Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002556g0080 Nicotiana tabacum HOM05D006513 ORTHO05D008150 2.5e-104 382.1 191 100.0
Nitab4.5_0007523g0020 Nicotiana tabacum HOM05D006513 ORTHO05D008150 9.5e-104 380.2 191 98.4
Peaxi162Scf00984g00021 Petunia axillaris HOM05D006513 ORTHO05D008150 5.4e-91 337.8 192 91.1
CAN.G377.11 Capsicum annuum HOM05D006513 ORTHO05D008150 1.5e-88 329.7 191 86.9
Solyc12g006660.2 Solanum lycopersicum HOM05D006513 ORTHO05D008150 1.5e-88 329.7 191 86.4
Sopen12g002610 Solanum pennellii HOM05D006513 ORTHO05D008150 1.9e-88 329.3 191 85.9
PGSC0003DMG401020668 Solanum tuberosum HOM05D006513 ORTHO05D008150 9.5e-88 327.0 191 87.4
Cc06_g08720 Coffea canephora HOM05D006513 ORTHO05D008150 7.6e-77 290.8 191 77.5
Dinv41526 Davidia involucrata HOM05D006513 ORTHO05D008150 1.9e-75 286.2 190 76.8
Hma1.2p1_0665F.1_g199090 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 2.7e-74 282.3 191 74.9
Lsat_1_v5_gn_7_45681 Lactuca sativa HOM05D006513 ORTHO05D008150 1.5e-72 276.6 188 74.5
HanXRQChr09g0242331 Helianthus annuus HOM05D006513 ORTHO05D008150 8.1e-71 270.8 192 71.9
ECA240G2511 Erigeron canadensis HOM05D006513 ORTHO05D008150 1.4e-70 270.0 192 71.9
CiPaw.03G242700 Carya illinoinensis HOM05D006513 ORTHO05D008150 4.0e-70 268.5 191 70.2
Eucgr.C04187 Eucalyptus grandis HOM05D006513 ORTHO05D008150 1.7e-68 263.1 191 67.0
PGR102G1904 Punica granatum HOM05D006513 ORTHO05D008150 6.4e-68 261.2 191 66.5
GSVIVG01015511001 Vitis vinifera HOM05D006513 ORTHO05D008150 1.4e-67 260.0 192 68.2
Manes.06G049600 Manihot esculenta HOM05D006513 ORTHO05D008150 9.3e-67 257.3 191 68.1
Potri.018G066700 Populus trichocarpa HOM05D006513 ORTHO05D008150 1.2e-66 256.9 191 66.5
Haze_25608 Corylus avellana HOM05D006513 ORTHO05D008150 1.6e-66 256.5 188 68.1
Lj4g0014130 Lotus japonicus HOM05D006513 ORTHO05D008150 3.5e-66 255.4 196 64.8
Sabra18G0060100 Salix brachista HOM05D006513 ORTHO05D008150 3.5e-66 255.4 191 65.4
PSO455G0031 Papaver somniferum HOM05D006513 ORTHO05D008150 7.9e-66 254.2 192 67.2
TPR.G10698 Trifolium pratense HOM05D006513 ORTHO05D008150 7.9e-66 254.2 196 64.3
PSO170G2269 Papaver somniferum HOM05D006513 ORTHO05D008150 3.0e-65 252.3 192 66.7
CSS0037158 Camellia sinensis var. sinensis HOM05D006513 ORTHO05D008150 5.1e-65 251.5 192 67.7
Ah.09g225970 Amaranthus hybridus HOM05D006513 ORTHO05D008150 1.5e-64 250.0 194 66.0
Manes.14G131100 Manihot esculenta HOM05D006513 ORTHO05D008150 1.9e-64 249.6 191 66.5
Thecc.09G123900 Theobroma cacao HOM05D006513 ORTHO05D008150 4.3e-64 248.4 191 64.4
Gohir.A07G035100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 5.6e-64 248.1 191 65.4
