Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002557g0020 Nicotiana tabacum HOM05D002160 ORTHO05D002012 6.5e-24 113.6 75 100.0
Nitab4.5_0000317g0020 Nicotiana tabacum HOM05D002160 ORTHO05D002012 2.4e-18 95.1 99 62.6
PGSC0003DMG400030321 Solanum tuberosum HOM05D002160 ORTHO05D002012 7.0e-18 93.6 75 85.3
Sopen06g032540 Solanum pennellii HOM05D002160 ORTHO05D002012 4.5e-17 90.9 78 80.8
CAN.G405.1 Capsicum annuum HOM05D002160 ORTHO05D002012 7.7e-17 90.1 76 73.7
Solyc06g076140.4 Solanum lycopersicum HOM05D002160 ORTHO05D002012 7.7e-17 90.1 75 85.3
Peaxi162Scf00774g00011 Petunia axillaris HOM05D002160 ORTHO05D002012 2.9e-16 88.2 78 82.1
Peaxi162Scf00946g00028 Petunia axillaris HOM05D002160 ORTHO05D002012 2.9e-16 88.2 78 73.1
CAN.G394.56 Capsicum annuum HOM05D002160 ORTHO05D002012 5.0e-16 87.4 78 69.2
Dinv17000 Davidia involucrata HOM05D002160 ORTHO05D002012 8.5e-16 86.7 78 71.8
Dinv42949 Davidia involucrata HOM05D002160 ORTHO05D002012 8.5e-16 86.7 78 71.8
Dinv43151 Davidia involucrata HOM05D002160 ORTHO05D002012 8.5e-16 86.7 78 71.8
Solyc04g058150.3 Solanum lycopersicum HOM05D002160 ORTHO05D002012 3.2e-15 84.7 75 82.7
Sopen04g026050 Solanum pennellii HOM05D002160 ORTHO05D002012 3.2e-15 84.7 75 82.7
Dinv12424 Davidia involucrata HOM05D002160 ORTHO05D002012 4.2e-15 84.3 78 70.5
Nitab4.5_0022803g0010 Nicotiana tabacum HOM05D002160 ORTHO05D002012 3.6e-14 81.3 75 73.3
Solyc04g058100.3 Solanum lycopersicum HOM05D002160 ORTHO05D002012 6.1e-14 80.5 75 74.7
Sopen04g025910 Solanum pennellii HOM05D002160 ORTHO05D002012 1.4e-13 79.3 75 73.3
Nitab4.5_0003635g0040 Nicotiana tabacum HOM05D002160 ORTHO05D002012 2.0e-12 75.5 66 60.6
Solyc06g005465.1 Solanum lycopersicum HOM05D002160 ORTHO05D002012 4.4e-12 74.3 78 67.9
CSS0035762 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 9.7e-12 73.2 79 64.6
Cc01_g12850 Coffea canephora HOM05D002160 ORTHO05D002012 9.7e-12 73.2 77 58.4
Hma1.2p1_0035F.1_g022400 Hydrangea macrophylla HOM05D002160 ORTHO05D002012 9.7e-12 73.2 79 59.5
CSS0001348 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 2.2e-11 72.0 79 60.8
Hma1.2p1_0418F.1_g149080 Hydrangea macrophylla HOM05D002160 ORTHO05D002012 2.2e-11 72.0 79 59.5
MBI14_g20107_MAGBIO Magnolia biondii HOM05D002160 ORTHO05D002012 4.8e-11 70.9 78 60.3
Sopen06g001440 Solanum pennellii HOM05D002160 ORTHO05D002012 1.4e-10 69.3 78 65.4
TAR633G1907 Trochodendron aralioides HOM05D002160 ORTHO05D002012 1.4e-10 69.3 77 58.4
Potri.001G239650 Populus trichocarpa HOM05D002160 ORTHO05D002012 2.4e-10 68.6 77 62.3
Actinidia26465 Actinidia chinensis HOM05D002160 ORTHO05D002012 3.1e-10 68.2 77 59.7
HanXRQChr11g0350841 Helianthus annuus HOM05D002160 ORTHO05D002012 3.1e-10 68.2 78 57.7
Lsat_1_v5_gn_9_23460 Lactuca sativa HOM05D002160 ORTHO05D002012 3.1e-10 68.2 78 57.7
Rhsim04G0157100 Rhododendron simsii HOM05D002160 ORTHO05D002012 3.1e-10 68.2 74 62.2
QL07p048278 Quercus lobata HOM05D002160 ORTHO05D002012 4.1e-10 67.8 79 59.5
DCAR_005972 Daucus carota HOM05D002160 ORTHO05D002012 5.3e-10 67.4 60 73.3
