Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002569g0090 Nicotiana tabacum HOM05D005483 ORTHO05D006924 0.0e+00 1146.7 606 100.0
Sopen11g017110 Solanum pennellii HOM05D005483 ORTHO05D006924 3.0e-305 1051.2 599 91.2
Solyc11g033282.1 Solanum lycopersicum HOM05D005483 ORTHO05D006924 2.6e-304 1048.1 599 90.8
Peaxi162Scf00842g00430 Petunia axillaris HOM05D005483 ORTHO05D006924 2.8e-298 1028.1 601 89.7
Dinv17529 Davidia involucrata HOM05D005483 ORTHO05D006924 7.1e-270 933.7 607 79.6
HanXRQChr17g0540341 Helianthus annuus HOM05D005483 ORTHO05D006924 3.4e-264 914.8 604 77.3
Hma1.2p1_1494F.1_g286890 Hydrangea macrophylla HOM05D005483 ORTHO05D006924 5.8e-264 914.1 600 78.3
Lsat_1_v5_gn_3_32540 Lactuca sativa HOM05D005483 ORTHO05D006924 7.6e-264 913.7 600 78.2
CSS0020507 Camellia sinensis var. sinensis HOM05D005483 ORTHO05D006924 1.4e-262 909.4 617 77.6
Cc11_g14910 Coffea canephora HOM05D005483 ORTHO05D006924 1.4e-262 909.4 610 77.7
GSVIVG01001111001 Vitis vinifera HOM05D005483 ORTHO05D006924 1.3e-260 902.9 602 77.9
MSTRG.445 Avicennia marina HOM05D005483 ORTHO05D006924 3.0e-260 901.7 606 75.7
Actinidia30577 Actinidia chinensis HOM05D005483 ORTHO05D006924 3.9e-260 901.4 602 77.9
Migut.K01044 Erythranthe guttata HOM05D005483 ORTHO05D006924 5.1e-260 901.0 610 77.0
Ciclev10004203m.g Citrus clementina HOM05D005483 ORTHO05D006924 1.9e-259 899.0 603 76.9
Thecc.02G190700 Theobroma cacao HOM05D005483 ORTHO05D006924 4.3e-259 897.9 608 76.2
COL.COLO4_08434 Corchorus olitorius HOM05D005483 ORTHO05D006924 3.6e-258 894.8 611 75.8
Manes.08G100200 Manihot esculenta HOM05D005483 ORTHO05D006924 3.6e-258 894.8 602 76.7
SGA_v2.0_scaffold258G45771 Striga asiatica HOM05D005483 ORTHO05D006924 5.3e-257 891.0 611 75.9
PGR119G2201 Punica granatum HOM05D005483 ORTHO05D006924 1.5e-256 889.4 611 75.8
Atru.chr12.1443 Acer truncatum HOM05D005483 ORTHO05D006924 3.4e-256 888.3 610 75.2
TWI18G1022 Tripterygium wilfordii HOM05D005483 ORTHO05D006924 7.6e-256 887.1 610 75.4
MSTRG.8060 Avicennia marina HOM05D005483 ORTHO05D006924 1.3e-255 886.3 609 75.5
SalBow2G2141 Salvia bowleyana HOM05D005483 ORTHO05D006924 6.4e-255 884.0 598 77.6
TAR622G1101 Trochodendron aralioides HOM05D005483 ORTHO05D006924 2.4e-254 882.1 599 75.1
Gohir.A01G020200 Gossypium hirsutum HOM05D005483 ORTHO05D006924 3.2e-254 881.7 613 75.0
ClCG07G012020 Citrullus lanatus HOM05D005483 ORTHO05D006924 4.2e-254 881.3 607 75.1
Cpa.g.sc38.68 Carica papaya HOM05D005483 ORTHO05D006924 5.4e-254 880.9 605 75.2
Gorai.002G021000 Gossypium raimondii HOM05D005483 ORTHO05D006924 4.6e-253 877.9 614 74.6
Gohir.D01G018800 Gossypium hirsutum HOM05D005483 ORTHO05D006924 6.6e-252 874.0 615 74.5
HanXRQChr06g0175451 Helianthus annuus HOM05D005483 ORTHO05D006924 8.7e-252 873.6 601 73.2
CsaV3_4G002140 Cucumis sativus L. HOM05D005483 ORTHO05D006924 1.1e-251 873.2 607 74.6
MELO3C017824.2 Cucumis melo HOM05D005483 ORTHO05D006924 2.5e-251 872.1 608 74.7