Sed0011750 Sechium edule HOM05D006513 ORTHO05D008150 5.6e-64 248.1 191 63.4
Actinidia26398 Actinidia chinensis HOM05D006513 ORTHO05D008150 1.3e-63 246.9 191 67.0
Psat4g039440 Pisum sativum HOM05D006513 ORTHO05D008150 1.3e-63 246.9 196 63.3
Gorai.001G041200 Gossypium raimondii HOM05D006513 ORTHO05D008150 1.6e-63 246.5 195 64.1
Sp6g24280 Schrenkiella parvula HOM05D006513 ORTHO05D008150 2.1e-63 246.1 191 63.4
CARHR192710 Cardamine hirsuta HOM05D006513 ORTHO05D008150 2.8e-63 245.7 191 63.4
Hma1.2p1_3730F.1_g337400 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 3.6e-63 245.4 193 66.3
Thhalv10014769m.g Eutrema salsugineum HOM05D006513 ORTHO05D008150 6.2e-63 244.6 191 63.9
Gohir.D07G039100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 6.2e-63 244.6 191 64.9
vmacro06122 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 8.1e-63 244.2 191 64.9
vmacro06182 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 8.1e-63 244.2 191 64.9
AL6G31670 Arabidopsis lyrata HOM05D006513 ORTHO05D008150 1.8e-62 243.0 191 63.4
Ciclev10009612m.g Citrus clementina HOM05D006513 ORTHO05D008150 1.8e-62 243.0 191 65.4
Carub.0006s1850 Capsella rubella HOM05D006513 ORTHO05D008150 2.4e-62 242.7 191 63.4
Duzib187G1241 Durio zibethinus HOM05D006513 ORTHO05D008150 4.0e-62 241.9 191 63.9
BcaC03g13734 Brassica carinata HOM05D006513 ORTHO05D008150 5.3e-62 241.5 191 61.3
CANSAT11G2038 Cannabis sativa HOM05D006513 ORTHO05D008150 6.9e-62 241.1 191 64.9
TWI34G1228 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 9.0e-62 240.7 191 64.9
arahy.Tifrunner.gnm1.ann1.7JIW3E Arachis hypogaea HOM05D006513 ORTHO05D008150 1.2e-61 240.4 198 62.6
BcaB05g22870 Brassica carinata HOM05D006513 ORTHO05D008150 1.5e-61 240.0 191 61.3
BolC2t07016H Brassica oleracea HOM05D006513 ORTHO05D008150 1.5e-61 240.0 191 60.7
EL10Ac8g18628 Beta vulgaris HOM05D006513 ORTHO05D008150 2.0e-61 239.6 194 63.9
Glyma.13G168100 Glycine max HOM05D006513 ORTHO05D008150 2.0e-61 239.6 197 63.5
Glyma.17G115800 Glycine max HOM05D006513 ORTHO05D008150 2.0e-61 239.6 197 62.4
AT5G20120 Arabidopsis thaliana HOM05D006513 ORTHO05D008150 2.6e-61 239.2 191 62.3
A02p06050 Brassica napus HOM05D006513 ORTHO05D008150 3.4e-61 238.8 191 60.7
BraA02t05556Z Brassica rapa HOM05D006513 ORTHO05D008150 3.4e-61 238.8 191 60.7
Prupe.7G240600 Prunus persica HOM05D006513 ORTHO05D008150 4.5e-61 238.4 190 63.7
HanXRQChr03g0062541 Helianthus annuus HOM05D006513 ORTHO05D008150 7.6e-61 237.7 192 65.1
AUR62033489 Chenopodium quinoa HOM05D006513 ORTHO05D008150 9.9e-61 237.3 193 63.7
Rhsim03G0247400 Rhododendron simsii HOM05D006513 ORTHO05D008150 1.3e-60 236.9 193 63.2
