Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002567g0140 Nicotiana tabacum HOM05D007713 ORTHO05D009748 1.6e-146 522.7 256 100.0
Nitab4.5_0002161g0070 Nicotiana tabacum HOM05D007713 ORTHO05D009748 4.3e-144 514.6 256 98.4
Sopen11g029730 Solanum pennellii HOM05D007713 ORTHO05D009748 8.5e-132 473.8 259 86.9
Peaxi162Scf00978g00032 Petunia axillaris HOM05D007713 ORTHO05D009748 3.6e-122 441.8 258 83.3
PGSC0003DMG400027417 Solanum tuberosum HOM05D007713 ORTHO05D009748 2.3e-121 439.1 259 82.2
Cc01_g07320 Coffea canephora HOM05D007713 ORTHO05D009748 1.1e-112 410.2 260 75.8
SGA_v2.0_scaffold8G04513 Striga asiatica HOM05D007713 ORTHO05D009748 5.3e-110 401.4 260 74.6
Lj2P811T4 Lonicera japonica HOM05D007713 ORTHO05D009748 1.6e-109 399.8 258 77.5
CSS0029086 Camellia sinensis var. sinensis HOM05D007713 ORTHO05D009748 3.5e-109 398.7 256 75.4
Hma1.2p1_0811F.1_g222080 Hydrangea macrophylla HOM05D007713 ORTHO05D009748 1.5e-107 393.3 261 75.1
Oeu047953.1 Olea europaea HOM05D007713 ORTHO05D009748 2.7e-106 389.0 256 75.4
Haze_23294 Corylus avellana HOM05D007713 ORTHO05D009748 3.6e-106 388.7 273 71.1
Haze_23299 Corylus avellana HOM05D007713 ORTHO05D009748 3.6e-106 388.7 273 71.1
TAR633G2062 Trochodendron aralioides HOM05D007713 ORTHO05D009748 1.4e-105 386.7 255 73.7
Lsat_1_v5_gn_2_31700 Lactuca sativa HOM05D007713 ORTHO05D009748 3.0e-105 385.6 254 72.4
Cfa009929 Carpinus fangiana HOM05D007713 ORTHO05D009748 6.7e-105 384.4 274 70.4
Manes.02G135500 Manihot esculenta HOM05D007713 ORTHO05D009748 6.7e-105 384.4 261 72.8
Solyc11g072080.1 Solanum lycopersicum HOM05D007713 ORTHO05D009748 4.4e-104 381.7 212 85.8
CiPaw.13G147100 Carya illinoinensis HOM05D007713 ORTHO05D009748 5.7e-104 381.3 267 70.8
CiPaw.12G120900 Carya illinoinensis HOM05D007713 ORTHO05D009748 1.1e-102 377.1 267 71.5
Dinv24613 Davidia involucrata HOM05D007713 ORTHO05D009748 3.1e-102 375.6 250 74.0
TAR636G2738 Trochodendron aralioides HOM05D007713 ORTHO05D009748 1.6e-101 373.2 255 69.0
QL01p016194 Quercus lobata HOM05D007713 ORTHO05D009748 2.0e-101 372.9 271 69.0
TWI31G0070 Tripterygium wilfordii HOM05D007713 ORTHO05D009748 2.0e-101 372.9 257 71.6
PGR119G2462 Punica granatum HOM05D007713 ORTHO05D009748 5.9e-101 371.3 258 70.2
MBI19_g04340_MAGBIO Magnolia biondii HOM05D007713 ORTHO05D009748 1.0e-100 370.5 255 71.0
Thecc.09G252200 Theobroma cacao HOM05D007713 ORTHO05D009748 6.5e-100 367.9 264 69.3
EL10Ac4g10074 Beta vulgaris HOM05D007713 ORTHO05D009748 9.4e-99 364.0 255 70.6
Duzib168G2333 Durio zibethinus HOM05D007713 ORTHO05D009748 1.2e-98 363.6 264 69.3
Cpa.g.sc36.103 Carica papaya HOM05D007713 ORTHO05D009748 1.6e-98 363.2 264 68.2
