Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002561g0070 Nicotiana tabacum HOM05D002661 ORTHO05D002786 1.2e-44 183.0 102 100.0
Peaxi162Scf00438g00717 Petunia axillaris HOM05D002661 ORTHO05D002786 9.5e-18 93.6 147 46.3
Nitab4.5_0000337g0140 Nicotiana tabacum HOM05D002661 ORTHO05D002786 1.2e-15 86.7 147 43.5
Solyc04g081390.4 Solanum lycopersicum HOM05D002661 ORTHO05D002786 1.5e-15 86.3 131 45.8
PGSC0003DMG400009934 Solanum tuberosum HOM05D002661 ORTHO05D002786 9.8e-15 83.6 129 45.0
Peaxi162Scf00400g00048 Petunia axillaris HOM05D002661 ORTHO05D002786 1.3e-14 83.2 142 44.4
Nn5g30157 Nelumbo nucifera HOM05D002661 ORTHO05D002786 4.9e-14 81.3 149 40.9
Nitab4.5_0010507g0010 Nicotiana tabacum HOM05D002661 ORTHO05D002786 4.9e-14 81.3 147 43.5
Dinv39512 Davidia involucrata HOM05D002661 ORTHO05D002786 1.4e-13 79.7 130 43.1
Haze_22627 Corylus avellana HOM05D002661 ORTHO05D002786 5.4e-13 77.8 151 39.7
Potri.002G023000 Populus trichocarpa HOM05D002661 ORTHO05D002786 5.4e-13 77.8 146 41.1
Cfa013943 Carpinus fangiana HOM05D002661 ORTHO05D002786 2.0e-12 75.9 147 40.1
HanXRQChr14g0430361 Helianthus annuus HOM05D002661 ORTHO05D002786 2.0e-12 75.9 130 43.1
Rhsim07G0246900 Rhododendron simsii HOM05D002661 ORTHO05D002786 2.7e-12 75.5 148 39.2
COL.COLO4_26155 Corchorus olitorius HOM05D002661 ORTHO05D002786 1.0e-11 73.6 151 37.7
Dinv31838 Davidia involucrata HOM05D002661 ORTHO05D002786 1.3e-11 73.2 126 41.3
Sabra05G0184300 Salix brachista HOM05D002661 ORTHO05D002786 1.3e-11 73.2 141 41.8
Duzib041G0251 Durio zibethinus HOM05D002661 ORTHO05D002786 2.3e-11 72.4 146 37.7
QL02p011493 Quercus lobata HOM05D002661 ORTHO05D002786 6.6e-11 70.9 140 39.3
CAN.G311.24 Capsicum annuum HOM05D002661 ORTHO05D002786 1.5e-10 69.7 126 47.6
Ciclev10002504m.g Citrus clementina HOM05D002661 ORTHO05D002786 1.9e-10 69.3 147 38.8
Lj4A25T51 Lonicera japonica HOM05D002661 ORTHO05D002786 2.5e-10 68.9 145 37.2
TAR381G1099 Trochodendron aralioides HOM05D002661 ORTHO05D002786 2.5e-10 68.9 146 38.4
Sopen04g035000 Solanum pennellii HOM05D002661 ORTHO05D002786 3.3e-10 68.6 52 76.9
vmacro04348 Vaccinium macrocarpon HOM05D002661 ORTHO05D002786 3.3e-10 68.6 152 34.9
Aqoxy4G02812 Aquilegia oxysepala HOM05D002661 ORTHO05D002786 4.3e-10 68.2 143 37.1
AUR62033833 Chenopodium quinoa HOM05D002661 ORTHO05D002786 5.6e-10 67.8 147 34.7
Gohir.A05G257100 Gossypium hirsutum HOM05D002661 ORTHO05D002786 5.6e-10 67.8 144 36.1
Gohir.D05G258600 Gossypium hirsutum HOM05D002661 ORTHO05D002786 5.6e-10 67.8 145 35.2
Gorai.009G270100 Gossypium raimondii HOM05D002661 ORTHO05D002786 5.6e-10 67.8 145 35.2
Lsat_1_v5_gn_2_10300 Lactuca sativa HOM05D002661 ORTHO05D002786 7.3e-10 67.4 140 37.9
Psat5g013240 Pisum sativum HOM05D002661 ORTHO05D002786 1.6e-09 66.2 145 36.6
DCAR_013866 Daucus carota HOM05D002661 ORTHO05D002786 2.8e-09 65.5 152 32.9
MBI05_g15357_MAGBIO Magnolia biondii HOM05D002661 ORTHO05D002786 2.8e-09 65.5 145 34.5
MD08G1013500 Malus domestica HOM05D002661 ORTHO05D002786 4.7e-09 64.7 147 36.1
Duzib093G0349 Durio zibethinus HOM05D002661 ORTHO05D002786 6.2e-09 64.3 149 36.9
Medtr3g113810 Medicago truncatula HOM05D002661 ORTHO05D002786 6.2e-09 64.3 143 39.2
Cc10_g01730 Coffea canephora HOM05D002661 ORTHO05D002786 1.1e-08 63.5 59 54.2
Potri.005G238500 Populus trichocarpa HOM05D002661 ORTHO05D002786 1.1e-08 63.5 56 58.9
