Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002552g0050 Nicotiana tabacum HOM05D006585 ORTHO05D007798 3.2e-133 478.4 239 100.0
Nitab4.5_0002255g0100 Nicotiana tabacum HOM05D006585 ORTHO05D007798 1.5e-114 416.4 295 76.9
Peaxi162Scf00128g00033 Petunia axillaris HOM05D006585 ORTHO05D007798 5.2e-83 311.6 307 60.3
Sopen05g008150 Solanum pennellii HOM05D006585 ORTHO05D007798 1.4e-80 303.5 293 61.4
Solyc05g013360.3 Solanum lycopersicum HOM05D006585 ORTHO05D007798 2.4e-80 302.8 293 61.1
Dinv24805 Davidia involucrata HOM05D006585 ORTHO05D007798 3.2e-48 196.1 294 44.6
Oeu049180.1 Olea europaea HOM05D006585 ORTHO05D007798 8.1e-44 181.4 269 43.9
Lj6C811T17 Lonicera japonica HOM05D006585 ORTHO05D007798 2.9e-41 172.9 274 42.3
arahy.Tifrunner.gnm1.ann1.QD46ZG Arachis hypogaea HOM05D006585 ORTHO05D007798 8.4e-41 171.4 263 41.1
DCAR_031138 Daucus carota HOM05D006585 ORTHO05D007798 1.4e-40 170.6 284 37.7
arahy.Tifrunner.gnm1.ann1.I6QGYY Arachis hypogaea HOM05D006585 ORTHO05D007798 5.4e-40 168.7 269 40.1
Duzib248G0505 Durio zibethinus HOM05D006585 ORTHO05D007798 1.6e-39 167.2 269 39.0
Prupe.1G247600 Prunus persica HOM05D006585 ORTHO05D007798 1.6e-39 167.2 282 39.0
TWI36G0027 Tripterygium wilfordii HOM05D006585 ORTHO05D007798 7.8e-39 164.9 268 39.9
ClCG08G017740 Citrullus lanatus HOM05D006585 ORTHO05D007798 8.7e-38 161.4 285 38.2
Actinidia27800 Actinidia chinensis HOM05D006585 ORTHO05D007798 1.1e-37 161.0 306 37.6
FvH4_4g25900 Fragaria vesca HOM05D006585 ORTHO05D007798 1.9e-37 160.2 306 35.3
Glyma.18G143200 Glycine max HOM05D006585 ORTHO05D007798 1.9e-37 160.2 271 38.4
Cpa.g.sc33.3 Carica papaya HOM05D006585 ORTHO05D007798 7.3e-37 158.3 282 41.5
RcHm_v2.0_Chr4g0433351 Rosa chinensis HOM05D006585 ORTHO05D007798 1.6e-36 157.1 306 35.0
TWI75G0333 Tripterygium wilfordii HOM05D006585 ORTHO05D007798 4.8e-36 155.6 269 37.9
Cfa009198 Carpinus fangiana HOM05D006585 ORTHO05D007798 6.2e-36 155.2 275 40.0
Phvul.003G063800 Phaseolus vulgaris HOM05D006585 ORTHO05D007798 6.2e-36 155.2 267 38.6
QL03p058556 Quercus lobata HOM05D006585 ORTHO05D007798 1.1e-35 154.5 289 41.2
COL.COLO4_24245 Corchorus olitorius HOM05D006585 ORTHO05D002520 1.4e-35 154.1 271 37.3
Manes.13G025900 Manihot esculenta HOM05D006585 ORTHO05D007798 1.4e-35 154.1 287 38.7
FAN12G1097 Fragaria x ananassa HOM05D006585 ORTHO05D007798 2.4e-35 153.3 318 34.3
FAN12G1379 Fragaria x ananassa HOM05D006585 ORTHO05D007798 2.4e-35 153.3 318 34.3
Potri.010G044800 Populus trichocarpa HOM05D006585 ORTHO05D007798 4.0e-35 152.5 296 38.9
Migut.E00193 Erythranthe guttata HOM05D006585 ORTHO05D007798 6.9e-35 151.8 179 44.1
Sed0016045 Sechium edule HOM05D006585 ORTHO05D007798 6.9e-35 151.8 284 38.0
Gorai.005G179800 Gossypium raimondii HOM05D006585 ORTHO05D007798 1.2e-34 151.0 281 37.4
Thecc.02G257200 Theobroma cacao HOM05D006585 ORTHO05D007798 5.8e-34 148.7 275 35.6
Medtr2g079800 Medicago truncatula HOM05D006585 ORTHO05D007798 7.6e-34 148.3 272 38.6
FAN17G2552 Fragaria x ananassa HOM05D006585 ORTHO05D007798 9.9e-34 147.9 318 34.0
CiPaw.05G183700 Carya illinoinensis HOM05D006585 ORTHO05D007798 2.9e-33 146.4 259 40.9
