Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002551g0020 Nicotiana tabacum HOM05D006393 ORTHO05D008088 2.7e-155 552.0 288 100.0
CAN.G1665.6 Capsicum annuum HOM05D006393 ORTHO05D008088 2.6e-145 518.8 288 92.7
Solyc10g079970.2 Solanum lycopersicum HOM05D006393 ORTHO05D008088 3.0e-141 505.4 288 90.3
Sopen10g030590 Solanum pennellii HOM05D006393 ORTHO05D008088 6.6e-141 504.2 288 90.3
PGSC0003DMG401029823 Solanum tuberosum HOM05D006393 ORTHO05D008088 4.3e-140 501.5 288 90.3
Nitab4.5_0010615g0010 Nicotiana tabacum HOM05D006393 ORTHO05D008088 2.2e-128 462.6 249 96.0
CSS0031330 Camellia sinensis var. sinensis HOM05D006393 ORTHO05D008088 6.2e-123 444.5 288 78.8
Migut.C00826 Erythranthe guttata HOM05D006393 ORTHO05D008088 2.3e-122 442.6 288 75.0
Actinidia09396 Actinidia chinensis HOM05D006393 ORTHO05D008088 3.1e-122 442.2 288 78.5
Cfa003299 Carpinus fangiana HOM05D006393 ORTHO05D008088 5.2e-122 441.4 288 78.1
CiPaw.03G236400 Carya illinoinensis HOM05D006393 ORTHO05D008088 5.2e-122 441.4 288 77.1
Haze_25669 Corylus avellana HOM05D006393 ORTHO05D008088 5.2e-122 441.4 288 78.8
QL02p086364 Quercus lobata HOM05D006393 ORTHO05D008088 1.2e-121 440.3 287 76.7
Rhsim01G0090600 Rhododendron simsii HOM05D006393 ORTHO05D008088 1.2e-121 440.3 288 76.7
vmacro20677 Vaccinium macrocarpon HOM05D006393 ORTHO05D008088 5.8e-121 438.0 288 76.7
Peaxi162Scf00223g01425 Petunia axillaris HOM05D006393 ORTHO05D008088 9.9e-121 437.2 301 80.4
Atru.chr7.1280 Acer truncatum HOM05D006393 ORTHO05D008088 1.3e-120 436.8 288 75.7
TWI34G1546 Tripterygium wilfordii HOM05D006393 ORTHO05D008088 2.9e-120 435.6 288 75.0
COL.COLO4_34948 Corchorus olitorius HOM05D006393 ORTHO05D008088 3.7e-120 435.3 288 75.7
SGA_v2.0_scaffold92G28235 Striga asiatica HOM05D006393 ORTHO05D008088 8.4e-120 434.1 288 76.4
Duzib168G1441 Durio zibethinus HOM05D006393 ORTHO05D008088 1.4e-119 433.3 288 75.3
MSTRG.1197 Avicennia marina HOM05D006393 ORTHO05D008088 2.4e-119 432.6 288 75.0
Ciclev10008889m.g Citrus clementina HOM05D006393 ORTHO05D008088 3.2e-119 432.2 288 75.0
Prupe.7G235100 Prunus persica HOM05D006393 ORTHO05D008088 4.1e-119 431.8 288 76.0
MELO3C025307.2 Cucumis melo HOM05D006393 ORTHO05D008088 5.4e-119 431.4 288 74.3
Manes.16G064200 Manihot esculenta HOM05D006393 ORTHO05D008088 1.2e-118 430.3 288 74.3
Hma1.2p1_0018F.1_g013070 Hydrangea macrophylla HOM05D006393 ORTHO05D008088 2.1e-118 429.5 288 77.1
CsaV3_1G030940 Cucumis sativus L. HOM05D006393 ORTHO05D008088 3.5e-118 428.7 288 74.0
Thecc.09G116800 Theobroma cacao HOM05D006393 ORTHO05D008088 1.0e-117 427.2 288 74.7
Potri.018G073000 Populus trichocarpa HOM05D006393 ORTHO05D008088 6.6e-117 424.5 288 74.3
Sed0023374 Sechium edule HOM05D006393 ORTHO05D008088 1.5e-116 423.3 288 71.5
GSVIVG01015453001 Vitis vinifera HOM05D006393 ORTHO05D008088 5.6e-116 421.4 288 74.0
Cpa.g.sc23.161 Carica papaya HOM05D006393 ORTHO05D008088 7.3e-116 421.0 288 73.3
AUR62033415 Chenopodium quinoa HOM05D006393 ORTHO05D008088 8.1e-115 417.5 288 71.5
PGR102G0276 Punica granatum HOM05D006393 ORTHO05D008088 1.4e-114 416.8 288 73.6
ClCG06G010490 Citrullus lanatus HOM05D006393 ORTHO05D008088 2.4e-114 416.0 289 72.3
FvH4_1g04221 Fragaria vesca HOM05D006393 ORTHO05D008088 2.4e-114 416.0 288 70.1
RcHm_v2.0_Chr2g0089771 Rosa chinensis HOM05D006393 ORTHO05D008088 3.1e-114 415.6 288 71.5
MD02G1061500 Malus domestica HOM05D006393 ORTHO05D008088 8.9e-114 414.1 288 72.2
DCAR_010438 Daucus carota HOM05D006393 ORTHO05D008088 1.5e-113 413.3 288 71.5
unitig_37.g13035 Utricularia gibba HOM05D006393 ORTHO05D008088 2.0e-113 412.9 288 71.9
Hund09172 Selenicereus undatus HOM05D006393 ORTHO05D008088 1.3e-112 410.2 288 70.8