ECA246G4063 Erigeron canadensis HOM05D005483 ORTHO05D006924 2.5e-251 872.1 600 73.5
Sed0020947 Sechium edule HOM05D005483 ORTHO05D006924 2.5e-251 872.1 604 75.0
Nn4g22102 Nelumbo nucifera HOM05D005483 ORTHO05D006924 3.3e-251 871.7 602 73.8
Duzib248G1306 Durio zibethinus HOM05D005483 ORTHO05D006924 2.1e-250 869.0 613 73.2
CANSAT01G1825 Cannabis sativa HOM05D005483 ORTHO05D006924 1.4e-249 866.3 602 74.6
Haze_12514 Corylus avellana HOM05D005483 ORTHO05D006924 9.0e-249 863.6 603 74.8
Duzib052G0599 Durio zibethinus HOM05D005483 ORTHO05D006924 7.6e-248 860.5 605 73.7
vmacro01010 Vaccinium macrocarpon HOM05D005483 ORTHO05D006924 1.7e-247 859.4 611 74.3
Cfa009459 Carpinus fangiana HOM05D005483 ORTHO05D006924 2.9e-247 858.6 603 74.5
RcHm_v2.0_Chr4g0428701 Rosa chinensis HOM05D005483 ORTHO05D006924 3.8e-247 858.2 603 73.5
FAN07G1779 Fragaria x ananassa HOM05D005483 ORTHO05D006924 6.4e-247 857.4 600 74.0
Prupe.1G213300 Prunus persica HOM05D005483 ORTHO05D006924 5.4e-246 854.4 605 73.1
FAN17G2071 Fragaria x ananassa HOM05D005483 ORTHO05D006924 7.1e-246 854.0 600 73.7
FvH4_4g22440 Fragaria vesca HOM05D005483 ORTHO05D006924 1.2e-245 853.2 600 73.7
Potri.001G068900 Populus trichocarpa HOM05D005483 ORTHO05D006924 1.6e-245 852.8 599 74.1
Potri.003G161400 Populus trichocarpa HOM05D005483 ORTHO05D006924 1.0e-244 850.1 602 73.9
Rhsim12G0016200 Rhododendron simsii HOM05D005483 ORTHO05D006924 1.0e-244 850.1 610 73.4
FAN12G1583 Fragaria x ananassa HOM05D005483 ORTHO05D006924 1.3e-244 849.7 600 73.3
TWI36G1286 Tripterygium wilfordii HOM05D005483 ORTHO05D006924 1.3e-244 849.7 606 72.9
Nn3g16247 Nelumbo nucifera HOM05D005483 ORTHO05D006924 1.8e-244 849.4 600 72.8
MD16G1142500 Malus domestica HOM05D005483 ORTHO05D006924 8.7e-244 847.0 600 72.3
Sc11g0000050 Simmondsia chinensis HOM05D005483 ORTHO05D006924 2.8e-242 842.0 612 70.9
QL03p048748 Quercus lobata HOM05D005483 ORTHO05D006924 6.2e-242 840.9 610 71.8
CiPaw.06G110300 Carya illinoinensis HOM05D005483 ORTHO05D006924 8.1e-242 840.5 611 73.0
MD13G1132200 Malus domestica HOM05D005483 ORTHO05D006924 1.1e-241 840.1 600 72.0
THA.LOC104825454 Tarenaya hassleriana HOM05D005483 ORTHO05D006924 1.4e-241 839.7 602 71.9
Sabra03G0117300 Salix brachista HOM05D005483 ORTHO05D006924 1.8e-241 839.3 654 68.8
CSS0027672 Camellia sinensis var. sinensis HOM05D005483 ORTHO05D006924 6.9e-241 837.4 605 73.4
AT5G13390 Arabidopsis thaliana HOM05D005483 ORTHO05D006924 1.0e-239 833.6 602 70.8
Sp6g30630 Schrenkiella parvula HOM05D005483 ORTHO05D006924 1.3e-239 833.2 601 71.0
Thhalv10012499m.g Eutrema salsugineum HOM05D005483 ORTHO05D006924 2.9e-239 832.0 601 70.7
AL6G24010 Arabidopsis lyrata HOM05D005483 ORTHO05D006924 6.5e-239 830.9 602 70.6
Carub.0006s1155 Capsella rubella HOM05D005483 ORTHO05D006924 4.2e-238 828.2 601 70.9
Aqoxy5G03055 Aquilegia oxysepala HOM05D005483 ORTHO05D006924 1.0e-236 823.5 612 70.3