ECA247G1660 Erigeron canadensis HOM05D002160 ORTHO05D002012 5.3e-10 67.4 78 57.7
Atru.chr3.3902 Acer truncatum HOM05D002160 ORTHO05D002012 9.1e-10 66.6 80 62.5
CiPaw.09G192500 Carya illinoinensis HOM05D002160 ORTHO05D002012 9.1e-10 66.6 77 59.7
Hma1.2p1_0035F.1_g022410 Hydrangea macrophylla HOM05D002160 ORTHO05D002012 9.1e-10 66.6 81 46.9
QL07p048273 Quercus lobata HOM05D002160 ORTHO05D002012 9.1e-10 66.6 79 64.6
Manes.02G133200 Manihot esculenta HOM05D002160 ORTHO05D002012 1.2e-09 66.2 77 71.4
Dinv37174 Davidia involucrata HOM05D002160 ORTHO05D002012 1.6e-09 65.9 80 58.8
Duzib106G1044 Durio zibethinus HOM05D002160 ORTHO05D002012 1.6e-09 65.9 77 57.1
CAN.G111.42 Capsicum annuum HOM05D002160 ORTHO05D002012 2.0e-09 65.5 78 61.5
ECA236G3652 Erigeron canadensis HOM05D002160 ORTHO05D002012 2.7e-09 65.1 79 55.7
PSO151G0128 Papaver somniferum HOM05D002160 ORTHO05D002012 3.5e-09 64.7 58 70.7
Cfa017382 Carpinus fangiana HOM05D002160 ORTHO05D002012 4.5e-09 64.3 77 64.9
Haze_20789 Corylus avellana HOM05D002160 ORTHO05D002012 4.5e-09 64.3 77 66.2
Manes.08G079262 Manihot esculenta HOM05D002160 ORTHO05D002012 4.5e-09 64.3 81 53.1
Oeu036147.1 Olea europaea HOM05D002160 ORTHO05D002012 4.5e-09 64.3 78 56.4
CiPaw.13G094600 Carya illinoinensis HOM05D002160 ORTHO05D002012 5.9e-09 63.9 80 58.8
Duzib093G1046 Durio zibethinus HOM05D002160 ORTHO05D002012 5.9e-09 63.9 77 57.1
PSO339G1859 Papaver somniferum HOM05D002160 ORTHO05D002012 5.9e-09 63.9 58 70.7
TWI79G1473 Tripterygium wilfordii HOM05D002160 ORTHO05D002012 5.9e-09 63.9 76 59.2
arahy.Tifrunner.gnm1.ann1.FFQQ4A Arachis hypogaea HOM05D002160 ORTHO05D002012 7.7e-09 63.5 81 60.5
Rhsim05G0192600 Rhododendron simsii HOM05D002160 ORTHO05D002012 7.7e-09 63.5 77 57.1
arahy.Tifrunner.gnm1.ann1.EU8JQM Arachis hypogaea HOM05D002160 ORTHO05D002012 1.0e-08 63.2 81 60.5
Manes.08G079200 Manihot esculenta HOM05D002160 ORTHO05D002012 1.0e-08 63.2 80 53.8
PSO339G1421 Papaver somniferum HOM05D002160 ORTHO05D002012 1.0e-08 63.2 58 70.7
TWI31G0178 Tripterygium wilfordii HOM05D002160 ORTHO05D002012 1.0e-08 63.2 77 58.4
Carub.0006s0117 Capsella rubella HOM05D002160 ORTHO05D002012 1.3e-08 62.8 76 56.6
Duzib128G1340 Durio zibethinus HOM05D002160 ORTHO05D002012 1.3e-08 62.8 77 54.5
Gohir.A04G082400 Gossypium hirsutum HOM05D002160 ORTHO05D002012 1.7e-08 62.4 77 57.1
Gohir.D04G121400 Gossypium hirsutum HOM05D002160 ORTHO05D002012 1.7e-08 62.4 77 57.1
MD12G1141500 Malus domestica HOM05D002160 ORTHO05D002012 1.7e-08 62.4 76 57.9
Actinidia05312 Actinidia chinensis HOM05D002160 ORTHO05D002012 2.2e-08 62.0 78 57.7
Lj3g0021630 Lotus japonicus HOM05D002160 ORTHO05D002012 2.2e-08 62.0 80 56.2
TWI31G0007 Tripterygium wilfordii HOM05D002160 ORTHO05D002012 2.2e-08 62.0 77 55.8
CiPaw.03G262000 Carya illinoinensis HOM05D002160 ORTHO05D002012 2.9e-08 61.6 77 42.9
CiPaw.10G145500 Carya illinoinensis HOM05D002160 ORTHO05D002012 2.9e-08 61.6 80 52.5
Gorai.012G103800 Gossypium raimondii HOM05D002160 ORTHO05D002012 2.9e-08 61.6 77 57.1