TAR371G0523 Trochodendron aralioides HOM05D006585 ORTHO05D007798 2.9e-33 146.4 279 37.6
Lj4g0008721 Lotus japonicus HOM05D006585 ORTHO05D007798 4.9e-33 145.6 274 36.9
Medtr8g069560 Medicago truncatula HOM05D006585 ORTHO05D007798 4.9e-33 145.6 300 36.3
Gohir.A03G136500 Gossypium hirsutum HOM05D006585 ORTHO05D007798 6.4e-33 145.2 277 36.1
MD13G1097900 Malus domestica HOM05D006585 ORTHO05D007798 3.2e-32 142.9 308 34.7
Psat1g023160 Pisum sativum HOM05D006585 ORTHO05D007798 3.2e-32 142.9 273 37.7
Aqoxy5G03808 Aquilegia oxysepala HOM05D006585 ORTHO05D007798 4.2e-32 142.5 261 36.8
HanXRQChr17g0539731 Helianthus annuus HOM05D006585 ORTHO05D007798 5.4e-32 142.1 286 36.4
FAN07G1571 Fragaria x ananassa HOM05D006585 ORTHO05D007798 9.3e-32 141.4 149 49.0
Lsat_1_v5_gn_3_28841 Lactuca sativa HOM05D006585 ORTHO05D007798 4.6e-31 139.0 208 43.3
Prupe.1G247500 Prunus persica HOM05D006585 ORTHO05D007798 1.8e-30 137.1 181 43.6
MD13G1097800 Malus domestica HOM05D006585 ORTHO05D007798 2.3e-30 136.7 325 33.8
Gohir.D02G159700 Gossypium hirsutum HOM05D006585 ORTHO05D007798 3.9e-30 136.0 208 39.9
ECA246G2324 Erigeron canadensis HOM05D000225 ORTHO05D002520 1.9e-29 133.7 176 45.5
THA.LOC104823651 Tarenaya hassleriana HOM05D006585 ORTHO05D007798 2.5e-29 133.3 284 35.2
SGA_v2.0_scaffold63G21726 Striga asiatica HOM05D006585 ORTHO05D007798 4.3e-29 132.5 198 39.9
VMungo0251G2192 Vigna mungo HOM05D006585 ORTHO05D007798 4.3e-29 132.5 271 35.8
FAN22G0568 Fragaria x ananassa HOM05D006585 ORTHO05D007798 7.4e-29 131.7 164 45.7
Sabra10G0023300 Salix brachista HOM05D000740 ORTHO05D003236 7.4e-29 131.7 188 45.7
CANSAT01G1755 Cannabis sativa HOM05D006585 ORTHO05D007798 6.2e-28 128.6 159 46.5
GSVIVG01004087001 Vitis vinifera HOM05D006585 ORTHO05D007798 6.2e-28 128.6 270 37.0
Cc11_g15560 Coffea canephora HOM05D006585 ORTHO05D007798 2.4e-27 126.7 291 36.4
EL10Ac6g13783 Beta vulgaris HOM05D006585 ORTHO05D007798 6.9e-27 125.2 261 35.2
Dinv20613 Davidia involucrata HOM05D006585 ORTHO05D007798 4.5e-26 122.5 292 34.9
AT1G10710 Arabidopsis thaliana HOM05D006585 ORTHO05D007798 7.6e-26 121.7 347 30.8
BcaB08g37368 Brassica carinata HOM05D006585 ORTHO05D007798 9.9e-26 121.3 171 44.4
SGA_v2.0_scaffold87G27084 Striga asiatica HOM05D006585 ORTHO05D007798 9.9e-26 121.3 264 35.6
Sp1g09410 Schrenkiella parvula HOM05D006585 ORTHO05D007798 1.3e-25 120.9 304 30.9
Sc04g0009420 Simmondsia chinensis HOM05D006585 ORTHO05D007798 2.9e-25 119.8 292 32.5
Ca_22577_v3 Cicer arietinum L. HOM05D006585 ORTHO05D007798 4.9e-25 119.0 271 35.1
Thhalv10007956m.g Eutrema salsugineum HOM05D006585 ORTHO05D007798 5.5e-24 115.5 172 42.4
BcaC07g41800 Brassica carinata HOM05D006585 ORTHO05D007798 7.1e-24 115.2 168 42.3
MBI10_g00733_MAGBIO Magnolia biondii HOM05D006585 ORTHO05D007798 3.5e-23 112.8 189 40.7
Nn3g16750 Nelumbo nucifera HOM05D006585 ORTHO05D007798 3.5e-23 112.8 294 35.0
Carub.0001s1022 Capsella rubella HOM05D006585 ORTHO05D007798 4.6e-23 112.5 212 35.8
SalBow8G1297 Salvia bowleyana HOM05D006585 ORTHO05D007798 1.0e-22 111.3 139 41.7