Sed0017746 Sechium edule HOM05D005483 ORTHO05D006924 1.0e-236 823.5 606 72.4
BcaNung01159 Brassica carinata HOM05D005483 ORTHO05D006924 2.3e-236 822.4 600 69.7
Aa31LG3G14260 Aethionema arabicum HOM05D005483 ORTHO05D006924 3.0e-236 822.0 609 69.5
CARHR200040 Cardamine hirsuta HOM05D005483 ORTHO05D006924 8.7e-236 820.5 599 70.5
PSO017G1761 Papaver somniferum HOM05D005483 ORTHO05D006924 2.5e-235 818.9 603 70.3
PSO478G1749 Papaver somniferum HOM05D005483 ORTHO05D006924 9.6e-235 817.0 603 70.1
BraA10t44547Z Brassica rapa HOM05D005483 ORTHO05D006924 5.3e-233 811.2 604 69.5
BolC9t59209H Brassica oleracea HOM05D005483 ORTHO05D006924 1.2e-232 810.1 604 69.5
A10p24830 Brassica napus HOM05D005483 ORTHO05D006924 2.0e-232 809.3 604 69.4
C09p63680 Brassica napus HOM05D005483 ORTHO05D006924 3.8e-231 805.1 604 69.5
BolC2t06551H Brassica oleracea HOM05D005483 ORTHO05D006924 1.2e-229 800.0 599 68.6
BraA02t05161Z Brassica rapa HOM05D005483 ORTHO05D006924 3.9e-228 795.0 601 68.7
A02p01880 Brassica napus HOM05D005483 ORTHO05D006924 1.9e-227 792.7 601 68.7
BcaNung01880 Brassica carinata HOM05D005483 ORTHO05D006924 4.8e-226 788.1 599 67.3
Ah.03g135500 Amaranthus hybridus HOM05D005483 ORTHO05D006924 3.1e-225 785.4 603 68.2
Glyma.08G363300 Glycine max HOM05D005483 ORTHO05D006924 4.1e-225 785.0 602 69.8
C02p06100 Brassica napus HOM05D005483 ORTHO05D006924 1.0e-223 780.4 599 66.6
VMungo1383G1684 Vigna mungo HOM05D005483 ORTHO05D006924 1.4e-222 776.5 606 68.2
Lalb_Chr10g0091131 Lupinus albus HOM05D005483 ORTHO05D006924 7.2e-222 774.2 605 67.3
Glyma.18G298700 Glycine max HOM05D005483 ORTHO05D006924 9.4e-222 773.9 601 68.6
Lj1g0002578 Lotus japonicus HOM05D005483 ORTHO05D006924 2.7e-221 772.3 609 68.1
AUR62028835 Chenopodium quinoa HOM05D005483 ORTHO05D006924 3.6e-221 771.9 607 67.7
Phvul.008G003900 Phaseolus vulgaris HOM05D005483 ORTHO05D006924 1.1e-219 766.9 606 67.8
arahy.Tifrunner.gnm1.ann1.H63XD7 Arachis hypogaea HOM05D005483 ORTHO05D006924 4.1e-217 758.4 622 65.6
arahy.Tifrunner.gnm1.ann1.N4LA1V Arachis hypogaea HOM05D005483 ORTHO05D006924 4.1e-217 758.4 622 65.6
TPR.G9702 Trifolium pratense HOM05D005483 ORTHO05D006924 2.9e-215 752.3 618 65.7
Sabra01G0048200 Salix brachista HOM05D005483 ORTHO05D006924 1.1e-214 750.4 504 76.0
EL10Ac2g02397 Beta vulgaris HOM05D005483 ORTHO05D006924 1.4e-212 743.4 602 64.5
CDE05G0204 Ceratophyllum demersum HOM05D005483 ORTHO05D006924 5.9e-208 728.0 591 64.3
BcaC04g19119 Brassica carinata HOM05D005483 ORTHO05D006924 1.1e-206 723.8 620 63.4
Psat3g206760 Pisum sativum HOM05D005483 ORTHO05D006924 1.8e-201 706.4 507 71.8
MBI11_g02503_MAGBIO Magnolia biondii HOM05D005483 ORTHO05D006924 3.5e-200 702.2 592 64.7
Ca_04087_v3 Cicer arietinum L. HOM05D005483 ORTHO05D006924 3.8e-199 698.7 554 66.1
HPP92_020112 Vanilla planifolia HOM05D005483 ORTHO05D006924 3.0e-196 689.1 605 61.0
