Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002567g0160 Nicotiana tabacum HOM05D005230 ORTHO05D006506 5.2e-221 770.8 395 100.0
Nitab4.5_0002161g0080 Nicotiana tabacum HOM05D005230 ORTHO05D006506 5.6e-183 644.4 435 80.5
CAN.G280.6 Capsicum annuum HOM05D005230 ORTHO05D006506 5.2e-173 611.3 463 73.2
PGSC0003DMG400027416 Solanum tuberosum HOM05D005230 ORTHO05D006506 4.9e-171 604.7 463 72.8
Sopen11g029740 Solanum pennellii HOM05D005230 ORTHO05D006506 2.3e-168 595.9 463 71.7
Peaxi162Scf00978g00317 Petunia axillaris HOM05D005230 ORTHO05D006506 3.9e-168 595.1 463 71.7
Solyc11g072090.2 Solanum lycopersicum HOM05D005230 ORTHO05D006506 8.7e-168 594.0 463 71.5
Cc01_g07300 Coffea canephora HOM05D005230 ORTHO05D006506 3.4e-156 555.4 461 67.7
Oeu025950.1 Olea europaea HOM05D005230 ORTHO05D006506 1.6e-153 546.6 459 65.4
CSS0009799 Camellia sinensis var. sinensis HOM05D005230 ORTHO05D006506 5.1e-152 541.6 461 65.5
CSS0035138 Camellia sinensis var. sinensis HOM05D005230 ORTHO05D006506 5.1e-152 541.6 461 65.5
MSTRG.21320 Avicennia marina HOM05D005230 ORTHO05D006506 1.9e-151 539.7 463 65.4
Dinv29329 Davidia involucrata HOM05D005230 ORTHO05D006506 1.5e-148 530.0 461 64.9
SGA_v2.0_scaffold29G12151 Striga asiatica HOM05D005230 ORTHO05D006506 2.6e-148 529.3 462 62.6
Haze_23300 Corylus avellana HOM05D005230 ORTHO05D006506 9.9e-148 527.3 505 60.2
Rhsim13G0231000 Rhododendron simsii HOM05D005230 ORTHO05D006506 1.6e-145 520.0 459 63.8
Lsat_1_v5_gn_2_32160 Lactuca sativa HOM05D005230 ORTHO05D006506 6.0e-145 518.1 459 63.0
Potri.001G271800 Populus trichocarpa HOM05D005230 ORTHO05D006506 8.7e-144 514.2 460 63.3
Potri.009G066400 Populus trichocarpa HOM05D005230 ORTHO05D006506 1.1e-143 513.8 459 62.1
ECA238G4724 Erigeron canadensis HOM05D005230 ORTHO05D006506 3.3e-143 512.3 459 62.3
Oeu032061.2 Olea europaea HOM05D005230 ORTHO05D006506 4.3e-143 511.9 492 60.0
Prupe.4G269500 Prunus persica HOM05D005230 ORTHO05D006506 9.6e-143 510.8 462 62.3
Sabra16G0167000 Salix brachista HOM05D005230 ORTHO05D006506 1.3e-142 510.4 460 62.4
Migut.D00707 Erythranthe guttata HOM05D005230 ORTHO05D006506 3.7e-142 508.8 477 61.2
Hund07409 Selenicereus undatus HOM05D005230 ORTHO05D006506 3.7e-142 508.8 466 61.6
TWI75G0256 Tripterygium wilfordii HOM05D005230 ORTHO05D006506 4.8e-142 508.4 462 61.3
Actinidia06848 Actinidia chinensis HOM05D005230 ORTHO05D006506 1.1e-141 507.3 459 62.5
Manes.05G199900 Manihot esculenta HOM05D005230 ORTHO05D006506 1.1e-141 507.3 462 61.7
