Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002561g0060 Nicotiana tabacum HOM05D005261 ORTHO05D006180 8.8e-204 713.4 354 100.0
Nitab4.5_0001915g0120 Nicotiana tabacum HOM05D005261 ORTHO05D006180 9.4e-198 693.3 355 98.0
Nitab4.5_0003428g0020 Nicotiana tabacum HOM05D005261 ORTHO05D006180 1.2e-197 693.0 354 97.5
Sopen04g028560 Solanum pennellii HOM05D005261 ORTHO05D006180 3.5e-184 648.3 354 91.0
CAN.G617.12 Capsicum annuum HOM05D005261 ORTHO05D006180 5.9e-184 647.5 354 91.0
Solyc04g072390.3 Solanum lycopersicum HOM05D005261 ORTHO05D006180 7.7e-184 647.1 354 90.7
Peaxi162Scf00756g00436 Petunia axillaris HOM05D005261 ORTHO05D006180 6.8e-164 580.9 321 90.7
Dinv44727 Davidia involucrata HOM05D005261 ORTHO05D006180 1.2e-149 533.5 357 75.6
Cc10_g05970 Coffea canephora HOM05D005261 ORTHO05D006180 2.8e-149 532.3 359 75.2
Dinv13059 Davidia involucrata HOM05D005261 ORTHO05D006180 2.7e-144 515.8 353 74.5
GSVIVG01008967001 Vitis vinifera HOM05D005261 ORTHO05D006180 9.5e-142 507.3 354 73.2
Actinidia31491 Actinidia chinensis HOM05D005261 ORTHO05D006180 1.2e-141 506.9 327 74.9
Gorai.010G045400 Gossypium raimondii HOM05D005261 ORTHO05D006180 4.0e-140 501.9 360 72.8
Cfa015937 Carpinus fangiana HOM05D005261 ORTHO05D006180 1.5e-139 500.0 354 71.2
Gohir.D06G040600 Gossypium hirsutum HOM05D005261 ORTHO05D006180 1.5e-139 500.0 364 72.0
Atru.chr13.1289 Acer truncatum HOM05D005261 ORTHO05D006180 7.6e-139 497.7 358 71.8
Prupe.1G509000 Prunus persica HOM05D005261 ORTHO05D006180 7.6e-139 497.7 354 70.6
Duzib093G0733 Durio zibethinus HOM05D005261 ORTHO05D006180 9.9e-139 497.3 355 70.7
MSTRG.24247 Avicennia marina HOM05D005261 ORTHO05D006180 1.3e-138 496.9 356 69.4
Ciclev10001407m.g Citrus clementina HOM05D005261 ORTHO05D006180 1.3e-138 496.9 357 70.9
CiPaw.06G023200 Carya illinoinensis HOM05D005261 ORTHO05D006180 1.7e-138 496.5 354 71.2
RcHm_v2.0_Chr7g0240261 Rosa chinensis HOM05D005261 ORTHO05D006180 2.2e-138 496.1 355 70.4
vmacro04773 Vaccinium macrocarpon HOM05D005261 ORTHO05D006180 4.9e-138 495.0 355 69.9
QL12p035629 Quercus lobata HOM05D005261 ORTHO05D006180 8.4e-138 494.2 350 72.0
FAN08G3477 Fragaria x ananassa HOM05D005261 ORTHO05D006180 1.1e-137 493.8 355 70.4
Thecc.08G114100 Theobroma cacao HOM05D005261 ORTHO05D006180 1.1e-137 493.8 355 71.0
TWI36G1273 Tripterygium wilfordii HOM05D005261 ORTHO05D006180 1.4e-137 493.4 323 76.2
FvH4_5g38270 Fragaria vesca HOM05D005261 ORTHO05D006180 1.9e-137 493.0 355 70.4
