Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002561g0080 Nicotiana tabacum HOM05D005560 ORTHO05D006862 1.4e-51 206.1 108 100.0
Nitab4.5_0012592g0010 Nicotiana tabacum HOM05D005560 ORTHO05D006862 1.6e-47 192.6 104 97.1
Solyc01g058280.4 Solanum lycopersicum HOM05D005560 ORTHO05D006862 1.3e-46 189.5 104 94.2
Sopen01g023770 Solanum pennellii HOM05D005560 ORTHO05D006862 1.3e-46 189.5 104 94.2
PGSC0003DMG401029058 Solanum tuberosum HOM05D005560 ORTHO05D006862 6.7e-46 187.2 104 92.3
CAN.G938.2 Capsicum annuum HOM05D005560 ORTHO05D006862 1.3e-44 183.0 104 90.4
Peaxi162Scf00228g00733 Petunia axillaris HOM05D005560 ORTHO05D006862 1.1e-43 179.9 104 89.4
CAN.G1860.1 Capsicum annuum HOM05D005560 ORTHO05D006862 1.5e-42 176.0 104 86.5
Dinv15139 Davidia involucrata HOM05D005560 ORTHO05D006862 7.9e-39 163.7 104 80.8
Hma1.2p1_1400F.1_g280950 Hydrangea macrophylla HOM05D005560 ORTHO05D006862 9.7e-37 156.8 105 76.2
Dinv44258 Davidia involucrata HOM05D005560 ORTHO05D006862 3.7e-36 154.8 104 76.0
DCAR_026978 Daucus carota HOM05D005560 ORTHO05D006862 8.2e-36 153.7 105 76.2
Manes.11G109500 Manihot esculenta HOM05D005560 ORTHO05D006862 8.2e-36 153.7 102 74.5
Nn3g21792 Nelumbo nucifera HOM05D005560 ORTHO05D006862 3.1e-35 151.8 104 70.2
Nn8g38759 Nelumbo nucifera HOM05D005560 ORTHO05D006862 4.1e-35 151.4 105 70.5
TAR371G1140 Trochodendron aralioides HOM05D005560 ORTHO05D006862 4.1e-35 151.4 104 72.1
Lj6E694T0 Lonicera japonica HOM05D005560 ORTHO05D006862 5.3e-35 151.0 104 75.0
Manes.11G060400 Manihot esculenta HOM05D005560 ORTHO05D006862 5.3e-35 151.0 102 73.5
Sc13g0007210 Simmondsia chinensis HOM05D005560 ORTHO05D006862 9.0e-35 150.2 104 71.2
Potri.008G102200 Populus trichocarpa HOM05D005560 ORTHO05D006862 1.5e-34 149.4 104 74.0
CSS0010593 Camellia sinensis var. sinensis HOM05D005560 ORTHO05D006862 7.6e-34 147.1 104 71.2
Cc06_g13180 Coffea canephora HOM05D005560 ORTHO05D006862 1.0e-33 146.7 104 71.2
QL06p012974 Quercus lobata HOM05D005560 ORTHO05D006862 1.0e-33 146.7 104 71.2
vmacro09713 Vaccinium macrocarpon HOM05D005560 ORTHO05D006862 1.0e-33 146.7 104 75.0
Hund11992 Selenicereus undatus HOM05D005560 ORTHO05D006862 1.3e-33 146.4 103 71.8
Haze_01347 Corylus avellana HOM05D005560 ORTHO05D006862 2.9e-33 145.2 104 70.2
COL.COLO4_34571 Corchorus olitorius HOM05D005560 ORTHO05D006862 3.8e-33 144.8 104 70.2
Duzib212G0918 Durio zibethinus HOM05D005560 ORTHO05D006862 3.8e-33 144.8 104 69.2
SalBow8G4800 Salvia bowleyana HOM05D005560 ORTHO05D006862 3.8e-33 144.8 105 65.7
Atru.chr4.3063 Acer truncatum HOM05D005560 ORTHO05D006862 5.0e-33 144.4 104 70.2
Sabra10G0114700 Salix brachista HOM05D005560 ORTHO05D006862 6.5e-33 144.1 104 72.1
CANSAT78G0499 Cannabis sativa HOM05D005560 ORTHO05D006862 1.1e-32 143.3 104 70.2
AUR62016242 Chenopodium quinoa HOM05D005560 ORTHO05D006862 1.1e-32 143.3 99 74.7
Prupe.1G113300 Prunus persica HOM05D005560 ORTHO05D006862 1.4e-32 142.9 104 68.3
