Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002558g0140 Nicotiana tabacum HOM05D002965 ORTHO05D010183 2.3e-51 205.3 104 100.0
CAN.G1576.4 Capsicum annuum HOM05D002965 ORTHO05D010183 3.2e-21 105.1 92 66.3
RhsimMtG0001000 Rhododendron simsii HOM05D000743 ORTHO05D000580 5.5e-21 104.4 112 58.0
ECA039G0012 Erigeron canadensis HOM05D002965 ORTHO05D010183 9.3e-21 103.6 54 96.3
Lsat_1_v5_gn_4_66041 Lactuca sativa HOM05D002965 ORTHO05D010183 9.3e-21 103.6 64 84.4
HanXRQChr08g0212281 Helianthus annuus HOM05D002965 ORTHO05D010183 1.6e-20 102.8 64 82.8
HanXRQMTg0579441 Helianthus annuus HOM05D002965 ORTHO05D010183 1.6e-20 102.8 64 82.8
CAN.G309.4 Capsicum annuum HOM05D002965 ORTHO05D010183 2.1e-20 102.4 78 69.2
Hma1.2p1_0713F.1_g207720 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 2.1e-20 102.4 62 83.9
Hma1.2p1_1338F.1_g276549 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 2.1e-20 102.4 62 83.9
Hma1.2p1_1338F.1_g276560 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 2.1e-20 102.4 62 83.9
CAN.G1061.19 Capsicum annuum HOM05D002965 ORTHO05D010183 2.7e-20 102.1 60 86.7
CAN.G285.11 Capsicum annuum HOM05D002965 ORTHO05D010183 2.7e-20 102.1 60 86.7
Cpa.g.sc263.23 Carica papaya HOM05D002965 ORTHO05D010183 2.7e-20 102.1 60 86.7
Actinidia10888 Actinidia chinensis HOM05D002965 ORTHO05D010183 3.5e-20 101.7 60 86.7
CAN.G1439.3 Capsicum annuum HOM05D002965 ORTHO05D010183 3.5e-20 101.7 92 64.1
Dinv06704 Davidia involucrata HOM05D002965 ORTHO05D010183 3.5e-20 101.7 60 86.7
Solyc00g118690.1 Solanum lycopersicum HOM05D002965 ORTHO05D010183 3.5e-20 101.7 56 91.1
Sopen05g012840 Solanum pennellii HOM05D002965 ORTHO05D010183 3.5e-20 101.7 56 91.1
Ah.10g028480 Amaranthus hybridus HOM05D002965 ORTHO05D010183 4.6e-20 101.3 58 91.4
Aqoxy1G02687 Aquilegia oxysepala HOM05D002965 ORTHO05D010183 4.6e-20 101.3 65 80.0
Peaxi162Scf00197g00037 Petunia axillaris HOM05D002965 ORTHO05D010183 4.6e-20 101.3 54 94.4
QL05p039661 Quercus lobata HOM05D002965 ORTHO05D010183 7.9e-20 100.5 60 85.0
BNapus_Darmor_BZH_scaffold_234p00020 Brassica napus HOM05D002965 ORTHO05D010183 1.3e-19 99.8 60 85.0
BolSC28t60382H Brassica oleracea HOM05D002965 ORTHO05D010183 1.3e-19 99.8 60 85.0
BolSC28t60415H Brassica oleracea HOM05D002965 ORTHO05D010183 1.3e-19 99.8 60 85.0
BraSC177t45752Z Brassica rapa HOM05D002965 ORTHO05D010183 1.3e-19 99.8 60 85.0
CsaV3_UNG209220 Cucumis sativus L. HOM05D002965 ORTHO05D010183 1.3e-19 99.8 56 89.3
LjContig00315g0010995 Lotus japonicus HOM05D002965 ORTHO05D010183 1.3e-19 99.8 56 89.3
Medtr0082s0280 Medicago truncatula HOM05D002965 ORTHO05D010183 1.3e-19 99.8 60 85.0
Psat3g040160 Pisum sativum HOM05D004537 ORTHO05D005492 1.3e-19 99.8 60 85.0
Potri.007G061981 Populus trichocarpa HOM05D002965 ORTHO05D010183 1.3e-19 99.8 56 89.3