FAN04G2261 Fragaria x ananassa HOM05D005261 ORTHO05D006180 2.4e-137 492.7 355 70.1
Rhsim07G0199400 Rhododendron simsii HOM05D005261 ORTHO05D006180 4.1e-137 491.9 355 69.9
RhsimUnG0073100 Rhododendron simsii HOM05D005261 ORTHO05D006180 5.4e-137 491.5 355 69.6
Manes.02G212400 Manihot esculenta HOM05D005261 ORTHO05D006180 9.2e-137 490.7 325 74.5
FAN13G1502 Fragaria x ananassa HOM05D005261 ORTHO05D006180 1.6e-136 490.0 355 69.9
FAN18G3314 Fragaria x ananassa HOM05D005261 ORTHO05D006180 1.6e-136 490.0 355 69.6
Hma1.2p1_0276F.1_g111380 Hydrangea macrophylla HOM05D005261 ORTHO05D006180 3.9e-135 485.3 317 75.7
Cpa.g.sc77.98 Carica papaya HOM05D005261 ORTHO05D006180 6.6e-135 484.6 357 70.9
MD08G1174900 Malus domestica HOM05D005261 ORTHO05D006180 1.1e-134 483.8 355 68.5
Aqoxy6G00521 Aquilegia oxysepala HOM05D005261 ORTHO05D006180 5.6e-134 481.5 353 68.0
Sabra02G0072100 Salix brachista HOM05D005261 ORTHO05D006180 2.8e-133 479.2 355 69.3
DCAR_023858 Daucus carota HOM05D005261 ORTHO05D006180 4.7e-133 478.4 326 71.5
CANSAT54G1848 Cannabis sativa HOM05D005261 ORTHO05D006180 8.1e-133 477.6 359 67.1
Eucgr.H00927 Eucalyptus grandis HOM05D005261 ORTHO05D006180 5.2e-132 474.9 322 72.4
Haze_00548 Corylus avellana HOM05D005261 ORTHO05D006180 9.0e-132 474.2 385 64.7
EL10Ac1g01697 Beta vulgaris HOM05D005261 ORTHO05D006180 2.6e-131 472.6 321 72.6
Sed0017821 Sechium edule HOM05D005261 ORTHO05D006180 2.6e-131 472.6 320 72.5
CsaV3_2G033630 Cucumis sativus L. HOM05D005261 ORTHO05D006180 2.2e-130 469.5 352 67.6
VMungo1309G2277 Vigna mungo HOM05D005261 ORTHO05D006180 2.9e-130 469.2 357 66.9
PGR042G1365 Punica granatum HOM05D005261 ORTHO05D006180 8.4e-130 467.6 319 73.0
MELO3C008135.2 Cucumis melo HOM05D005261 ORTHO05D006180 1.4e-129 466.8 353 66.0
HanXRQChr02g0043751 Helianthus annuus HOM05D005261 ORTHO05D006180 1.4e-129 466.8 324 71.0
Phvul.009G027100 Phaseolus vulgaris HOM05D005261 ORTHO05D006180 2.4e-129 466.1 357 66.7
ClCG11G007980 Citrullus lanatus HOM05D005261 ORTHO05D006180 1.2e-128 463.8 379 63.3
arahy.Tifrunner.gnm1.ann1.S5D643 Arachis hypogaea HOM05D005261 ORTHO05D006180 1.6e-128 463.4 321 70.7
arahy.Tifrunner.gnm1.ann1.232HHD Arachis hypogaea HOM05D005261 ORTHO05D006180 3.5e-128 462.2 321 70.7
Glyma.06G107100 Glycine max HOM05D005261 ORTHO05D006180 3.5e-128 462.2 357 66.1
Glyma.04G107300 Glycine max HOM05D005261 ORTHO05D006180 4.6e-128 461.8 355 65.9
MBI02_g34268_MAGBIO Magnolia biondii HOM05D005261 ORTHO05D006180 6.0e-128 461.5 331 69.5
Duzib041G0715 Durio zibethinus HOM05D005261 ORTHO05D006180 7.8e-128 461.1 348 68.7