Potri.009G066500 Populus trichocarpa HOM05D007713 ORTHO05D009748 2.1e-98 362.8 263 68.8
Sed0009065 Sechium edule HOM05D007713 ORTHO05D009748 2.1e-98 362.8 271 66.4
PSO765G0028 Papaver somniferum HOM05D007713 ORTHO05D009748 2.7e-98 362.5 267 66.7
Ah.06g194890 Amaranthus hybridus HOM05D007713 ORTHO05D009748 1.0e-97 360.5 255 70.2
AUR62000228 Chenopodium quinoa HOM05D007713 ORTHO05D009748 3.0e-97 359.0 255 69.8
Gohir.D07G123200 Gossypium hirsutum HOM05D007713 ORTHO05D009748 5.2e-97 358.2 267 67.8
AUR62006574 Chenopodium quinoa HOM05D007713 ORTHO05D009748 6.8e-97 357.8 256 69.5
Thhalv10004305m.g Eutrema salsugineum HOM05D007713 ORTHO05D009748 6.8e-97 357.8 257 68.5
HanXRQChr03g0080051 Helianthus annuus HOM05D007713 ORTHO05D009748 8.8e-97 357.5 254 68.9
COL.COLO4_33248 Corchorus olitorius HOM05D007713 ORTHO05D009748 1.2e-96 357.1 265 66.8
Actinidia06981 Actinidia chinensis HOM05D007713 ORTHO05D009748 1.5e-96 356.7 248 71.4
Gorai.001G132900 Gossypium raimondii HOM05D007713 ORTHO05D009748 1.5e-96 356.7 267 67.4
PSO349G0341 Papaver somniferum HOM05D007713 ORTHO05D009748 1.5e-96 356.7 267 66.3
ECA233G2058 Erigeron canadensis HOM05D007713 ORTHO05D009748 2.0e-96 356.3 259 69.1
MELO3C015613.2 Cucumis melo HOM05D007713 ORTHO05D009748 4.4e-96 355.1 267 65.2
CsaV3_1G041980 Cucumis sativus L. HOM05D007713 ORTHO05D009748 4.4e-96 355.1 267 65.2
Potri.001G271900 Populus trichocarpa HOM05D007713 ORTHO05D009748 4.4e-96 355.1 259 68.7
A09p05580 Brassica napus HOM05D007713 ORTHO05D009748 5.7e-96 354.8 258 69.0
BraA09t36199Z Brassica rapa HOM05D007713 ORTHO05D009748 5.7e-96 354.8 258 69.0
Sp2g21080 Schrenkiella parvula HOM05D007713 ORTHO05D009748 5.7e-96 354.8 257 67.7
Gohir.A07G118900 Gossypium hirsutum HOM05D007713 ORTHO05D009748 7.5e-96 354.4 265 67.5
ClCG03G014250 Citrullus lanatus HOM05D007713 ORTHO05D009748 9.8e-96 354.0 272 64.7
BcaC04g23665 Brassica carinata HOM05D007713 ORTHO05D009748 3.7e-95 352.1 258 68.6
C09p06140 Brassica napus HOM05D007713 ORTHO05D009748 3.7e-95 352.1 258 68.6
BcaB04g19704 Brassica carinata HOM05D007713 ORTHO05D009748 4.8e-95 351.7 258 68.2
Sabra16G0167200 Salix brachista HOM05D007713 ORTHO05D009748 1.1e-94 350.5 261 67.0
BolC9t53535H Brassica oleracea HOM05D007713 ORTHO05D009748 1.4e-94 350.1 258 68.6
Lalb_Chr07g0188901 Lupinus albus HOM05D007713 ORTHO05D009748 7.0e-94 347.8 261 66.7
Aa31LG11G9740 Aethionema arabicum HOM05D007713 ORTHO05D009748 2.0e-93 346.3 257 65.8
Carub.0006s2459 Capsella rubella HOM05D007713 ORTHO05D009748 3.5e-93 345.5 259 67.2
Rhsim13G0203800 Rhododendron simsii HOM05D007713 ORTHO05D009748 4.5e-93 345.1 261 67.4
Aqoxy1G02561 Aquilegia oxysepala HOM05D007713 ORTHO05D009748 1.7e-92 343.2 268 64.2