RcHm_v2.0_MTg0499241 Rosa chinensis HOM05D002965 ORTHO05D010183 1.3e-19 99.8 60 85.0
Sp3g25630 Schrenkiella parvula HOM05D002965 ORTHO05D010183 1.3e-19 99.8 60 85.0
TPR.G40481 Trifolium pratense HOM05D002965 ORTHO05D010183 1.3e-19 99.8 60 85.0
Cfa022987 Carpinus fangiana HOM05D002965 ORTHO05D010183 1.8e-19 99.4 53 94.3
SabraMtG0001800 Salix brachista HOM05D001325 ORTHO05D001540 3.0e-19 98.6 55 89.1
SalBow1G8555 Salvia bowleyana HOM05D002965 ORTHO05D010183 3.0e-19 98.6 62 82.3
BraSC48t46251Z Brassica rapa HOM05D002965 ORTHO05D010183 6.7e-19 97.4 55 89.1
Ca_28103_v3 Cicer arietinum L. HOM05D003430 ORTHO05D004809 6.7e-19 97.4 55 89.1
VMungo0647G1384 Vigna mungo HOM05D002965 ORTHO05D010183 6.7e-19 97.4 58 86.2
arahy.Tifrunner.gnm1.ann1.CG3D8R Arachis hypogaea HOM05D002965 ORTHO05D010183 8.7e-19 97.1 60 83.3
arahy.Tifrunner.gnm1.ann1.EP7E6M Arachis hypogaea HOM05D002965 ORTHO05D010183 8.7e-19 97.1 60 83.3
arahy.Tifrunner.gnm1.ann1.I1QAK6 Arachis hypogaea HOM05D002965 ORTHO05D010183 8.7e-19 97.1 60 83.3
Sed0028066 Sechium edule HOM05D002965 ORTHO05D010183 8.7e-19 97.1 56 87.5
Medtr5g040110 Medicago truncatula HOM05D002965 ORTHO05D010183 1.1e-18 96.7 60 83.3
unitig_87.g27935 Utricularia gibba HOM05D002965 ORTHO05D010183 1.5e-18 96.3 56 85.7
Nitab4.5_0005613g0040 Nicotiana tabacum HOM05D002965 ORTHO05D010183 4.3e-18 94.7 56 85.7
SHI48910 Sapria himalayana HOM05D002965 ORTHO05D010183 5.7e-18 94.4 55 85.5
Nitab4.5_0000172g1470 Nicotiana tabacum HOM05D002965 ORTHO05D010183 1.3e-17 93.2 61 77.0
MELO3C031425.2 Cucumis melo HOM05D002965 ORTHO05D010183 4.8e-17 91.3 54 83.3
Hma1.2p1_0204F.1_g086870 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 1.2e-15 86.7 55 80.0
Nitab4.5_0005831g0070 Nicotiana tabacum HOM05D002965 ORTHO05D010183 1.2e-15 86.7 60 78.3
SGA_v2.0_scaffold479G52282 Striga asiatica HOM05D002965 ORTHO05D010183 5.0e-14 81.3 43 93.0
CAN.G390.19 Capsicum annuum HOM05D002965 ORTHO05D010183 2.5e-10 68.9 45 77.8
CDE02G3239 Ceratophyllum demersum HOM05D002965 ORTHO05D010183 3.7e-09 65.1 46 69.6
Nitab4.5_0001796g0410 Nicotiana tabacum HOM05D002965 ORTHO05D010183 3.7e-09 65.1 61 59.0
Lalb_Chr00c21g0405781 Lupinus albus HOM05D002965 ORTHO05D010183 1.1e-08 63.5 33 90.9
CSS0026545 Camellia sinensis var. sinensis HOM05D002965 ORTHO05D010183 1.4e-08 63.2 31 96.8
CDE02G2102 Ceratophyllum demersum HOM05D002965 ORTHO05D010183 1.8e-08 62.8 41 75.6
QL02p008127 Quercus lobata HOM05D003783 ORTHO05D004568 2.4e-08 62.4 37 83.8
SHI41349 Sapria himalayana HOM05D037518 ORTHO05D010183 4.1e-08 61.6 36 83.3
Dinv34203 Davidia involucrata HOM05D002965 ORTHO05D010183 1.2e-07 60.1 32 87.5
BolC7t41501H Brassica oleracea HOM05D002965 ORTHO05D010183 6.5e-06 54.3 30 80.0


User provided reference genes

Program Settings