.8 175 66.3
ECA232G2646 Erigeron canadensis HOM05D005543 ORTHO05D006584 8.6e-65 250.8 192 65.6
Atru.chr13.1972 Acer truncatum HOM05D005543 ORTHO05D006584 1.5e-64 250.0 181 63.5
MD05G1036200 Malus domestica HOM05D005543 ORTHO05D006584 1.5e-64 250.0 175 66.3
SalBow6G1236 Salvia bowleyana HOM05D005543 ORTHO05D006584 1.9e-64 249.6 184 66.3
Eucgr.F04165 Eucalyptus grandis HOM05D005543 ORTHO05D006584 2.5e-64 249.2 174 67.8
Gohir.A05G247100 Gossypium hirsutum HOM05D005543 ORTHO05D006584 2.5e-64 249.2 180 64.4
HanXRQChr11g0320551 Helianthus annuus HOM05D005543 ORTHO05D006584 2.5e-64 249.2 186 66.1
Lj2g0006240 Lotus japonicus HOM05D005543 ORTHO05D006584 2.5e-64 249.2 183 64.5
Lsat_1_v5_gn_9_42581 Lactuca sativa HOM05D005543 ORTHO05D006584 9.5e-64 247.3 181 65.7
MD10G1038300 Malus domestica HOM05D005543 ORTHO05D006584 9.5e-64 247.3 175 64.0
Potri.002G062300 Populus trichocarpa HOM05D005543 ORTHO05D006584 9.5e-64 247.3 184 65.8
Sed0022332 Sechium edule HOM05D005543 ORTHO05D006584 9.5e-64 247.3 184 64.7
CiPaw.16G007100 Carya illinoinensis HOM05D005543 ORTHO05D006584 1.6e-63 246.5 185 63.8
Glyma.16G160100 Glycine max HOM05D005543 ORTHO05D006584 3.6e-63 245.4 178 66.3
Phvul.004G088200 Phaseolus vulgaris HOM05D005543 ORTHO05D006584 4.7e-63 245.0 184 60.9
Prupe.8G044500 Prunus persica HOM05D005543 ORTHO05D006584 4.7e-63 245.0 175 64.0
FAN15G0123 Fragaria x ananassa HOM05D005543 ORTHO05D006584 6.2e-63 244.6 165 67.3
arahy.Tifrunner.gnm1.ann1.FFL75L Arachis hypogaea HOM05D005543 ORTHO05D006584 8.0e-63 244.2 182 63.2
Thhalv10019179m.g Eutrema salsugineum HOM05D005543 ORTHO05D006584 1.1e-62 243.8 173 63.6
Lj7A386T90 Lonicera japonica HOM05D005543 ORTHO05D006584 1.1e-62 243.8 176 65.9
arahy.Tifrunner.gnm1.ann1.XA0Q13 Arachis hypogaea HOM05D005543 ORTHO05D006584 1.4e-62 243.4 182 63.2
unitig_578.g16221 Utricularia gibba HOM05D005543 ORTHO05D006584 1.4e-62 243.4 157 73.2
Manes.02G185600 Manihot esculenta HOM05D005543 ORTHO05D006584 1.8e-62 243.0 181 61.9
Psat0s2687g0120 Pisum sativum HOM05D005543 ORTHO05D006584 1.8e-62 243.0 187 62.6
FvH4_2g12791 Fragaria vesca HOM05D005543 ORTHO05D006584 2.3e-62 242.7 165 67.3
Sp5g26800 Schrenkiella parvula HOM05D005543 ORTHO05D006584 6.8e-62 241.1 175 62.3
SpUn0095_0030 Schrenkiella parvula HOM05D005543 ORTHO05D006584 6.8e-62 241.1 175 62.3
Haze_17839 Corylus avellana HOM05D005543 ORTHO05D006584 8.9e-62 240.7 177 62.1
A07p30600 Brassica napus HOM05D005543 ORTHO05D006584 1.2e-61 240.4 176 63.1
Haze_17833 Corylus avellana HOM05D005543 ORTHO05D006584 1.2e-61 240.4 183 61.7
Aa31LG4G8860 Aethionema arabicum HOM05D005543 ORTHO05D006584 2.6e-61 239.2 175 62.3
C06p45840 Brassica napus HOM05D005543 ORTHO05D006584 2.6e-61 239.2 173 63.6
BraA07t31358Z Brassica rapa HOM05D005543 ORTHO05D006584 2.6e-61 239.2 173 63.6
Migut.N02941 Erythranthe guttata HOM05D005543 ORTHO05D006584 2.6e-61 239.2 177 63.3