Ca_26656_v3 Cicer arietinum L. HOM05D007713 ORTHO05D009748 6.6e-92 341.3 260 65.8
AT5G26960 Arabidopsis thaliana HOM05D007713 ORTHO05D009748 1.5e-91 340.1 259 65.3
AL6G38870 Arabidopsis lyrata HOM05D007713 ORTHO05D009748 2.5e-91 339.3 259 65.6
Atru.chr3.2844 Acer truncatum HOM05D007713 ORTHO05D009748 7.2e-91 337.8 259 65.3
Lj6g0023778 Lotus japonicus HOM05D007713 ORTHO05D009748 2.8e-90 335.9 265 66.0
CARHR186580 Cardamine hirsuta HOM05D007713 ORTHO05D009748 1.4e-89 333.6 261 64.0
Glyma.20G045100 Glycine max HOM05D007713 ORTHO05D009748 1.7e-84 316.6 268 61.6
Phvul.006G018200 Phaseolus vulgaris HOM05D007713 ORTHO05D009748 6.1e-82 308.1 259 61.0
Medtr3g045210 Medicago truncatula HOM05D007713 ORTHO05D009748 5.2e-81 305.1 258 58.9
TPR.G11930 Trifolium pratense HOM05D007713 ORTHO05D009748 5.8e-80 301.6 264 57.2
VMungo0540G1337 Vigna mungo HOM05D007713 ORTHO05D009748 3.7e-79 298.9 254 61.0
Ciclev10015393m.g Citrus clementina HOM05D007713 ORTHO05D009748 1.5e-72 276.9 257 56.4
Migut.D00708 Erythranthe guttata HOM05D007713 ORTHO05D009748 1.9e-70 270.0 221 65.2
Sc16g0010880 Simmondsia chinensis HOM05D007713 ORTHO05D009748 1.2e-69 267.3 243 56.8
THA.LOC104805019 Tarenaya hassleriana HOM05D007713 ORTHO05D009748 1.7e-68 263.5 263 53.6
SEGI_24675 Sequoiadendron giganteum HOM05D007713 ORTHO05D009748 3.4e-64 249.2 259 48.6
SEGI_20329 Sequoiadendron giganteum HOM05D007713 ORTHO05D009748 1.3e-63 247.3 259 47.9
Os11g0138700 Oryza sativa ssp. japonica HOM05D007713 ORTHO05D009748 1.9e-62 243.4 260 50.0
Os12g0135200 Oryza sativa ssp. japonica HOM05D007713 ORTHO05D009748 1.6e-61 240.4 260 49.2
Mapoly0014s0086 Marchantia polymorpha HOM05D007713 ORTHO05D009748 1.7e-60 236.9 259 46.7
SMO116G0438 Selaginella moellendorffii HOM05D007713 ORTHO05D009748 1.9e-59 233.4 261 44.8
Zm00001eb196340 Zea mays HOM05D007713 ORTHO05D009748 3.6e-58 229.2 259 49.8
Pp3c12_25210 Physcomitrium patens HOM05D007713 ORTHO05D009748 4.7e-58 228.8 260 46.9
GSVIVG01037395001 Vitis vinifera HOM05D007713 ORTHO05D009748 2.4e-57 226.5 162 67.9
CAN.G280.7 Capsicum annuum HOM05D007713 ORTHO05D009748 3.1e-57 226.1 256 50.8
Pp3c4_2880 Physcomitrium patens HOM05D007713 ORTHO05D009748 4.9e-55 218.8 260 45.4
Nn7g36950 Nelumbo nucifera HOM05D007713 ORTHO05D009748 1.4e-38 164.1 131 64.1
HPP92_018395 Vanilla planifolia HOM05D007713 ORTHO05D009748 3.1e-25 119.8 148 45.9
ATR0307G040 Amborella trichopoda HOM05D007713 ORTHO05D009748 3.8e-23 112.8 308 27.9
Mapoly0057s0100 Marchantia polymorpha HOM05D000667 ORTHO05D003095 3.9e-12 76.3 192 31.2
AagrBONN_evm.TU.Sc2ySwM_344.5202 Anthoceros agrestis HOM05D000667 ORTHO05D003095 2.2e-10 70.5 137 35.8