Actinidia16258 Actinidia chinensis HOM05D005230 ORTHO05D006506 3.1e-141 505.8 459 62.3
MD03G1163000 Malus domestica HOM05D005230 ORTHO05D006506 3.1e-141 505.8 461 61.6
GSVIVG01020254001 Vitis vinifera HOM05D005230 ORTHO05D006506 9.0e-141 504.2 462 62.6
SalBow6G0054 Salvia bowleyana HOM05D005230 ORTHO05D006506 1.2e-140 503.8 483 58.8
Aqoxy1G00076 Aquilegia oxysepala HOM05D005230 ORTHO05D006506 2.6e-140 502.7 465 61.1
DCAR_031608 Daucus carota HOM05D005230 ORTHO05D006506 2.6e-140 502.7 463 60.0
CANSAT54G1170 Cannabis sativa HOM05D005230 ORTHO05D006506 1.0e-139 500.7 462 61.9
QL01p016185 Quercus lobata HOM05D005230 ORTHO05D006506 1.0e-139 500.7 462 61.9
Sabra09G0049500 Salix brachista HOM05D005230 ORTHO05D006506 8.4e-139 497.7 459 60.3
Nn7g36961 Nelumbo nucifera HOM05D005230 ORTHO05D006506 1.1e-138 497.3 465 60.9
CiPaw.13G147000 Carya illinoinensis HOM05D005230 ORTHO05D006506 3.2e-138 495.7 462 61.3
HanXRQChr13g0402151 Helianthus annuus HOM05D005230 ORTHO05D006506 1.2e-137 493.8 458 59.0
Eucgr.B03758 Eucalyptus grandis HOM05D005230 ORTHO05D006506 4.6e-137 491.9 462 60.2
Haze_23295 Corylus avellana HOM05D005230 ORTHO05D006506 6.0e-137 491.5 462 61.3
COL.COLO4_33253 Corchorus olitorius HOM05D005230 ORTHO05D006506 7.9e-137 491.1 462 60.0
Lj4g0004497 Lotus japonicus HOM05D005230 ORTHO05D006506 2.3e-136 489.6 461 59.9
Atru.chr3.2845 Acer truncatum HOM05D005230 ORTHO05D006506 5.1e-136 488.4 462 60.4
TWI31G0483 Tripterygium wilfordii HOM05D005230 ORTHO05D006506 1.9e-135 486.5 462 60.0
FvH4_1g25390 Fragaria vesca HOM05D005230 ORTHO05D006506 1.3e-134 483.8 462 60.2
Cpa.g.sc34.203 Carica papaya HOM05D005230 ORTHO05D006506 1.6e-134 483.4 461 60.3
FAN23G0348 Fragaria x ananassa HOM05D005230 ORTHO05D006506 2.8e-134 482.6 462 60.0
Manes.01G177100 Manihot esculenta HOM05D005230 ORTHO05D006506 4.8e-134 481.9 463 59.6
Thecc.09G252100 Theobroma cacao HOM05D005230 ORTHO05D006506 4.8e-134 481.9 462 59.1
arahy.Tifrunner.gnm1.ann1.554KFZ Arachis hypogaea HOM05D005230 ORTHO05D006506 8.2e-134 481.1 458 59.4
arahy.Tifrunner.gnm1.ann1.YWPQ0A Arachis hypogaea HOM05D005230 ORTHO05D006506 8.2e-134 481.1 458 59.4
Psat7g073480 Pisum sativum HOM05D005230 ORTHO05D006506 1.4e-133 480.3 460 59.3
EL10Ac4g10073 Beta vulgaris HOM05D005230 ORTHO05D006506 3.1e-133 479.2 463 60.0
ClCG03G014290 Citrullus lanatus HOM05D005230 ORTHO05D006506 3.1e-133 479.2 462 58.9
FAN28G1729 Fragaria x ananassa HOM05D005230 ORTHO05D006506 5.3e-133 478.4 462 59.3
