Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002561g0040 Nicotiana tabacum HOM05D007378 ORTHO05D007577 0.0e+00 1172.9 606 100.0
Solyc04g081420.4 Solanum lycopersicum HOM05D007378 ORTHO05D007577 1.7e-215 753.1 617 69.0
CAN.G311.27 Capsicum annuum HOM05D007378 ORTHO05D007577 1.2e-213 746.9 615 68.3
PGSC0003DMG400009935 Solanum tuberosum HOM05D007378 ORTHO05D007577 3.0e-212 742.3 613 68.8
Sopen04g035030 Solanum pennellii HOM05D007378 ORTHO05D007577 5.1e-212 741.5 619 68.5
Peaxi162Scf00438g00718 Petunia axillaris HOM05D007378 ORTHO05D007577 1.8e-201 706.4 625 65.1
Dinv31841 Davidia involucrata HOM05D007378 ORTHO05D007577 1.1e-86 325.1 689 36.9
Dinv39514 Davidia involucrata HOM05D007378 ORTHO05D007577 4.1e-84 316.6 703 37.1
QL02p011519 Quercus lobata HOM05D007378 ORTHO05D007577 1.1e-68 265.4 704 33.9
Cc10_g01700 Coffea canephora HOM05D007378 ORTHO05D007577 1.2e-67 261.9 689 34.0
Hma1.2p1_0023F.1_g015450 Hydrangea macrophylla HOM05D007378 ORTHO05D007577 2.0e-67 261.2 683 33.8
CSS0021578 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 1.5e-65 255.0 731 33.2
Thecc.08G043900 Theobroma cacao HOM05D007378 ORTHO05D007577 3.7e-61 240.4 690 33.9
Prupe.1G365800 Prunus persica HOM05D007378 ORTHO05D007577 4.6e-59 233.4 705 32.1
Duzib093G0923 Durio zibethinus HOM05D007378 ORTHO05D007577 1.9e-57 228.0 698 32.8
Haze_22630 Corylus avellana HOM05D007378 ORTHO05D007577 5.6e-57 226.5 688 31.5
MD08G1013300 Malus domestica HOM05D007378 ORTHO05D007577 9.5e-57 225.7 703 33.0
MD15G1012700 Malus domestica HOM05D007378 ORTHO05D007577 3.6e-56 223.8 698 31.5
Cfa013945 Carpinus fangiana HOM05D007378 ORTHO05D007577 1.8e-55 221.5 679 31.2
Ciclev10000382m.g Citrus clementina HOM05D007378 ORTHO05D007577 3.1e-55 220.7 707 31.8
MSTRG.25246 Avicennia marina HOM05D007378 ORTHO05D007577 3.7e-53 213.8 644 32.0
COL.COLO4_26152 Corchorus olitorius HOM05D007378 ORTHO05D007577 1.1e-52 212.2 680 31.6
Actinidia15419 Actinidia chinensis HOM05D007378 ORTHO05D007577 3.2e-52 210.7 653 31.7
GSVIVG01009901001 Vitis vinifera HOM05D007378 ORTHO05D007577 3.2e-52 210.7 530 34.9
Duzib116G0067 Durio zibethinus HOM05D007378 ORTHO05D007577 4.1e-52 210.3 609 33.7
CiPaw.07G150400 Carya illinoinensis HOM05D007378 ORTHO05D007577 1.6e-51 208.4 607 32.9
Potri.005G238800 Populus trichocarpa HOM05D007378 ORTHO05D007577 4.6e-51 206.8 670 33.0
Oeu020868.1 Olea europaea HOM05D007378 ORTHO05D007577 2.8e-48 197.6 582 32.3
Manes.05G147800 Manihot esculenta HOM05D007378 ORTHO05D007577 3.1e-47 194.1 664 30.3
Manes.18G013740 Manihot esculenta HOM05D007378 ORTHO05D007577 3.1e-47 194.1 651 31.6
DCAR_013867 Daucus carota HOM05D007378 ORTHO05D007577 4.0e-47 193.7 622 30.4
Actinidia16984 Actinidia chinensis HOM05D007378 ORTHO05D007577 6.8e-47 193.0 581 32.9
TWI12G0183 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 2.2e-45 188.0 735 29.8
Atru.chr13.296 Acer truncatum HOM05D007378 ORTHO05D007577 1.9e-44 184.9 481 32.8
Cpa.g.sc26.38 Carica papaya HOM05D007378 ORTHO05D007577 3.5e-43 180.6 671 28.8
vmacro21724 Vaccinium macrocarpon HOM05D007378 ORTHO05D007577 7.8e-43 179.5 516 32.2
TAR381G0696 Trochodendron aralioides HOM05D007378 ORTHO05D007577 3.0e-42 177.6 663 28.7
Potri.002G022800 Populus trichocarpa HOM05D007378 ORTHO05D007577 3.9e-42 177.2 679 31.1
Sabra02G0018600 Salix brachista HOM05D007378 ORTHO05D007577 1.1e-41 175.6 675 30.5