Ah.13g071490 Amaranthus hybridus HOM05D005560 ORTHO05D006862 1.9e-32 142.5 96 76.0
Gohir.A02G055900 Gossypium hirsutum HOM05D005560 ORTHO05D006862 1.9e-32 142.5 104 69.2
Gohir.D02G061100 Gossypium hirsutum HOM05D005560 ORTHO05D006862 1.9e-32 142.5 104 69.2
Medtr2g033590 Medicago truncatula HOM05D005560 ORTHO05D006862 1.9e-32 142.5 104 69.2
Medtr2g097970 Medicago truncatula HOM05D005560 ORTHO05D006862 2.5e-32 142.1 104 67.3
QL02p001630 Quercus lobata HOM05D005560 ORTHO05D006862 3.2e-32 141.7 90 75.6
Thecc.04G305600 Theobroma cacao HOM05D005560 ORTHO05D006862 3.2e-32 141.7 105 67.6
Lj6g0013029 Lotus japonicus HOM05D005560 ORTHO05D006862 4.2e-32 141.4 104 67.3
MBI10_g06741_MAGBIO Magnolia biondii HOM05D005560 ORTHO05D006862 4.2e-32 141.4 105 62.9
TWI09G0868 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 4.2e-32 141.4 104 69.2
ClCG03G017390 Citrullus lanatus HOM05D005560 ORTHO05D006862 5.5e-32 141.0 106 68.9
Gohir.A10G174500 Gossypium hirsutum HOM05D005560 ORTHO05D006862 5.5e-32 141.0 104 67.3
Ciclev10006078m.g Citrus clementina HOM05D005560 ORTHO05D006862 7.2e-32 140.6 104 69.2
Lalb_Chr18g0058561 Lupinus albus HOM05D005560 ORTHO05D006862 7.2e-32 140.6 104 65.4
Lalb_Chr20g0120691 Lupinus albus HOM05D005560 ORTHO05D006862 7.2e-32 140.6 104 65.4
CDE06G0356 Ceratophyllum demersum HOM05D005560 ORTHO05D006862 9.3e-32 140.2 104 70.2
MELO3C015305.2 Cucumis melo HOM05D005560 ORTHO05D006862 1.2e-31 139.8 104 70.2
Glyma.09G033400 Glycine max HOM05D005560 ORTHO05D006862 1.2e-31 139.8 105 66.7
Sed0008051 Sechium edule HOM05D005560 ORTHO05D006862 1.2e-31 139.8 99 70.7
arahy.Tifrunner.gnm1.ann1.JWH7Q7 Arachis hypogaea HOM05D005560 ORTHO05D006862 2.7e-31 138.7 104 66.3
FAN07G2916 Fragaria x ananassa HOM05D005560 ORTHO05D006862 2.7e-31 138.7 104 63.5
Sed0013449 Sechium edule HOM05D005560 ORTHO05D006862 2.7e-31 138.7 105 67.6
CAN.G484.71 Capsicum annuum HOM05D005560 ORTHO05D006862 3.6e-31 138.3 104 69.2
arahy.Tifrunner.gnm1.ann1.K4HITJ Arachis hypogaea HOM05D005560 ORTHO05D006862 4.6e-31 137.9 104 66.3
FAN12G4019 Fragaria x ananassa HOM05D005560 ORTHO05D006862 4.6e-31 137.9 104 63.5
Lsat_1_v5_gn_6_116081 Lactuca sativa HOM05D005560 ORTHO05D006862 4.6e-31 137.9 105 66.7
THA.LOC104827102 Tarenaya hassleriana HOM05D005560 ORTHO05D006862 4.6e-31 137.9 104 65.4
Ca_00962_v3 Cicer arietinum L. HOM05D005560 ORTHO05D006862 7.9e-31 137.1 104 65.4
ECA246G4816 Erigeron canadensis HOM05D005560 ORTHO05D006862 7.9e-31 137.1 104 69.2
Glyma.15G138200 Glycine max HOM05D005560 ORTHO05D006862 7.9e-31 137.1 104 66.3
Potri.010G148600 Populus trichocarpa HOM05D005560 ORTHO05D006862 7.9e-31 137.1 104 69.2
GSVIVG01034955001 Vitis vinifera HOM05D001281 ORTHO05D001139 7.9e-31 137.1 104 66.3
CsaV3_1G038810 Cucumis sativus L. HOM05D005560 ORTHO05D006862 1.0e-30 136.7 104 67.3
Psat0s5068g0040 Pisum sativum HOM05D005560 ORTHO05D006862 1.4e-30 136.3 105 63.8