CsaV3_1G041930 Cucumis sativus L. HOM05D005230 ORTHO05D006506 6.9e-133 478.0 462 59.1
RcHm_v2.0_Chr2g0123421 Rosa chinensis HOM05D005230 ORTHO05D006506 1.2e-132 477.2 462 59.7
AUR62006575 Chenopodium quinoa HOM05D005230 ORTHO05D006506 2.0e-132 476.5 464 60.1
AUR62000229 Chenopodium quinoa HOM05D005230 ORTHO05D006506 3.4e-132 475.7 464 59.7
Glyma.08G113500 Glycine max HOM05D005230 ORTHO05D006506 4.5e-132 475.3 460 59.1
FAN19G0408 Fragaria x ananassa HOM05D005230 ORTHO05D006506 2.9e-131 472.6 461 59.0
Lalb_Chr07g0186541 Lupinus albus HOM05D005230 ORTHO05D006506 3.8e-131 472.2 460 58.7
MELO3C015608.2 Cucumis melo HOM05D005230 ORTHO05D006506 6.5e-131 471.5 462 58.4
Duzib168G0825 Durio zibethinus HOM05D005230 ORTHO05D006506 1.4e-130 470.3 462 57.4
Glyma.05G155700 Glycine max HOM05D005230 ORTHO05D006506 1.6e-129 466.8 460 58.3
Ciclev10015197m.g Citrus clementina HOM05D005230 ORTHO05D006506 2.7e-129 466.1 465 58.1
Phvul.002G235800 Phaseolus vulgaris HOM05D005230 ORTHO05D006506 3.6e-129 465.7 460 58.0
TPR.G24369 Trifolium pratense HOM05D005230 ORTHO05D006506 1.0e-128 464.2 459 57.3
Duzib150G1312 Durio zibethinus HOM05D005230 ORTHO05D006506 1.8e-128 463.4 462 57.4
PSO339G0973 Papaver somniferum HOM05D005230 ORTHO05D006506 1.8e-128 463.4 459 56.6
PSO384G0943 Papaver somniferum HOM05D005230 ORTHO05D006506 3.9e-128 462.2 459 56.6
VMungo0251G0349 Vigna mungo HOM05D005230 ORTHO05D006506 3.9e-128 462.2 461 57.9
Cfa009930 Carpinus fangiana HOM05D005230 ORTHO05D006506 1.5e-127 460.3 441 60.1
Lj2C810G6 Lonicera japonica HOM05D005230 ORTHO05D006506 3.3e-127 459.1 463 58.3
Medtr8g085640 Medicago truncatula HOM05D005230 ORTHO05D006506 5.7e-127 458.4 455 57.6
Ca_17953_v3 Cicer arietinum L. HOM05D005230 ORTHO05D006506 1.7e-126 456.8 460 57.4
Sed0024170 Sechium edule HOM05D005230 ORTHO05D006506 2.2e-126 456.4 462 57.4
CDE08G0498 Ceratophyllum demersum HOM05D005230 ORTHO05D006506 2.8e-126 456.1 463 55.5
Aa31LG1G8850 Aethionema arabicum HOM05D005230 ORTHO05D006506 4.1e-125 452.2 462 54.5
MBI13_g00890_MAGBIO Magnolia biondii HOM05D005230 ORTHO05D006506 1.5e-124 450.3 460 55.9
THA.LOC104811208 Tarenaya hassleriana HOM05D005230 ORTHO05D006506 3.4e-124 449.1 460 56.5
A10p20220 Brassica napus HOM05D005230 ORTHO05D006506 2.1e-121 439.9 461 54.0
A02p05570 Brassica napus HOM05D005230 ORTHO05D006506 5.1e-120 435.3 456 54.4
Gorai.004G013700 Gossypium raimondii HOM05D005230 ORTHO05D006506 5.1e-120 435.3 462 56.1