Sabra05G0184500 Salix brachista HOM05D007378 ORTHO05D007577 3.6e-40 170.6 676 29.4
Rhsim07G0247100 Rhododendron simsii HOM05D007378 ORTHO05D007577 8.1e-40 169.5 686 28.1
SalBow7G4715 Salvia bowleyana HOM05D007378 ORTHO05D007577 1.8e-39 168.3 505 31.3
Migut.C00828 Erythranthe guttata HOM05D007378 ORTHO05D007577 6.8e-39 166.4 606 30.0
FvH4_2g38520 Fragaria vesca HOM05D007378 ORTHO05D007577 8.9e-39 166.0 693 28.4
Glyma.04G024500 Glycine max HOM05D007378 ORTHO05D007577 7.6e-38 162.9 664 30.3
RcHm_v2.0_Chr6g0302801 Rosa chinensis HOM05D007378 ORTHO05D007577 7.6e-38 162.9 726 29.1
TWI56G0017 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 2.2e-37 161.4 606 31.0
CSS0010969 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 6.4e-37 159.8 370 36.2
FAN27G0575 Fragaria x ananassa HOM05D007378 ORTHO05D007577 7.1e-36 156.4 725 27.9
Hund05208 Selenicereus undatus HOM05D007378 ORTHO05D007577 1.2e-35 155.6 689 28.4
Eucgr.F00598 Eucalyptus grandis HOM05D007378 ORTHO05D007577 4.6e-35 153.7 671 30.6
FAN20G0665 Fragaria x ananassa HOM05D007378 ORTHO05D007577 6.6e-34 149.8 680 27.8
Glyma.06G024600 Glycine max HOM05D007378 ORTHO05D007577 1.5e-33 148.7 673 28.5
Phvul.009G016700 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 1.6e-32 145.2 534 30.5
VMungo0647G1459 Vigna mungo HOM05D007378 ORTHO05D007577 2.1e-32 144.8 623 29.7
FAN15G3724 Fragaria x ananassa HOM05D007378 ORTHO05D007577 3.6e-32 144.1 705 27.2
MBI05_g30742_MAGBIO Magnolia biondii HOM05D007378 ORTHO05D007577 4.7e-32 143.7 672 29.9
Lalb_Chr11g0061931 Lupinus albus HOM05D007378 ORTHO05D007577 6.2e-32 143.3 636 29.1
SGA_v2.0_scaffold92G28233 Striga asiatica HOM05D007378 ORTHO05D007577 1.8e-31 141.7 576 28.1
Lj1g0027004 Lotus japonicus HOM05D007378 ORTHO05D007577 2.4e-31 141.4 663 29.1
CANSAT25G3202 Cannabis sativa HOM05D007378 ORTHO05D007577 6.9e-31 139.8 666 29.3
VMungo1309G2950 Vigna mungo HOM05D007378 ORTHO05D007577 8.9e-31 139.4 616 28.9
TWI36G1616 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 1.5e-30 138.7 648 29.0
CiPaw.08G066200 Carya illinoinensis HOM05D007378 ORTHO05D007577 2.6e-30 137.9 741 25.2
Phvul.001G006800 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 9.9e-30 136.0 601 29.6
Ca_15483_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 1.3e-29 135.6 547 30.0
PGR031G0679 Punica granatum HOM05D007378 ORTHO05D007577 1.3e-29 135.6 624 27.7
Psat5g013200 Pisum sativum HOM05D007378 ORTHO05D007577 1.7e-29 135.2 672 27.2
Lj5g0002996 Lotus japonicus HOM05D007378 ORTHO05D007577 2.2e-29 134.8 590 29.3
Sc15g0005020 Simmondsia chinensis HOM05D007378 ORTHO05D007577 6.4e-29 133.3 663 27.8
Aqoxy5G01785 Aquilegia oxysepala HOM05D007378 ORTHO05D007577 1.4e-28 132.1 710 25.1
Glyma.14G219000 Glycine max HOM05D007378 ORTHO05D007577 1.4e-28 132.1 539 28.9
arahy.Tifrunner.gnm1.ann1.WP2VUZ Arachis hypogaea HOM05D007378 ORTHO05D007577 2.4e-28 131.3 624 28.7
Duzib041G0240 Durio zibethinus HOM05D007378 ORTHO05D007577 3.2e-28 131.0 204 46.1
TPR.G34540 Trifolium pratense HOM05D007378 ORTHO05D007577 9.3e-28 129.4 650 28.0
arahy.Tifrunner.gnm1.ann1.KUKA7T Arachis hypogaea HOM05D007378 ORTHO05D007577 3.5e-27 127.5 620 29.0
Nn5g30152 Nelumbo nucifera HOM05D007378 ORTHO05D007577 4.6e-27 127.1 557 28.2
Ca_13427_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 7.8e-27 126.3 600 29.2
Medtr1g025180 Medicago truncatula HOM05D007378 ORTHO05D007577 5.1e-26 123.6 627 28.7