PSO782G0665 Papaver somniferum HOM05D005560 ORTHO05D006862 1.8e-30 136.0 94 70.2
PSO063G2615 Papaver somniferum HOM05D005560 ORTHO05D006862 2.3e-30 135.6 94 69.1
MSTRG.3846 Avicennia marina HOM05D005560 ORTHO05D006862 3.9e-30 134.8 104 62.5
VMungo0540G1255 Vigna mungo HOM05D005560 ORTHO05D006862 5.1e-30 134.4 99 67.7
Glyma.17G036700 Glycine max HOM05D005560 ORTHO05D006862 6.7e-30 134.0 104 66.3
RcHm_v2.0_Chr4g0425981 Rosa chinensis HOM05D005560 ORTHO05D006862 6.7e-30 134.0 104 63.5
TPR.G33875 Trifolium pratense HOM05D005560 ORTHO05D006862 6.7e-30 134.0 104 65.4
TPR.G30159 Trifolium pratense HOM05D005560 ORTHO05D006862 8.8e-30 133.7 95 69.5
CiPaw.01G134900 Carya illinoinensis HOM05D005560 ORTHO05D006862 1.1e-29 133.3 104 67.3
MD13G1149300 Malus domestica HOM05D005560 ORTHO05D006862 1.1e-29 133.3 95 68.4
Phvul.006G120000 Phaseolus vulgaris HOM05D005560 ORTHO05D006862 1.1e-29 133.3 99 66.7
MD16G1149600 Malus domestica HOM05D005560 ORTHO05D006862 1.5e-29 132.9 95 67.4
EL10Ac3g05546 Beta vulgaris HOM05D005560 ORTHO05D006862 1.9e-29 132.5 104 68.3
FvH4_4g20620 Fragaria vesca HOM05D005560 ORTHO05D006862 1.9e-29 132.5 104 61.5
TWI53G0383 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 1.9e-29 132.5 104 63.5
Migut.G00039 Erythranthe guttata HOM05D005560 ORTHO05D006862 2.5e-29 132.1 92 66.3
Oeu048287.1 Olea europaea HOM05D005560 ORTHO05D006862 2.5e-29 132.1 99 63.6
Lsat_1_v5_gn_3_139661 Lactuca sativa HOM05D005560 ORTHO05D006862 3.3e-29 131.7 99 69.7
Cpa.g.sc9.16 Carica papaya HOM05D005560 ORTHO05D006862 4.3e-29 131.3 104 63.5
Thhalv10005160m.g Eutrema salsugineum HOM05D005560 ORTHO05D006862 4.3e-29 131.3 97 70.1
ATR0598G271 Amborella trichopoda HOM05D005560 ORTHO05D006862 5.7e-29 131.0 101 65.3
SGA_v2.0_scaffold157G37338 Striga asiatica HOM05D005560 ORTHO05D006862 5.7e-29 131.0 104 62.5
Sp2g19850 Schrenkiella parvula HOM05D005560 ORTHO05D006862 7.4e-29 130.6 97 70.1
CARHR287970 Cardamine hirsuta HOM05D005560 ORTHO05D006862 9.7e-29 130.2 97 69.1
Migut.O00585 Erythranthe guttata HOM05D005560 ORTHO05D006862 9.7e-29 130.2 102 61.8
Aqoxy5G02923 Aquilegia oxysepala HOM05D005560 ORTHO05D006862 1.3e-28 129.8 99 68.7
Gohir.D10G181000 Gossypium hirsutum HOM05D005560 ORTHO05D006862 1.3e-28 129.8 104 62.5
HanXRQChr01g0022341 Helianthus annuus HOM05D005560 ORTHO05D006862 1.3e-28 129.8 84 75.0
AL8G23330 Arabidopsis lyrata HOM05D005560 ORTHO05D006862 2.2e-28 129.0 97 68.0
CiPaw.02G072600 Carya illinoinensis HOM05D005560 ORTHO05D006862 2.2e-28 129.0 97 66.0
Gorai.005G068700 Gossypium raimondii HOM05D005560 ORTHO05D006862 2.8e-28 128.6 129 55.8
Carub.0008s0942 Capsella rubella HOM05D005560 ORTHO05D006862 4.8e-28 127.9 97 68.0
BcaB04g19617 Brassica carinata HOM05D005560 ORTHO05D006862 6.3e-28 127.5 97 68.0
A09p04870 Brassica napus HOM05D005560 ORTHO05D006862 6.3e-28 127.5 97 68.0
BraA09t36124Z Brassica rapa HOM05D005560 ORTHO05D006862 6.3e-28 127.5 97 68.0