BraA07t30695Z Brassica rapa HOM05D005543 ORTHO05D006584 4.4e-61 238.4 176 62.5
Ciclev10002600m.g Citrus clementina HOM05D005543 ORTHO05D006584 4.4e-61 238.4 180 63.9
BolC6t39636H Brassica oleracea HOM05D005543 ORTHO05D006584 7.5e-61 237.7 173 63.0
Nn5g28876 Nelumbo nucifera HOM05D005543 ORTHO05D006584 7.5e-61 237.7 175 60.0
Ah.05g168360 Amaranthus hybridus HOM05D005543 ORTHO05D006584 9.8e-61 237.3 176 62.5
BcaC08g46604 Brassica carinata HOM05D005543 ORTHO05D006584 1.3e-60 236.9 173 62.4
Sabra02G0050300 Salix brachista HOM05D005543 ORTHO05D006584 1.3e-60 236.9 166 65.7
VMungo0464G0571 Vigna mungo HOM05D005543 ORTHO05D006584 1.3e-60 236.9 186 59.7
Hund17502 Selenicereus undatus HOM05D005543 ORTHO05D006584 1.7e-60 236.5 174 66.7
AT1G71780 Arabidopsis thaliana HOM05D005543 ORTHO05D006584 2.9e-60 235.7 175 61.1
FAN24G1753 Fragaria x ananassa HOM05D005543 ORTHO05D006584 2.9e-60 235.7 165 66.1
Medtr6g034680 Medicago truncatula HOM05D005543 ORTHO05D006584 4.9e-60 235.0 184 58.7
AUR62034923 Chenopodium quinoa HOM05D005543 ORTHO05D006584 6.4e-60 234.6 186 58.1
HPP92_007671 Vanilla planifolia HOM05D005543 ORTHO05D006584 8.3e-60 234.2 187 63.1
AL2G31350 Arabidopsis lyrata HOM05D005543 ORTHO05D006584 1.1e-59 233.8 175 61.1
vmacro21199 Vaccinium macrocarpon HOM05D005543 ORTHO05D006584 1.1e-59 233.8 199 58.3
Ca_04656_v3 Cicer arietinum L. HOM05D005543 ORTHO05D006584 1.4e-59 233.4 184 58.7
EL10Ac1g01633 Beta vulgaris HOM05D005543 ORTHO05D006584 1.9e-59 233.0 196 57.7
A07p37930 Brassica napus HOM05D005543 ORTHO05D006584 1.9e-59 233.0 173 61.8
BolC6t38643H Brassica oleracea HOM05D005543 ORTHO05D006584 1.9e-59 233.0 176 61.9
AUR62026611 Chenopodium quinoa HOM05D005543 ORTHO05D006584 1.9e-59 233.0 186 58.6
Lalb_Chr06g0161821 Lupinus albus HOM05D005543 ORTHO05D006584 3.2e-59 232.3 156 67.9
BcaC08g45757 Brassica carinata HOM05D005543 ORTHO05D006584 4.1e-59 231.9 176 61.4
C06p35380 Brassica napus HOM05D005543 ORTHO05D006584 4.1e-59 231.9 176 61.4
Carub.0002s1854 Capsella rubella HOM05D005543 ORTHO05D006584 4.1e-59 231.9 175 61.1
Sabra05G0151400 Salix brachista HOM05D005543 ORTHO05D006584 1.6e-58 229.9 183 62.3
PSO541G4578 Papaver somniferum HOM05D005543 ORTHO05D006584 3.5e-58 228.8 174 59.8
BcaB03g15617 Brassica carinata HOM05D005543 ORTHO05D006584 4.6e-58 228.4 175 60.0
TAR381G0628 Trochodendron aralioides HOM05D005543 ORTHO05D006584 2.3e-57 226.1 150 66.7
GSVIVG01013678001 Vitis vinifera HOM05D005543 ORTHO05D006584 1.1e-56 223.8 177 62.7
PSO675G1818 Papaver somniferum HOM05D005543 ORTHO05D006584 1.5e-56 223.4 173 57.8
CARHR291000 Cardamine hirsuta HOM05D005543 ORTHO05D006584 7.3e-56 221.1 175 60.0
Nn1g05159 Nelumbo nucifera HOM05D005543 ORTHO05D006584 3.6e-55 218.8 171 57.9
CDE05G2658 Ceratophyllum demersum HOM05D005543 ORTHO05D006584 5.2e-54 214.9 182 53.8
DCAR_019968 Daucus carota HOM05D005543 ORTHO05D006584 1.5e-53 213.4 175 56.6