SEGI_17725 Sequoiadendron giganteum HOM05D005483 ORTHO05D006924 2.9e-191 672.5 595 58.8
AUR62005722 Chenopodium quinoa HOM05D005483 ORTHO05D006924 9.8e-187 657.5 593 60.9
ATR0582G070 Amborella trichopoda HOM05D005483 ORTHO05D006924 8.6e-183 644.4 570 57.9
Medtr7g006760 Medicago truncatula HOM05D005483 ORTHO05D006924 3.3e-182 642.5 597 58.5
Zm00001eb113290 Zea mays HOM05D005483 ORTHO05D006924 4.9e-178 628.6 543 60.8
Eucgr.G01983 Eucalyptus grandis HOM05D005483 ORTHO05D006924 8.3e-178 627.9 397 79.1
Lj6C839G6 Lonicera japonica HOM05D005483 ORTHO05D006924 1.9e-169 600.1 394 76.4
Hma1.2p1_1494F.1_g286880 Hydrangea macrophylla HOM05D005483 ORTHO05D006924 3.2e-169 599.4 421 75.8
Pp3c14_23090 Physcomitrium patens HOM05D005483 ORTHO05D006924 1.7e-154 550.4 579 50.4
AagrBONN_evm.TU.Sc2ySwM_228.3500 Anthoceros agrestis HOM05D005483 ORTHO05D006924 4.9e-154 548.9 546 52.4
Medtr7g406760 Medicago truncatula HOM05D005483 ORTHO05D006924 5.1e-151 538.9 369 72.9
Mapoly0029s0137 Marchantia polymorpha HOM05D005483 ORTHO05D006924 4.0e-148 529.3 565 47.8
TAR374G0614 Trochodendron aralioides HOM05D005483 ORTHO05D006924 4.0e-148 529.3 360 73.1
DCAR_026440 Daucus carota HOM05D005483 ORTHO05D006924 3.4e-147 526.2 436 67.7
SMO116G0229 Selaginella moellendorffii HOM05D005483 ORTHO05D006924 7.1e-145 518.5 540 50.7
CDE05G1761 Ceratophyllum demersum HOM05D005483 ORTHO05D006924 4.2e-137 492.7 398 64.6
RcHm_v2.0_Chr4g0402251 Rosa chinensis HOM05D005483 ORTHO05D006924 1.3e-119 434.5 293 74.1
CBR_g38877 Chara braunii HOM05D005483 ORTHO05D006924 1.1e-108 398.3 577 43.5
unitig_22.g6372 Utricularia gibba HOM05D005483 ORTHO05D006924 4.2e-105 386.3 314 66.2
Actinidia22108 Actinidia chinensis HOM05D005483 ORTHO05D006924 2.3e-87 327.4 335 59.7
unitig_22.g6373 Utricularia gibba HOM05D005483 ORTHO05D006924 5.7e-86 322.8 258 64.7
SGA_v2.0_scaffold98G29280 Striga asiatica HOM05D005483 ORTHO05D007482 2.0e-70 271.2 322 53.1
DCAR_026441 Daucus carota HOM05D005483 ORTHO05D006924 7.5e-54 216.1 141 75.9
Cre01.g018050 Chlamydomonas reinhardtii HOM05D005483 ORTHO05D006924 9.8e-54 215.7 599 29.2
MCO16G196 Micromonas commoda HOM05D005483 ORTHO05D006924 7.5e-46 189.5 582 27.8
Oeu011729.2 Olea europaea HOM05D005483 ORTHO05D000122 4.1e-44 183.7 284 44.4
Lj6C839G5 Lonicera japonica HOM05D005483 ORTHO05D006924 4.6e-43 180.3 149 70.5
RcHm_v2.0_Chr6g0278911 Rosa chinensis HOM05D005483 ORTHO05D006924 2.1e-35 154.8 100 81.0
RcHm_v2.0_Chr2g0133761 Rosa chinensis HOM05D005483 ORTHO05D006924 4.9e-29 133.7 86 83.7
RcHm_v2.0_Chr2g0126951 Rosa chinensis HOM05D005483 ORTHO05D006924 5.4e-28 130.2 86 81.4
Pp3c1_41760 Physcomitrium patens HOM05D005483 ORTHO05D006924 2.6e-14 84.7 135 35.6
RcHm_v2.0_Chr0c29g0501111 Rosa chinensis HOM05D005483 ORTHO05D000581 1.1e-07 62.8 45 80.0
Haze_11131 Corylus avellana HOM05D005420 ORTHO05D006524 7.6e-06 56.6 79 54.4


User provided reference genes

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