Ah.06g194900 Amaranthus hybridus HOM05D005230 ORTHO05D006506 8.8e-120 434.5 462 55.4
BraA10t44093Z Brassica rapa HOM05D005230 ORTHO05D006506 1.5e-119 433.7 466 53.4
GSVIVG01002283001 Vitis vinifera HOM05D005230 ORTHO05D006506 2.0e-119 433.3 330 70.6
vmacro04223 Vaccinium macrocarpon HOM05D005230 ORTHO05D006506 2.6e-119 433.0 442 57.7
Gohir.D08G019200 Gossypium hirsutum HOM05D005230 ORTHO05D006506 7.4e-119 431.4 462 55.6
BNapus_Darmor_BZH_scaffold_38p02380 Brassica napus HOM05D005230 ORTHO05D006506 1.3e-118 430.6 456 53.9
BolC2t06957H Brassica oleracea HOM05D005230 ORTHO05D006506 2.2e-118 429.9 456 53.9
BraA02t05508Z Brassica rapa HOM05D005230 ORTHO05D006506 2.2e-118 429.9 456 53.7
FAN26G2809 Fragaria x ananassa HOM05D005230 ORTHO05D006506 2.2e-118 429.9 551 49.5
unitig_0.g309 Utricularia gibba HOM05D005230 ORTHO05D006506 8.2e-118 427.9 435 55.6
Gorai.006G123300 Gossypium raimondii HOM05D005230 ORTHO05D006506 1.1e-117 427.6 462 54.1
Gohir.A08G009200 Gossypium hirsutum HOM05D005230 ORTHO05D006506 1.2e-116 424.1 462 55.2
Os06g0338900 Oryza sativa ssp. japonica HOM05D005230 ORTHO05D006506 1.2e-116 424.1 460 53.5
ATR0307G025 Amborella trichopoda HOM05D005230 ORTHO05D006506 1.7e-115 420.2 461 52.7
Gohir.D09G105900 Gossypium hirsutum HOM05D005230 ORTHO05D006506 2.9e-115 419.5 462 53.5
CARHR193430 Cardamine hirsuta HOM05D005230 ORTHO05D006506 8.5e-115 417.9 387 59.4
Gohir.A09G109300 Gossypium hirsutum HOM05D005230 ORTHO05D006506 4.2e-114 415.6 462 52.8
Thhalv10013503m.g Eutrema salsugineum HOM05D005230 ORTHO05D006506 7.2e-114 414.8 389 58.9
HPP92_016891 Vanilla planifolia HOM05D005230 ORTHO05D006506 4.7e-113 412.1 456 52.4
Sp6g24920 Schrenkiella parvula HOM05D005230 ORTHO05D006506 1.8e-112 410.2 387 57.9
AL6G30990 Arabidopsis lyrata HOM05D005230 ORTHO05D006506 2.8e-110 402.9 389 58.4
Sc16g0010870 Simmondsia chinensis HOM05D005230 ORTHO05D006506 4.8e-110 402.1 330 65.2
Carub.0006s1783 Capsella rubella HOM05D005230 ORTHO05D006506 2.4e-109 399.8 461 51.2
AT5G19485 Arabidopsis thaliana HOM05D005230 ORTHO05D006506 1.1e-106 391.0 389 57.1
SEGI_36393 Sequoiadendron giganteum HOM05D005230 ORTHO05D006506 1.7e-91 340.5 460 43.7
PGR102G1412 Punica granatum HOM05D005230 ORTHO05D006506 1.5e-90 337.4 461 46.9
Mapoly0070s0045 Marchantia polymorpha HOM05D005230 ORTHO05D006506 1.8e-85 320.5 468 42.3
Pp3c16_600 Physcomitrium patens HOM05D005230 ORTHO05D006506 5.9e-84 315.5 463 42.8
Zm00001eb051600 Zea mays HOM05D005230 ORTHO05D006506 8.0e-81 305.1 365 50.1