Phvul.003G163500 Phaseolus vulgaris HOM05D006513 ORTHO05D008150 1.7e-60 236.5 197 62.4
TWI63G1281 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 3.8e-60 235.3 194 63.9
THA.LOC104799645 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 1.1e-59 233.8 191 63.4
Aa31LG1G14240 Aethionema arabicum HOM05D006513 ORTHO05D008150 1.4e-59 233.4 191 61.3
Oeu021588.1 Olea europaea HOM05D006513 ORTHO05D008150 7.1e-59 231.1 161 76.4
Lalb_Chr13g0301941 Lupinus albus HOM05D006513 ORTHO05D008150 1.6e-58 229.9 200 62.0
Nn2g12003 Nelumbo nucifera HOM05D006513 ORTHO05D008150 1.6e-58 229.9 191 62.8
Sed0002363 Sechium edule HOM05D006513 ORTHO05D008150 1.6e-58 229.9 191 58.6
Actinidia07430 Actinidia chinensis HOM05D006513 ORTHO05D008150 3.5e-58 228.8 191 61.8
BNapus_Darmor_BZH_scaffold_38p01790 Brassica napus HOM05D006513 ORTHO05D008150 3.5e-58 228.8 197 58.9
RcHm_v2.0_Chr2g0089051 Rosa chinensis HOM05D006513 ORTHO05D008150 3.5e-58 228.8 192 63.0
Duzib150G1190 Durio zibethinus HOM05D006513 ORTHO05D008150 4.6e-58 228.4 187 61.5
Gohir.A08G239200 Gossypium hirsutum HOM05D006513 ORTHO05D008150 1.0e-57 227.3 191 60.7
Lalb_Chr12g0197841 Lupinus albus HOM05D006513 ORTHO05D008150 1.0e-57 227.3 200 60.0
QL02p087926 Quercus lobata HOM05D006513 ORTHO05D008150 1.8e-57 226.5 253 50.2
MD02G1034700 Malus domestica HOM05D006513 ORTHO05D008150 2.3e-57 226.1 190 63.2
Nn8g39411 Nelumbo nucifera HOM05D006513 ORTHO05D008150 2.3e-57 226.1 191 62.3
Sc08g0006720 Simmondsia chinensis HOM05D006513 ORTHO05D008150 1.9e-56 223.0 192 62.0
Aqoxy7G02130 Aquilegia oxysepala HOM05D006513 ORTHO05D008150 3.3e-56 222.2 192 60.9
FvH4_1g03550 Fragaria vesca HOM05D006513 ORTHO05D008150 2.8e-55 219.2 192 60.9
FAN19G1517 Fragaria x ananassa HOM05D006513 ORTHO05D008150 2.8e-55 219.2 192 60.9
Medtr4g114105 Medicago truncatula HOM05D006513 ORTHO05D008150 6.2e-55 218.0 185 60.0
FAN28G2022 Fragaria x ananassa HOM05D006513 ORTHO05D008150 8.1e-55 217.6 192 60.4
FAN26G1752 Fragaria x ananassa HOM05D006513 ORTHO05D008150 1.1e-54 217.2 192 60.4
Gorai.004G277700 Gossypium raimondii HOM05D006513 ORTHO05D008150 3.1e-54 215.7 225 53.3
TAR625G1184 Trochodendron aralioides HOM05D006513 ORTHO05D008150 2.2e-52 209.5 162 67.3
CsaV3_1G029880 Cucumis sativus L. HOM05D006513 ORTHO05D008150 3.2e-51 205.7 150 61.3
THA.LOC104811035 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 9.3e-51 204.1 178 58.4
Lj7A631T29 Lonicera japonica HOM05D006513 ORTHO05D008150 1.6e-50 203.4 144 70.1
MD15G1175500 Malus domestica HOM05D006513 ORTHO05D008150 2.1e-50 203.0 190 58.4
AUR62011112 Chenopodium quinoa HOM05D000667 ORTHO05D002614 1.3e-49 200.3 163 62.6