HanXRQChr05g0140521 Helianthus annuus HOM05D007183 ORTHO05D008829 1.2e-08 64.7 121 34.7
CsaV3_7G004260 Cucumis sativus L. HOM05D007183 ORTHO05D008829 1.5e-08 64.3 108 35.2
MELO3C018752.2 Cucumis melo HOM05D007183 ORTHO05D008829 2.0e-08 63.9 109 34.9
ClCG02G001190 Citrullus lanatus HOM05D007183 ORTHO05D008829 2.6e-08 63.5 108 35.2
Sed0026806 Sechium edule HOM05D007183 ORTHO05D008829 3.4e-08 63.2 108 36.1
ATR0796G263 Amborella trichopoda HOM05D007183 ORTHO05D003095 4.5e-08 62.8 104 31.7
PGR004G0270 Punica granatum HOM05D007183 ORTHO05D008829 7.7e-08 62.0 124 35.5
Pp3c22_21630 Physcomitrium patens HOM05D000667 ORTHO05D003843 1.0e-07 61.6 103 32.0
Potri.010G004500 Populus trichocarpa HOM05D000667 ORTHO05D003095 3.8e-07 59.7 124 30.6
TWI63G1715 Tripterygium wilfordii HOM05D007183 ORTHO05D008829 3.8e-07 59.7 106 38.7
unitig_52.g17192 Utricularia gibba HOM05D000667 ORTHO05D003843 3.8e-07 59.7 66 47.0
FvH4_4g21831 Fragaria vesca HOM05D000667 ORTHO05D003095 5.0e-07 59.3 111 33.3
FAN17G1110 Fragaria x ananassa HOM05D000667 ORTHO05D003095 5.0e-07 59.3 111 33.3
FAN12G3400 Fragaria x ananassa HOM05D000667 ORTHO05D003095 6.5e-07 58.9 111 33.3
SEGI_10708 Sequoiadendron giganteum HOM05D000667 ORTHO05D003095 6.5e-07 58.9 68 45.6
Thecc.06G194600 Theobroma cacao HOM05D007183 ORTHO05D008829 6.5e-07 58.9 126 35.7
FAN07G0487 Fragaria x ananassa HOM05D000667 ORTHO05D003095 8.5e-07 58.5 111 33.3
CiPaw.01G126800 Carya illinoinensis HOM05D000667 ORTHO05D003095 1.4e-06 57.8 124 32.3
CBR_g37301 Chara braunii HOM05D000667 ORTHO05D003095 1.9e-06 57.4 83 38.6
arahy.Tifrunner.gnm1.ann1.EK8XNT Arachis hypogaea HOM05D007183 ORTHO05D008829 2.5e-06 57.0 106 34.0
Duzib177G0493 Durio zibethinus HOM05D000667 ORTHO05D003095 3.2e-06 56.6 111 29.7
Sed0021459 Sechium edule HOM05D007183 ORTHO05D008829 3.2e-06 56.6 108 31.5
Eucgr.H04148 Eucalyptus grandis HOM05D000667 ORTHO05D003095 4.2e-06 56.2 111 31.5
RcHm_v2.0_Chr4g0428071 Rosa chinensis HOM05D000667 ORTHO05D003095 4.2e-06 56.2 111 33.3
Zm00001eb241600 Zea mays HOM05D000667 ORTHO05D003843 4.2e-06 56.2 183 29.0
AagrBONN_evm.TU.Sc2ySwM_344.4698 Anthoceros agrestis HOM05D000667 ORTHO05D003095 5.5e-06 55.8 115 34.8
arahy.Tifrunner.gnm1.ann1.B6W742 Arachis hypogaea HOM05D007183 ORTHO05D008829 5.5e-06 55.8 106 33.0
Cc04_g17100 Coffea canephora HOM05D000614 ORTHO05D000463 9.4e-06 55.1 119 29.4
Manes.12G040400 Manihot esculenta HOM05D000667 ORTHO05D003095 9.4e-06 55.1 111 31.5
Nitab4.5_0000170g0260 Nicotiana tabacum HOM05D003852 ORTHO05D003095 9.4e-06 55.1 114 33.3
Nitab4.5_0000807g0200 Nicotiana tabacum HOM05D003852 ORTHO05D003095 9.4e-06 55.1 114 33.3


User provided reference genes

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