SGA_v2.0_scaffold12G05968 Striga asiatica HOM05D005261 ORTHO05D006180 1.3e-127 460.3 341 67.2
PSO447G0033 Papaver somniferum HOM05D005261 ORTHO05D006180 3.9e-127 458.8 352 65.3
PSO541G3947 Papaver somniferum HOM05D005261 ORTHO05D006180 3.9e-127 458.8 353 65.2
PSO675G0151 Papaver somniferum HOM05D005261 ORTHO05D006180 6.6e-127 458.0 353 64.9
Medtr2g460880 Medicago truncatula HOM05D005261 ORTHO05D006180 1.9e-126 456.4 321 70.7
THA.LOC104813129 Tarenaya hassleriana HOM05D005261 ORTHO05D006180 3.3e-126 455.7 335 69.9
Ah.03g139490 Amaranthus hybridus HOM05D005261 ORTHO05D006180 4.3e-126 455.3 321 68.5
Migut.N03156 Erythranthe guttata HOM05D005261 ORTHO05D006180 7.3e-126 454.5 335 67.5
Gohir.A06G039700 Gossypium hirsutum HOM05D005261 ORTHO05D006180 1.3e-125 453.8 360 67.8
Ca_26314_v3 Cicer arietinum L. HOM05D005261 ORTHO05D006180 3.6e-125 452.2 317 71.6
Sc14g0001090 Simmondsia chinensis HOM05D005261 ORTHO05D006180 3.6e-125 452.2 319 70.5
TPR.G16249 Trifolium pratense HOM05D005261 ORTHO05D006180 2.4e-124 449.5 322 69.9
TWI56G1213 Tripterygium wilfordii HOM05D005261 ORTHO05D006180 6.9e-124 448.0 330 70.3
Psat5g135960 Pisum sativum HOM05D005261 ORTHO05D006180 9.0e-124 447.6 327 68.5
Aa31LG6G9000 Aethionema arabicum HOM05D005261 ORTHO05D006180 3.4e-123 445.7 366 63.1
AL1G50930 Arabidopsis lyrata HOM05D005261 ORTHO05D006180 1.3e-122 443.7 373 62.5
CARHR034970 Cardamine hirsuta HOM05D005261 ORTHO05D006180 1.3e-122 443.7 346 66.2
Os02g0750500 Oryza sativa ssp. japonica HOM05D005261 ORTHO05D006180 1.7e-122 443.4 348 64.7
Sp1g30710 Schrenkiella parvula HOM05D005261 ORTHO05D006180 2.9e-122 442.6 364 63.2
Thhalv10004311m.g Eutrema salsugineum HOM05D005261 ORTHO05D006180 3.8e-122 442.2 357 64.1
SEGI_02326 Sequoiadendron giganteum HOM05D005261 ORTHO05D006180 4.9e-122 441.8 326 66.3
Carub.0001s3363 Capsella rubella HOM05D005261 ORTHO05D006180 8.4e-122 441.0 377 62.3
Lj1g0011675 Lotus japonicus HOM05D005261 ORTHO05D006180 1.1e-121 440.7 351 65.2
BraA05t20051Z Brassica rapa HOM05D005261 ORTHO05D006180 1.9e-121 439.9 330 67.3
Zm00001eb255040 Zea mays HOM05D005261 ORTHO05D006180 4.2e-121 438.7 332 65.4
Lsat_1_v5_gn_1_3980 Lactuca sativa HOM05D005261 ORTHO05D006180 5.4e-121 438.3 347 62.5
unitig_22.g6794 Utricularia gibba HOM05D005261 ORTHO05D006180 9.3e-121 437.6 318 67.6
AT1G36310 Arabidopsis thaliana HOM05D005261 ORTHO05D006180 1.2e-120 437.2 373 62.5
BcaC02g11530 Brassica carinata HOM05D005261 ORTHO05D006180 1.6e-120 436.8 340 66.5