GSVIVG01034174001 Vitis vinifera HOM05D002160 ORTHO05D002012 2.9e-08 61.6 78 57.7
PGR004G1599 Punica granatum HOM05D002160 ORTHO05D002012 3.8e-08 61.2 78 57.7
VMungo1383G3367 Vigna mungo HOM05D002160 ORTHO05D002012 3.8e-08 61.2 78 56.4
AL6G11600 Arabidopsis lyrata HOM05D002160 ORTHO05D002012 5.0e-08 60.8 76 55.3
Prupe.6G255100 Prunus persica HOM05D002160 ORTHO05D002012 5.0e-08 60.8 76 55.3
CSS0038374 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 6.5e-08 60.5 77 54.5
Glyma.07G132000 Glycine max HOM05D002160 ORTHO05D002012 8.5e-08 60.1 80 58.8
Oeu053915.1 Olea europaea HOM05D022828 ORTHO05D002012 8.5e-08 60.1 53 71.7
CSS0020810 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 1.1e-07 59.7 61 67.2
Eucgr.J02054 Eucalyptus grandis HOM05D002160 ORTHO05D002012 1.1e-07 59.7 57 63.2
Manes.08G079000 Manihot esculenta HOM05D002160 ORTHO05D002012 1.1e-07 59.7 79 58.2
TAR369G0024 Trochodendron aralioides HOM05D002160 ORTHO05D002012 1.1e-07 59.7 80 57.5
CSS0041171 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 1.5e-07 59.3 61 67.2
MD04G1128900 Malus domestica HOM05D002160 ORTHO05D002012 1.5e-07 59.3 76 56.6
Phvul.008G101800 Phaseolus vulgaris HOM05D002160 ORTHO05D002012 1.5e-07 59.3 80 57.5
AT5G02380 Arabidopsis thaliana HOM05D002160 ORTHO05D002012 2.5e-07 58.5 76 53.9
Gohir.A01G222400 Gossypium hirsutum HOM05D002160 ORTHO05D002012 2.5e-07 58.5 77 53.2
Gohir.A11G326800 Gossypium hirsutum HOM05D002160 ORTHO05D002012 2.5e-07 58.5 75 62.7
Gorai.002G257700 Gossypium raimondii HOM05D002160 ORTHO05D002012 3.2e-07 58.2 77 53.2
COL.COLO4_14799 Corchorus olitorius HOM05D002160 ORTHO05D002012 4.2e-07 57.8 77 54.5
TPR.G23304 Trifolium pratense HOM05D002160 ORTHO05D002012 4.2e-07 57.8 77 55.8
CiPaw.14G068500 Carya illinoinensis HOM05D002160 ORTHO05D002012 5.5e-07 57.4 77 42.9
Hma1.2p1_0418F.1_g149100 Hydrangea macrophylla HOM05D002160 ORTHO05D002012 5.5e-07 57.4 79 55.7
CSS0042900 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 7.2e-07 57.0 77 53.2
CARHR211040 Cardamine hirsuta HOM05D002160 ORTHO05D002012 7.2e-07 57.0 77 55.8
Eucgr.A01262 Eucalyptus grandis HOM05D002160 ORTHO05D002012 7.2e-07 57.0 79 55.7
Potri.006G085200 Populus trichocarpa HOM05D002160 ORTHO05D002012 7.2e-07 57.0 78 53.8
TWI31G0095 Tripterygium wilfordii HOM05D002160 ORTHO05D002012 9.4e-07 56.6 71 43.7
HanXRQChr08g0235781 Helianthus annuus HOM05D002160 ORTHO05D002012 2.1e-06 55.5 61 63.9
Os01g0149800 Oryza sativa ssp. japonica HOM05D002160 ORTHO05D002012 2.1e-06 55.5 80 60.0
MBI14_g20106_MAGBIO Magnolia biondii HOM05D002160 ORTHO05D002012 2.7e-06 55.1 59 67.8
Thecc.05G039800 Theobroma cacao HOM05D002160 ORTHO05D002012 2.7e-06 55.1 81 55.6
CAN.G326.9 Capsicum annuum HOM05D002160 ORTHO05D002012 3.6e-06 54.7 81 53.1
Migut.D02103 Erythranthe guttata HOM05D022828 ORTHO05D002012 4.7e-06 54.3 53 66.0
Gorai.007G376000 Gossypium raimondii HOM05D002160 ORTHO05D002012 6.1e-06 53.9 75 46.7
TWI74G0912 Tripterygium wilfordii HOM05D002160 ORTHO05D002012 6.1e-06 53.9 76 55.3


User provided reference genes

Program Settings