DCAR_009611 Daucus carota HOM05D005543 ORTHO05D006584 4.4e-53 211.8 178 57.9
Aqoxy6G00453 Aquilegia oxysepala HOM05D005543 ORTHO05D006584 3.7e-52 208.8 145 64.1
Lj4A705G47 Lonicera japonica HOM05D005543 ORTHO05D006584 1.1e-48 197.2 152 63.8
Lj5g0027482 Lotus japonicus HOM05D005543 ORTHO05D006584 3.3e-48 195.7 150 57.3
Psat6g189440 Pisum sativum HOM05D005543 ORTHO05D006584 2.1e-47 193.0 163 53.4
BcaC08g46607 Brassica carinata HOM05D005543 ORTHO05D006584 6.8e-46 188.0 173 52.6
TPR.G17022 Trifolium pratense HOM05D005543 ORTHO05D006584 9.9e-45 184.1 181 47.5
Os01g0715800 Oryza sativa ssp. japonica HOM05D005543 ORTHO05D006584 2.2e-44 183.0 152 56.6
Medtr1g097400 Medicago truncatula HOM05D005543 ORTHO05D006584 1.1e-43 180.6 152 53.9
CsaV3_6G004850 Cucumis sativus L. HOM05D005543 ORTHO05D006584 1.4e-43 180.3 110 72.7
Ca_10645_v3 Cicer arietinum L. HOM05D005543 ORTHO05D006584 1.6e-42 176.8 156 50.0
Cpa.g.sc26.124 Carica papaya HOM05D005543 ORTHO05D006584 4.6e-42 175.3 107 75.7
CSS0045165 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 1.5e-40 170.2 115 70.4
SEGI_03773 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 3.3e-40 169.1 155 49.7
SEGI_04047 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 3.3e-40 169.1 155 49.7
Oeu022062.1 Olea europaea HOM05D005543 ORTHO05D006584 9.6e-40 167.5 109 66.1
SEGI_37275 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 1.1e-38 164.1 147 49.7
FAN27G1145 Fragaria x ananassa HOM05D005543 ORTHO05D006584 1.2e-37 160.6 101 71.3
Rhsim06G0093300 Rhododendron simsii HOM05D005543 ORTHO05D006584 3.4e-37 159.1 108 70.4
QL02p036789 Quercus lobata HOM05D005543 ORTHO05D006584 4.3e-32 142.1 100 65.0
Zm00001eb121890 Zea mays HOM05D005543 ORTHO05D006584 1.7e-28 130.2 161 40.4
SGA_v2.0_scaffold43G16323 Striga asiatica HOM05D005543 ORTHO05D006584 4.0e-22 109.0 72 62.5
Oeu022061.1 Olea europaea HOM05D005543 ORTHO05D006584 3.8e-20 102.4 78 62.8
SEGI_08036 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 6.4e-20 101.7 87 52.9
CSS0016395 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 1.9e-19 100.1 69 69.6
Sopen04g028180 Solanum pennellii HOM05D000002 ORTHO05D000047 2.7e-18 96.3 69 65.2
TPR.G22092 Trifolium pratense HOM05D005543 ORTHO05D006584 3.5e-18 95.9 69 63.8
Mapoly0005s0207 Marchantia polymorpha HOM05D005543 ORTHO05D006584 8.7e-17 91.3 145 32.4
QL02p036792 Quercus lobata HOM05D005543 ORTHO05D006584 1.9e-16 90.1 67 59.7
SGA_v2.0_scaffold130G34341 Striga asiatica HOM05D005543 ORTHO05D006584 6.2e-15 85.1 45 80.0
Pp3c1_40160 Physcomitrium patens HOM05D005543 ORTHO05D006584 6.9e-14 81.6 145 30.3
Cfa018258 Carpinus fangiana HOM05D005543 ORTHO05D006584 4.9e-12 75.5 58 62.1
VMungo1127G1001 Vigna mungo HOM05D005543 ORTHO05D006584 4.9e-12 75.5 68 51.5
Pp3c17_20130 Physcomitrium patens HOM05D005543 ORTHO05D006584 1.6e-10 70.5 144 26.4


User provided reference genes

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