MELO3C010361.2 Cucumis melo HOM05D006513 ORTHO05D008150 6.7e-49 198.0 144 66.0
Ca_21690_v3 Cicer arietinum L. HOM05D006513 ORTHO05D008150 8.7e-49 197.6 153 61.4
arahy.Tifrunner.gnm1.ann1.PME717 Arachis hypogaea HOM05D006513 ORTHO05D008150 2.8e-47 192.6 193 57.5
Duzib168G2120 Durio zibethinus HOM05D006513 ORTHO05D008150 2.8e-47 192.6 153 64.7
TAR626G1980 Trochodendron aralioides HOM05D006513 ORTHO05D008150 5.9e-45 184.9 142 68.3
Nitab4.5_0010819g0020 Nicotiana tabacum HOM05D005868 ORTHO05D006964 1.0e-44 184.1 89 96.6
Nitab4.5_0017656g0020 Nicotiana tabacum HOM05D006513 ORTHO05D008150 1.7e-44 183.3 96 97.9
ClCG06G010970 Citrullus lanatus HOM05D006513 ORTHO05D008150 1.6e-42 176.8 158 56.3
MBI01_g37808_MAGBIO Magnolia biondii HOM05D006513 ORTHO05D008150 3.0e-41 172.6 191 52.4
HPP92_002794 Vanilla planifolia HOM05D006513 ORTHO05D008150 3.1e-38 162.5 192 49.0
VMungo1215G0117 Vigna mungo HOM05D006513 ORTHO05D008150 4.5e-37 158.7 192 49.0
Hund26496 Selenicereus undatus HOM05D006513 ORTHO05D008150 3.8e-36 155.6 134 58.2
SEGI_29438 Sequoiadendron giganteum HOM05D006513 ORTHO05D008150 3.7e-31 139.0 189 47.6
ATR1156G011 Amborella trichopoda HOM05D006513 ORTHO05D008150 9.1e-30 134.4 182 44.0
Pp3c5_25700 Physcomitrium patens HOM05D006513 ORTHO05D008150 2.9e-28 129.4 132 50.8
COL.COLO4_05780 Corchorus olitorius HOM05D006513 ORTHO05D008150 9.4e-27 124.4 89 68.5
Mapoly0015s0101 Marchantia polymorpha HOM05D006513 ORTHO05D008150 6.7e-25 118.2 163 39.3
Gohir.D08G259900 Gossypium hirsutum HOM05D006513 ORTHO05D008150 2.8e-23 112.8 103 54.4
Duzib150G1040 Durio zibethinus HOM05D006513 ORTHO05D008150 7.0e-22 108.2 96 53.1
AagrBONN_evm.TU.Sc2ySwM_340.153 Anthoceros agrestis HOM05D006513 ORTHO05D008150 1.7e-20 103.6 133 41.4
TAR636G0633 Trochodendron aralioides HOM05D005966 ORTHO05D007584 7.2e-19 98.2 89 61.8
CBR_g6525 Chara braunii HOM05D006513 ORTHO05D008150 4.7e-18 95.5 121 39.7
Rhsim02G0222800 Rhododendron simsii HOM05D006513 ORTHO05D008150 6.1e-18 95.1 77 63.6
TAR090G0005 Trochodendron aralioides HOM05D006513 ORTHO05D008150 2.6e-16 89.7 68 70.6
HPP92_027747 Vanilla planifolia HOM05D006513 ORTHO05D008150 1.0e-12 77.8 100 45.0
Pp3c25_13070 Physcomitrium patens HOM05D006513 ORTHO05D008150 1.9e-11 73.6 95 36.8
AUR62043674 Chenopodium quinoa HOM05D006513 ORTHO05D003876 2.6e-08 63.2 51 62.7
RcHm_v2.0_Chr7g0212941 Rosa chinensis HOM05D006513 ORTHO05D008150 2.8e-07 59.7 52 63.5
vmacro22116 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 1.1e-06 57.8 96 44.8


User provided reference genes

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