CSS0015710 Camellia sinensis var. sinensis HOM05D002661 ORTHO05D002786 1.4e-08 63.2 144 36.1
PSO675G6292 Papaver somniferum HOM05D002661 ORTHO05D002786 3.1e-08 62.0 47 70.2
Phvul.009G016600 Phaseolus vulgaris HOM05D002661 ORTHO05D002786 3.1e-08 62.0 143 37.1
AUR62035749 Chenopodium quinoa HOM05D002661 ORTHO05D002786 4.0e-08 61.6 146 37.0
Manes.05G148000 Manihot esculenta HOM05D002661 ORTHO05D002786 4.0e-08 61.6 139 38.8
EL10Ac1g02294 Beta vulgaris HOM05D002661 ORTHO05D002786 5.2e-08 61.2 60 53.3
Sabra02G0018800 Salix brachista HOM05D002661 ORTHO05D002786 5.2e-08 61.2 146 39.0
FAN20G0494 Fragaria x ananassa HOM05D002661 ORTHO05D002786 6.8e-08 60.8 53 58.5
Actinidia16982 Actinidia chinensis HOM05D002661 ORTHO05D002786 8.9e-08 60.5 54 63.0
Prupe.1G366100 Prunus persica HOM05D002661 ORTHO05D002786 8.9e-08 60.5 151 35.8
SalBow7G2684 Salvia bowleyana HOM05D002661 ORTHO05D002786 8.9e-08 60.5 111 40.5
Thecc.08G043600 Theobroma cacao HOM05D002661 ORTHO05D002786 1.2e-07 60.1 146 34.9
MELO3C003756.2 Cucumis melo HOM05D002661 ORTHO05D002786 3.4e-07 58.5 52 61.5
TAR625G0479 Trochodendron aralioides HOM05D002661 ORTHO05D002786 3.4e-07 58.5 148 37.2
CiPaw.08G066000 Carya illinoinensis HOM05D002661 ORTHO05D002786 7.5e-07 57.4 146 35.6
Ca_15484_v3 Cicer arietinum L. HOM05D002661 ORTHO05D002786 7.5e-07 57.4 158 34.2
arahy.Tifrunner.gnm1.ann1.TT5BBF Arachis hypogaea HOM05D002661 ORTHO05D002786 9.8e-07 57.0 58 51.7
TPR.G34544 Trifolium pratense HOM05D002661 ORTHO05D002786 1.3e-06 56.6 145 35.2
Actinidia15417 Actinidia chinensis HOM05D002661 ORTHO05D002786 1.7e-06 56.2 140 35.0
CAN.G1735.2 Capsicum annuum HOM05D002661 ORTHO05D002786 1.7e-06 56.2 153 32.7
Cpa.g.sc26.35 Carica papaya HOM05D002661 ORTHO05D002786 1.7e-06 56.2 139 34.5
Hma1.2p1_0956F.1_g241360 Hydrangea macrophylla HOM05D002661 ORTHO05D002786 1.7e-06 56.2 53 54.7
Peaxi162Scf00083g00420 Petunia axillaris HOM05D002661 ORTHO05D002786 1.7e-06 56.2 64 48.4
Peaxi162Scf00083g00513 Petunia axillaris HOM05D002661 ORTHO05D002786 1.7e-06 56.2 64 48.4
Sed0015402 Sechium edule HOM05D002661 ORTHO05D002786 1.7e-06 56.2 47 61.7
arahy.Tifrunner.gnm1.ann1.T25A5J Arachis hypogaea HOM05D002661 ORTHO05D002786 2.2e-06 55.8 58 50.0
Hma1.2p1_0956F.1_g241350 Hydrangea macrophylla HOM05D002661 ORTHO05D002786 2.2e-06 55.8 47 59.6
Hma1.2p1_2239F.1_g317813 Hydrangea macrophylla HOM05D002661 ORTHO05D002786 2.2e-06 55.8 47 59.6
Haze_03766 Corylus avellana HOM05D002661 ORTHO05D002786 2.9e-06 55.5 133 36.1
DCAR_009925 Daucus carota HOM05D023667 ORTHO05D002786 2.9e-06 55.5 66 47.0
Cpa.g.sc6.246 Carica papaya HOM05D002661 ORTHO05D002786 3.7e-06 55.1 47 59.6
ClCG05G018310 Citrullus lanatus HOM05D002661 ORTHO05D002786 3.7e-06 55.1 52 59.6
GSVIVG01018786001 Vitis vinifera HOM05D002668 ORTHO05D003295 3.7e-06 55.1 55 58.2
MSTRG.2712 Avicennia marina HOM05D002661 ORTHO05D002786 4.9e-06 54.7 57 50.9
SalBow3G1681 Salvia bowleyana HOM05D002661 ORTHO05D002786 4.9e-06 54.7 52 55.8
TWI56G0437 Tripterygium wilfordii HOM05D002661 ORTHO05D002786 6.4e-06 54.3 156 35.9
CDE05G2590 Ceratophyllum demersum HOM05D002661 ORTHO05D002786 8.3e-06 53.9 58 51.7
Dinv40084 Davidia involucrata HOM05D002661 ORTHO05D002786 8.3e-06 53.9 54 53.7
Eucgr.F00599 Eucalyptus grandis HOM05D002661 ORTHO05D002786 8.3e-06 53.9 62 51.6


User provided reference genes

Program Settings