BcaB03g13642 Brassica carinata HOM05D005261 ORTHO05D006180 3.5e-120 435.6 360 62.8
A05p11060 Brassica napus HOM05D005261 ORTHO05D006180 3.5e-120 435.6 326 67.8
BcaC07g37496 Brassica carinata HOM05D005261 ORTHO05D006180 6.0e-120 434.9 347 64.8
BolC8t47816H Brassica oleracea HOM05D005261 ORTHO05D006180 6.0e-120 434.9 347 64.8
CDE02G3063 Ceratophyllum demersum HOM05D005261 ORTHO05D006180 7.9e-120 434.5 329 66.3
A08p07950 Brassica napus HOM05D005261 ORTHO05D006180 1.8e-119 433.3 331 67.4
BraA08t32817Z Brassica rapa HOM05D005261 ORTHO05D006180 1.8e-119 433.3 331 67.4
C04p14350 Brassica napus HOM05D005261 ORTHO05D006180 3.0e-119 432.6 338 66.0
Oeu020872.1 Olea europaea HOM05D005261 ORTHO05D006180 8.7e-119 431.0 314 69.1
Nn5g28978 Nelumbo nucifera HOM05D005261 ORTHO05D006180 1.5e-118 430.3 299 73.2
TAR625G1239 Trochodendron aralioides HOM05D005261 ORTHO05D006180 1.9e-118 429.9 328 68.3
BolC4t23021H Brassica oleracea HOM05D005261 ORTHO05D006180 9.0e-116 421.0 331 66.8
HPP92_001925 Vanilla planifolia HOM05D005261 ORTHO05D006180 9.9e-115 417.5 328 63.7
Potri.002G091300 Populus trichocarpa HOM05D005261 ORTHO05D006180 1.7e-114 416.8 380 60.5
SHI24797 Sapria himalayana HOM05D000002 ORTHO05D000001 4.9e-114 415.2 343 63.0
AUR62033704 Chenopodium quinoa HOM05D005261 ORTHO05D006180 1.9e-113 413.3 328 65.9
AUR62036786 Chenopodium quinoa HOM05D005261 ORTHO05D006180 4.2e-113 412.1 330 65.2
AUR62022337 Chenopodium quinoa HOM05D005261 ORTHO05D006180 1.3e-111 407.1 292 68.5
AUR62034370 Chenopodium quinoa HOM05D005261 ORTHO05D006180 3.0e-111 406.0 292 68.5
SalBow8G1448 Salvia bowleyana HOM05D005261 ORTHO05D006180 4.3e-110 402.1 406 54.2
ATR0564G365 Amborella trichopoda HOM05D005261 ORTHO05D006180 5.6e-110 401.7 307 65.1
Mapoly0189s0001 Marchantia polymorpha HOM05D005261 ORTHO05D006180 1.0e-106 391.0 319 60.5
AagrBONN_evm.TU.Sc2ySwM_228.1177 Anthoceros agrestis HOM05D005261 ORTHO05D006180 2.2e-106 389.8 318 59.4
Pp3c8_16200 Physcomitrium patens HOM05D005261 ORTHO05D006180 1.6e-104 383.6 316 60.1
SMO361G0461 Selaginella moellendorffii HOM05D005261 ORTHO05D006180 2.3e-103 379.8 314 58.6
SHI53236 Sapria himalayana HOM05D005261 ORTHO05D006180 1.4e-100 370.5 350 56.9
Lalb_Chr17g0344051 Lupinus albus HOM05D005261 ORTHO05D006180 6.5e-90 335.1 234 71.4
Hma1.2p1_0276F.1_g111370 Hydrangea macrophylla HOM05D005261 ORTHO05D006180 8.5e-90 334.7 204 79.4
Lj3C845T19 Lonicera japonica HOM05D005261 ORTHO05D006180 1.4e-89 334.0 213 77.0