COL.COLO4_30156 Corchorus olitorius HOM05D006585 ORTHO05D007798 1.8e-22 110.5 163 39.9
AUR62024297 Chenopodium quinoa HOM05D006585 ORTHO05D007798 2.3e-22 110.2 259 32.8
AL1G21590 Arabidopsis lyrata HOM05D006585 ORTHO05D007798 3.0e-22 109.8 214 36.0
Aa31LG1G4120 Aethionema arabicum HOM05D006585 ORTHO05D007798 6.7e-22 108.6 176 38.1
Ah.03g133160 Amaranthus hybridus HOM05D006585 ORTHO05D007798 1.1e-21 107.8 259 30.5
GSVIVG01007676001 Vitis vinifera HOM05D006585 ORTHO05D007798 2.5e-21 106.7 186 37.1
BraA09t41832Z Brassica rapa HOM05D006585 ORTHO05D007798 4.3e-21 105.9 169 40.8
Ciclev10033875m.g Citrus clementina HOM05D006585 ORTHO05D007798 4.3e-21 105.9 172 39.5
CSS0026295 Camellia sinensis var. sinensis HOM05D006585 ORTHO05D007798 5.6e-21 105.5 121 48.8
C08p48610 Brassica napus HOM05D006585 ORTHO05D007798 1.6e-20 104.0 188 37.2
MBI16_g23844_MAGBIO Magnolia biondii HOM05D006585 ORTHO05D007798 1.6e-20 104.0 274 32.5
TAR629G0056 Trochodendron aralioides HOM05D006585 ORTHO05D007798 1.6e-20 104.0 168 43.5
ATR1154G038 Amborella trichopoda HOM05D006585 ORTHO05D007798 3.7e-20 102.8 152 38.2
Glyma.08G283200 Glycine max HOM05D006585 ORTHO05D007798 6.2e-20 102.1 87 57.5
ATR1154G026 Amborella trichopoda HOM05D006585 ORTHO05D007798 8.2e-20 101.7 161 36.6
CARHR010890 Cardamine hirsuta HOM05D006585 ORTHO05D007798 8.2e-20 101.7 168 40.5
PSO063G7660 Papaver somniferum HOM05D000629 ORTHO05D007798 6.9e-19 98.6 140 37.9
PSO832G3049 Papaver somniferum HOM05D000629 ORTHO05D007798 1.2e-18 97.8 166 37.3
A09p64570 Brassica napus HOM05D006585 ORTHO05D007798 4.5e-18 95.9 168 39.9
BolC8t52400H Brassica oleracea HOM05D006585 ORTHO05D007798 4.9e-17 92.4 115 45.2
HPP92_008331 Vanilla planifolia HOM05D006585 ORTHO05D007798 6.5e-17 92.0 154 36.4
Thecc.03G022200 Theobroma cacao HOM05D006585 ORTHO05D007798 4.2e-16 89.4 110 46.4
Zm00001eb382430 Zea mays HOM05D006585 ORTHO05D007798 3.5e-15 86.3 193 34.2
Cc04_g11830 Coffea canephora HOM05D006585 ORTHO05D007798 2.3e-14 83.6 174 32.2
Rhsim12G0041300 Rhododendron simsii HOM05D006585 ORTHO05D007798 1.5e-13 80.9 188 33.5
Lalb_Chr16g0392221 Lupinus albus HOM05D006585 ORTHO05D007798 5.7e-13 79.0 191 33.5
SEGI_25539 Sequoiadendron giganteum HOM05D006585 ORTHO05D007798 1.8e-11 73.9 140 34.3
EL10Ac5g10683 Beta vulgaris HOM05D006585 ORTHO05D007798 1.2e-10 71.2 115 40.0
PSO063G0496 Papaver somniferum HOM05D006585 ORTHO05D007798 1.5e-10 70.9 140 34.3
PSO832G2940 Papaver somniferum HOM05D006585 ORTHO05D007798 1.5e-10 70.9 77 45.5
SHI17754 Sapria himalayana HOM05D006585 ORTHO05D007798 2.9e-09 66.6 54 53.7
Haze_12236 Corylus avellana HOM05D006585 ORTHO05D007798 3.8e-09 66.2 202 30.7
PGR119G1584 Punica granatum HOM05D006585 ORTHO05D007798 8.5e-09 65.1 270 24.4
Actinidia08143 Actinidia chinensis HOM05D006585 ORTHO05D007798 1.2e-07 61.2 302 25.5
SGA_v2.0_scaffold779G53588 Striga asiatica HOM05D006585 ORTHO05D007798 3.9e-06 56.2 111 36.9
SGA_v2.0_scaffold34G13586 Striga asiatica HOM05D006585 ORTHO05D007798 6.7e-06 55.5 111 36.9


User provided reference genes

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