Medtr3g113840 Medicago truncatula HOM05D007378 ORTHO05D007577 5.1e-26 123.6 656 26.8
TPR.G26373 Trifolium pratense HOM05D007378 ORTHO05D007577 1.5e-25 122.1 629 27.3
Glyma.17G258000 Glycine max HOM05D007378 ORTHO05D007577 5.6e-25 120.2 620 27.9
CSS0029124 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 1.3e-24 119.0 220 39.5
Duzib041G0283 Durio zibethinus HOM05D007378 ORTHO05D007577 1.6e-24 118.6 304 31.2
CSS0024961 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 2.8e-24 117.9 202 41.1
TAR625G0788 Trochodendron aralioides HOM05D000628 ORTHO05D001121 2.4e-23 114.8 124 52.4
AUR62033831 Chenopodium quinoa HOM05D007378 ORTHO05D007577 2.6e-22 111.3 622 26.8
AT1G75730 Arabidopsis thaliana HOM05D010473 ORTHO05D007577 3.2e-20 104.4 592 26.5
Carub.0002s2258 Capsella rubella HOM05D010473 ORTHO05D007577 6.0e-19 100.1 504 26.4
AL2G35720 Arabidopsis lyrata HOM05D010473 ORTHO05D007577 7.9e-19 99.8 507 26.8
Aa31LG4G5960 Aethionema arabicum HOM05D010473 ORTHO05D007577 1.0e-18 99.4 595 27.6
vmacro04350 Vaccinium macrocarpon HOM05D007378 ORTHO05D007577 3.0e-18 97.8 221 34.8
CARHR069140 Cardamine hirsuta HOM05D010473 ORTHO05D007577 5.1e-18 97.1 327 28.7
BcaC03g15618 Brassica carinata HOM05D010473 ORTHO05D007577 6.7e-18 96.7 478 26.6
Lalb_Chr08g0246161 Lupinus albus HOM05D007378 ORTHO05D007577 1.9e-17 95.1 612 26.0
Thhalv10018322m.g Eutrema salsugineum HOM05D010473 ORTHO05D007577 4.3e-17 94.0 608 27.1
Sp5g30850 Schrenkiella parvula HOM05D010473 ORTHO05D007577 4.3e-17 94.0 598 25.1
C02p33740 Brassica napus HOM05D010473 ORTHO05D007577 9.6e-17 92.8 474 26.2
THA.LOC104814031 Tarenaya hassleriana HOM05D010473 ORTHO05D007577 1.6e-16 92.0 579 26.9
BcaB05g24937 Brassica carinata HOM05D010473 ORTHO05D007577 2.8e-16 91.3 305 28.5
BolC2t09331H Brassica oleracea HOM05D010473 ORTHO05D007577 3.6e-16 90.9 477 25.8
PSO170G0005 Papaver somniferum HOM05D007378 ORTHO05D007577 1.8e-15 88.6 148 39.9
BraA02t07054Z Brassica rapa HOM05D010473 ORTHO05D007577 3.1e-15 87.8 313 30.7
PSO700G0360 Papaver somniferum HOM05D007378 ORTHO05D007577 3.1e-15 87.8 187 34.8
A02p20200 Brassica napus HOM05D010473 ORTHO05D007577 5.3e-15 87.0 460 27.0
AUR62035752 Chenopodium quinoa HOM05D007378 ORTHO05D007577 3.4e-14 84.3 618 25.9
Psat6g003040 Pisum sativum HOM05D007378 ORTHO05D007577 4.9e-13 80.5 548 26.8
A07p41260 Brassica napus HOM05D010473 ORTHO05D007577 1.8e-10 72.0 320 29.1
SGA_v2.0_scaffold11G05915 Striga asiatica HOM05D007378 ORTHO05D007577 3.9e-10 70.9 504 25.2
C06p49680 Brassica napus HOM05D010473 ORTHO05D007577 5.1e-10 70.5 318 29.2
BcaC08g47058 Brassica carinata HOM05D010473 ORTHO05D007577 1.9e-09 68.6 196 31.6
BraA07t31661Z Brassica rapa HOM05D010473 ORTHO05D007577 5.6e-09 67.0 329 28.6
ATR0152G004 Amborella trichopoda HOM05D007378 ORTHO05D007577 4.8e-08 63.9 115 38.3
Lsat_1_v5_gn_2_9361 Lactuca sativa HOM05D037282 ORTHO05D035104 4.8e-08 63.9 137 35.0
BolC6t40007H Brassica oleracea HOM05D010473 ORTHO05D007577 1.4e-07 62.4 336 28.9
Lj4A25T50 Lonicera japonica HOM05D007378 ORTHO05D007577 1.4e-07 62.4 157 33.8
CSS0034917 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 1.8e-07 62.0 51 54.9
BcaC03g15614 Brassica carinata HOM05D010473 ORTHO05D007577 5.3e-07 60.5 274 24.5
ECA238G3204 Erigeron canadensis HOM05D037282 ORTHO05D035104 9.0e-07 59.7 145 33.8


User provided reference genes

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