Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002558g0110 Nicotiana tabacum HOM05D002965 ORTHO05D011068 1.3e-105 386.3 192 100.0
Cpa.g.sc263.24 Carica papaya HOM05D002965 ORTHO05D011068 6.5e-68 261.2 189 75.1
Nitab4.5_0000172g1470 Nicotiana tabacum HOM05D002965 ORTHO05D010183 3.3e-56 222.2 176 69.3
Nitab4.5_0001761g0080 Nicotiana tabacum HOM05D002965 ORTHO05D010183 1.8e-54 216.5 181 66.9
Nitab4.5_0002418g0070 Nicotiana tabacum HOM05D002965 ORTHO05D010183 1.5e-45 186.8 112 81.2
Peaxi162Scf00863g00003 Petunia axillaris HOM05D002965 ORTHO05D011068 8.0e-42 174.5 141 64.5
Nitab4.5_0005831g0070 Nicotiana tabacum HOM05D002965 ORTHO05D010183 1.5e-40 170.2 177 57.1
SabraMtG0001800 Salix brachista HOM05D001325 ORTHO05D001540 4.8e-39 165.2 95 84.2
Ca_28560_v3 Cicer arietinum L. HOM05D002965 ORTHO05D010536 4.5e-37 158.7 89 85.4
Nitab4.5_0005613g0030 Nicotiana tabacum HOM05D002965 ORTHO05D011068 2.2e-36 156.4 169 56.8
Sopen05g012840 Solanum pennellii HOM05D002965 ORTHO05D010183 3.8e-36 155.6 195 51.3
Nitab4.5_0002653g0030 Nicotiana tabacum HOM05D002965 ORTHO05D011068 5.0e-36 155.2 192 50.0
Nitab4.5_0001796g0200 Nicotiana tabacum HOM05D002965 ORTHO05D011068 1.5e-35 153.7 81 86.4
SGA_v2.0_scaffold479G52282 Striga asiatica HOM05D002965 ORTHO05D010183 2.3e-33 146.4 87 81.6
Sopen06g007640 Solanum pennellii HOM05D002965 ORTHO05D012151 2.0e-32 143.3 82 85.4
unitig_87.g27935 Utricularia gibba HOM05D002965 ORTHO05D010183 4.8e-31 138.7 85 77.6
Cfa022987 Carpinus fangiana HOM05D002965 ORTHO05D010183 3.5e-29 132.5 210 46.7
Nitab4.5_0004376g0100 Nicotiana tabacum HOM05D000445 ORTHO05D000314 5.9e-29 131.7 74 89.2
ECA246G1890 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.8e-28 129.0 81 76.5
Haze_01424 Corylus avellana HOM05D022652 ORTHO05D011068 9.1e-22 107.8 173 43.4
Haze_01425 Corylus avellana HOM05D022652 ORTHO05D011068 9.1e-22 107.8 173 43.4
Nitab4.5_0000580g0190 Nicotiana tabacum HOM05D002965 ORTHO05D011068 2.0e-21 106.7 57 87.7
Nitab4.5_0001763g0110 Nicotiana tabacum HOM05D002965 ORTHO05D011068 1.7e-20 103.6 158 43.0
Peaxi162Scf02014g00001 Petunia axillaris HOM05D016050 ORTHO05D011068 9.5e-19 97.8 69 71.0
CSS0045201 Camellia sinensis var. sinensis HOM05D002965 ORTHO05D011068 2.1e-18 96.7 79 69.6
Aa31csc822G20 Aethionema arabicum HOM05D002965 ORTHO05D011068 2.0e-16 90.1 59 74.6
SHI27034 Sapria himalayana HOM05D023343 ORTHO05D011068 3.4e-16 89.4 66 69.7
Dinv06704 Davidia involucrata HOM05D002965 ORTHO05D010183 4.9e-15 85.5 45 91.1
CAN.G1439.3 Capsicum annuum HOM05D002965 ORTHO05D010183 1.8e-14 83.6 67 59.7
CsaV3_UNG209190 Cucumis sativus L. HOM05D016050 ORTHO05D011068 1.8e-14 83.6 48 83.3
ClCG01G010190 Citrullus lanatus HOM05D042035 ORTHO05D016641 7.0e-14 81.6 46 78.3
SHI25680 Sapria himalayana HOM05D022652 ORTHO05D011068 7.0e-14 81.6 45 80.0
Nitab4.5_0000886g0150 Nicotiana tabacum HOM05D002965 ORTHO05D011068 2.9e-12 76.3 164 36.0
BolC1t03459H Brassica oleracea HOM05D002965 ORTHO05D011068 5.0e-12 75.5 66 63.6
Sed0028066 Sechium edule HOM05D002965 ORTHO05D010183 1.9e-11 73.6 165 36.4
RhsimMtG0001000 Rhododendron simsii HOM05D000743 ORTHO05D000580 2.5e-11 73.2 43 83.7
Psat3g040160 Pisum sativum HOM05D004537 ORTHO05D005492 1.0e-09 67.8 139 39.6
Nitab4.5_0000402g0050 Nicotiana tabacum HOM05D000191 ORTHO05D000122 1.4e-09 67.4 43 79.1
Solyc10g018950.1 Solanum lycopersicum HOM05D002965 ORTHO05D010183 6.8e-09 65.1 43 69.8
SHI27232 Sapria himalayana HOM05D022652 ORTHO05D011068 8.9e-09 64.7 52 53.8
PGSC0003DMG400017419 Solanum tuberosum HOM05D002965 ORTHO05D011068 1.2e-08 64.3 76 55.3
Nitab4.5_0000215g0080 Nicotiana tabacum HOM05D002965 ORTHO05D011068 4.4e-08 62.4 34 76.5
Nitab4.5_0002072g0110 Nicotiana tabacum HOM05D002965 ORTHO05D011068 4.4e-08 62.4 34 82.4
Eucgr.C02171 Eucalyptus grandis HOM05D002965 ORTHO05D011068 3.7e-07 59.3 50 66.0
Nitab4.5_0000859g0140 Nicotiana tabacum HOM05D002965 ORTHO05D011068 1.9e-06 57.0 54 61.1


User provided reference genes

Program Settings