SHI35611 Sapria himalayana HOM05D005261 ORTHO05D006180 2.7e-88 329.7 308 57.5
ECA247G1584 Erigeron canadensis HOM05D000230 ORTHO05D006180 1.4e-84 317.4 254 63.4
CBR_g15981 Chara braunii HOM05D005261 ORTHO05D006180 2.0e-78 297.0 339 48.1
COL.COLO4_16503 Corchorus olitorius HOM05D005261 ORTHO05D006180 2.1e-64 250.4 194 69.6
SHI34852 Sapria himalayana HOM05D005261 ORTHO05D006180 1.2e-59 234.6 318 45.3
SHI20620 Sapria himalayana HOM05D005261 ORTHO05D006180 3.8e-58 229.6 275 48.7
SHI34844 Sapria himalayana HOM05D005261 ORTHO05D006180 5.5e-57 225.7 312 44.9
PRCOL_00005291 Prasinoderma coloniale HOM05D005261 ORTHO05D006180 3.7e-53 213.0 339 41.3
SHI43763 Sapria himalayana HOM05D005261 ORTHO05D006180 3.5e-51 206.5 142 69.0
SHI46120 Sapria himalayana HOM05D005261 ORTHO05D006180 1.5e-49 201.1 142 68.3
SHI53472 Sapria himalayana HOM05D005261 ORTHO05D006180 1.7e-45 187.6 181 54.7
SHI32317 Sapria himalayana HOM05D005261 ORTHO05D006180 6.0e-43 179.1 307 37.8
Oeu017307.1 Olea europaea HOM05D005261 ORTHO05D006180 1.0e-42 178.3 134 70.9
Rhsim10G0118000 Rhododendron simsii HOM05D005261 ORTHO05D006180 3.0e-42 176.8 184 55.4
SHI52923 Sapria himalayana HOM05D005261 ORTHO05D006180 5.0e-42 176.0 181 52.5
SHI54958 Sapria himalayana HOM05D005261 ORTHO05D006180 3.1e-39 166.8 114 71.9
Cre04.g224002 Chlamydomonas reinhardtii HOM05D005261 ORTHO05D006180 5.8e-38 162.5 167 49.7
SHI49977 Sapria himalayana HOM05D005261 ORTHO05D006180 8.6e-34 148.7 171 49.7
MCO14G461 Micromonas commoda HOM05D005261 ORTHO05D006180 1.6e-32 144.4 329 32.8
SHI53189 Sapria himalayana HOM05D005261 ORTHO05D006180 1.4e-31 141.4 181 48.6
PGSC0003DMG401027564 Solanum tuberosum HOM05D001663 ORTHO05D003186 2.6e-30 137.1 80 85.0
SHI49044 Sapria himalayana HOM05D005261 ORTHO05D006180 9.2e-28 128.6 127 54.3
Rhsim13G0124000 Rhododendron simsii HOM05D005261 ORTHO05D006180 4.7e-24 116.3 188 42.0
Lj3A845G93 Lonicera japonica HOM05D005261 ORTHO05D006180 8.4e-21 105.5 55 87.3
SHI51067 Sapria himalayana HOM05D005261 ORTHO05D006180 4.2e-20 103.2 138 42.0
SHI41608 Sapria himalayana HOM05D005261 ORTHO05D006180 3.5e-19 100.1 142 43.7
SHI52089 Sapria himalayana HOM05D005261 ORTHO05D006180 7.8e-19 99.0 139 41.0
SHI51747 Sapria himalayana HOM05D005261 ORTHO05D006180 1.1e-17 95.1 139 39.6
SHI50342 Sapria himalayana HOM05D005261 ORTHO05D006180 6.6e-10 69.3 52 71.2
ClCG11G007990 Citrullus lanatus HOM05D005261 ORTHO05D006180 1.8e-07 61.2 32 75.0


User provided reference genes

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