AT5G49540 Arabidopsis thaliana HOM05D005560 ORTHO05D006862 1.1e-27 126.7 97 67.0
BolC7t44528H Brassica oleracea HOM05D005560 ORTHO05D006862 1.4e-27 126.3 98 67.3
BcaC04g23733 Brassica carinata HOM05D005560 ORTHO05D006862 1.8e-27 125.9 97 67.0
A06p38280 Brassica napus HOM05D005560 ORTHO05D006862 1.8e-27 125.9 98 67.3
C09p05260 Brassica napus HOM05D005560 ORTHO05D006862 1.8e-27 125.9 105 63.8
BolC9t53453H Brassica oleracea HOM05D005560 ORTHO05D006862 1.8e-27 125.9 105 63.8
Aa31LG11G8340 Aethionema arabicum HOM05D005560 ORTHO05D006862 2.4e-27 125.6 97 67.0
BraA06t26743Z Brassica rapa HOM05D005560 ORTHO05D006862 2.4e-27 125.6 99 66.7
PGR004G2070 Punica granatum HOM05D005560 ORTHO05D006862 2.4e-27 125.6 104 65.4
SEGI_13216 Sequoiadendron giganteum HOM05D005560 ORTHO05D006862 4.1e-27 124.8 99 59.6
Nitab4.5_0008521g0010 Nicotiana tabacum HOM05D005560 ORTHO05D006862 5.3e-27 124.4 71 90.1
HPP92_015326 Vanilla planifolia HOM05D005560 ORTHO05D006862 6.9e-27 124.0 100 60.0
Gorai.011G202500 Gossypium raimondii HOM05D005560 ORTHO05D006862 9.1e-27 123.6 104 60.6
Eucgr.F02752 Eucalyptus grandis HOM05D005560 ORTHO05D006862 1.5e-26 122.9 120 58.3
THA.LOC104818873 Tarenaya hassleriana HOM05D005560 ORTHO05D006862 3.4e-26 121.7 104 58.7
Zm00001eb295100 Zea mays HOM05D005560 ORTHO05D006862 2.5e-24 115.5 86 59.3
AUR62032779 Chenopodium quinoa HOM05D005560 ORTHO05D006862 4.2e-24 114.8 66 81.8
CDE07G1301 Ceratophyllum demersum HOM05D005560 ORTHO05D006862 5.5e-24 114.4 72 79.2
Zm00001eb343110 Zea mays HOM05D005560 ORTHO05D006862 9.4e-24 113.6 86 58.1
unitig_37.g12416 Utricularia gibba HOM05D005560 ORTHO05D007484 4.7e-23 111.3 87 59.8
HanXRQChr10g0310551 Helianthus annuus HOM05D005560 ORTHO05D006862 7.9e-23 110.5 72 76.4
Mapoly0008s0274 Marchantia polymorpha HOM05D005560 ORTHO05D006862 1.5e-21 106.3 93 50.5
Oeu052158.1 Olea europaea HOM05D005560 ORTHO05D006862 5.7e-21 104.4 105 54.3
AagrBONN_evm.TU.Sc2ySwM_362.2649 Anthoceros agrestis HOM05D005560 ORTHO05D006862 1.8e-19 99.4 92 52.2
arahy.Tifrunner.gnm1.ann1.CCFX3U Arachis hypogaea HOM05D001281 ORTHO05D001139 1.5e-18 96.3 98 57.1
SMO117G0178 Selaginella moellendorffii HOM05D005560 ORTHO05D006862 2.9e-17 92.0 85 50.6
Nn8g41304 Nelumbo nucifera HOM05D005560 ORTHO05D006862 5.0e-17 91.3 60 73.3
AagrBONN_evm.TU.Sc2ySwM_340.65 Anthoceros agrestis HOM05D005560 ORTHO05D006862 7.2e-16 87.4 76 55.3
MD01G1183100 Malus domestica HOM05D005560 ORTHO05D006862 6.7e-14 80.9 60 61.7
CBR_g22909 Chara braunii HOM05D005560 ORTHO05D006862 8.8e-14 80.5 78 46.2
Nn1g07816 Nelumbo nucifera HOM05D005560 ORTHO05D006862 2.6e-13 79.0 54 68.5
TWI73G0491 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 1.8e-11 72.8 51 64.7
arahy.Tifrunner.gnm1.ann1.NI9QGM Arachis hypogaea HOM05D005560 ORTHO05D006862 2.0e-10 69.3 78 50.0
PRCOL_00001634 Prasinoderma coloniale HOM05D005560 ORTHO05D006862 9.4e-08 60.5 92 41.3


User provided reference genes

Program Settings