C09p56810 Brassica napus HOM05D005230 ORTHO05D006506 3.5e-76 289.7 292 55.1
Dinv24610 Davidia involucrata HOM05D005230 ORTHO05D006506 1.7e-75 287.3 273 61.5
TAR628G1140 Trochodendron aralioides HOM05D005230 ORTHO05D006506 1.1e-72 278.1 284 55.3
SMO117G0151 Selaginella moellendorffii HOM05D005230 ORTHO05D006506 8.6e-67 258.5 462 34.2
Mapoly0050s0011 Marchantia polymorpha HOM05D005230 ORTHO05D006506 2.8e-49 200.3 330 38.5
Mapoly0070s0046 Marchantia polymorpha HOM05D005230 ORTHO05D006506 8.1e-41 172.2 163 51.5
CBR_g54067 Chara braunii HOM05D005230 ORTHO05D006506 4.5e-39 166.4 460 29.3
VMungo0720G0475 Vigna mungo HOM05D005230 ORTHO05D051605 2.8e-33 147.1 135 60.0
MCO03G336 Micromonas commoda HOM05D005230 ORTHO05D006506 4.8e-33 146.4 264 32.6
BolC9t58535H Brassica oleracea HOM05D005230 ORTHO05D006506 9.0e-32 142.1 182 50.5
Mapoly0050s0012 Marchantia polymorpha HOM05D005230 ORTHO05D006506 1.9e-26 124.4 242 36.4
Cre03.g207825 Chlamydomonas reinhardtii HOM05D005230 ORTHO05D006506 1.4e-24 118.2 500 26.8
CSS0018745 Camellia sinensis var. sinensis HOM05D005230 ORTHO05D006506 1.2e-23 115.2 104 61.5
Gohir.A05G264150 Gossypium hirsutum HOM05D005230 ORTHO05D006506 2.7e-20 104.0 69 73.9
PRCOL_00006600 Prasinoderma coloniale HOM05D005230 ORTHO05D006506 1.0e-19 102.1 322 26.1
BcaC04g24210 Brassica carinata HOM05D005230 ORTHO05D006506 1.8e-19 101.3 66 80.3
Sed0001059 Sechium edule HOM05D005230 ORTHO05D006506 6.7e-19 99.4 100 53.0
Duzib150G0729 Durio zibethinus HOM05D005230 ORTHO05D006506 4.3e-18 96.7 66 75.8
VMungo0251G1518 Vigna mungo HOM05D005230 ORTHO05D051605 5.7e-18 96.3 128 45.3
Psat2g003760 Pisum sativum HOM05D005230 ORTHO05D006506 4.8e-17 93.2 91 57.1
Nn7g36957 Nelumbo nucifera HOM05D005230 ORTHO05D006506 3.1e-16 90.5 55 85.5
VMungo1309G2461 Vigna mungo HOM05D002467 ORTHO05D013374 5.3e-16 89.7 75 66.7
FvH4_4g06340 Fragaria vesca HOM05D005230 ORTHO05D006506 7.7e-15 85.9 69 66.7
VMungo1383G0996 Vigna mungo HOM05D002467 ORTHO05D013374 4.3e-10 70.1 59 62.7
Psat2g028360 Pisum sativum HOM05D005230 ORTHO05D006506 9.7e-10 68.9 111 44.1
THA.LOC104805832 Tarenaya hassleriana HOM05D004145 ORTHO05D004879 2.2e-09 67.8 153 30.1
Dinv24611 Davidia involucrata HOM05D005230 ORTHO05D006506 4.8e-09 66.6 49 77.6
TAR623G0477 Trochodendron aralioides HOM05D005230 ORTHO05D006506 4.8e-09 66.6 37 91.9
Psat5g186320 Pisum sativum HOM05D000280 ORTHO05D004446 7.7e-07 59.3 113 38.9


User provided reference genes

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