Gohir.A06G059900 Gossypium hirsutum HOM05D006393 ORTHO05D008088 1.9e-111 406.4 288 71.2
Gorai.010G068300 Gossypium raimondii HOM05D006393 ORTHO05D008088 1.9e-111 406.4 288 71.2
Gohir.D06G058100 Gossypium hirsutum HOM05D006393 ORTHO05D008088 2.4e-111 406.0 288 70.8
Aqoxy7G01879 Aquilegia oxysepala HOM05D006393 ORTHO05D008088 3.2e-111 405.6 287 70.4
Nn8g39292 Nelumbo nucifera HOM05D006393 ORTHO05D008088 9.3e-111 404.1 288 71.2
Oeu046267.2 Olea europaea HOM05D006393 ORTHO05D008088 1.2e-110 403.7 426 54.5
PSO782G0281 Papaver somniferum HOM05D006393 ORTHO05D008088 1.2e-110 403.7 282 72.3
Lalb_Chr13g0302251 Lupinus albus HOM05D006393 ORTHO05D008088 3.5e-110 402.1 283 71.4
Sabra18G0063700 Salix brachista HOM05D006393 ORTHO05D008088 3.5e-110 402.1 288 71.5
arahy.Tifrunner.gnm1.ann1.3AE437 Arachis hypogaea HOM05D006393 ORTHO05D008088 4.6e-110 401.7 279 71.7
HanXRQChr03g0062141 Helianthus annuus HOM05D006393 ORTHO05D008088 6.0e-110 401.4 288 70.8
arahy.Tifrunner.gnm1.ann1.RZM4QH Arachis hypogaea HOM05D006393 ORTHO05D008088 7.8e-110 401.0 282 70.9
Sp6g24450 Schrenkiella parvula HOM05D006393 ORTHO05D008088 1.5e-108 396.7 279 69.5
Lj7A639G46 Lonicera japonica HOM05D006393 ORTHO05D008088 2.5e-108 396.0 322 64.9
BcaB08g36553 Brassica carinata HOM05D006393 ORTHO05D008088 5.6e-108 394.8 278 70.1
AL6G31460 Arabidopsis lyrata HOM05D006393 ORTHO05D008088 7.3e-108 394.4 279 69.2
AT5G19930 Arabidopsis thaliana HOM05D006393 ORTHO05D008088 9.6e-108 394.0 278 69.4
Carub.0006s1830 Capsella rubella HOM05D006393 ORTHO05D008088 1.6e-107 393.3 279 68.5
Eucgr.C04142 Eucalyptus grandis HOM05D006393 ORTHO05D008088 4.8e-107 391.7 252 75.0
BcaC04g19399 Brassica carinata HOM05D006393 ORTHO05D008088 6.2e-107 391.3 278 69.1
C09p56120 Brassica napus HOM05D006393 ORTHO05D008088 6.2e-107 391.3 278 69.1
BolC9t58479H Brassica oleracea HOM05D006393 ORTHO05D008088 6.2e-107 391.3 278 69.1
A10p19800 Brassica napus HOM05D006393 ORTHO05D008088 8.1e-107 391.0 278 69.1
BraA10t44056Z Brassica rapa HOM05D006393 ORTHO05D008088 1.1e-106 390.6 278 68.7
Aa31LG9G6050 Aethionema arabicum HOM05D006393 ORTHO05D008088 1.2e-105 387.1 279 68.1
CDE06G0973 Ceratophyllum demersum HOM05D006393 ORTHO05D008088 3.4e-105 385.6 288 67.7
Thhalv10014278m.g Eutrema salsugineum HOM05D006393 ORTHO05D008088 5.8e-105 384.8 278 68.0
Psat4g042480 Pisum sativum HOM05D006393 ORTHO05D008088 5.8e-105 384.8 283 67.8
AUR62011040 Chenopodium quinoa HOM05D006393 ORTHO05D008088 9.9e-105 384.0 264 72.0
EL10Ac8g18557 Beta vulgaris HOM05D006393 ORTHO05D008088 1.3e-104 383.6 288 67.7
VMungo1215G0586 Vigna mungo HOM05D006393 ORTHO05D008088 3.8e-104 382.1 282 68.4
Medtr4g112990 Medicago truncatula HOM05D006393 ORTHO05D008088 1.4e-103 380.2 283 66.1
Ca_21724_v3 Cicer arietinum L. HOM05D006393 ORTHO05D008088 1.9e-103 379.8 282 67.7
FAN23G0113 Fragaria x ananassa HOM05D006393 ORTHO05D008088 3.2e-103 379.0 288 66.3
Lsat_1_v5_gn_7_42880 Lactuca sativa HOM05D006393 ORTHO05D008088 5.4e-103 378.3 288 66.7
MBI01_g13571_MAGBIO Magnolia biondii HOM05D006393 ORTHO05D008088 9.3e-103 377.5 290 67.9
Phvul.003G159300 Phaseolus vulgaris HOM05D006393 ORTHO05D008088 2.7e-102 375.9 282 67.7
MBI04_g35350_MAGBIO Magnolia biondii HOM05D006393 ORTHO05D008088 3.5e-102 375.6 249 74.7
TPR.G26762 Trifolium pratense HOM05D006393 ORTHO05D008088 1.0e-101 374.0 283 65.4
Lj4g0026371 Lotus japonicus HOM05D006393 ORTHO05D008088 8.7e-101 370.9 282 66.7
Ah.14g081310 Amaranthus hybridus HOM05D006393 ORTHO05D008088 7.4e-100 367.9 348 57.8
Os01g0507300 Oryza sativa ssp. japonica HOM05D006393 ORTHO05D008088 4.8e-99 365.2 280 65.4
Glyma.17G120200 Glycine max HOM05D006393 ORTHO05D008088 1.1e-98 364.0 285 65.6
Zm00001eb106640 Zea mays HOM05D006393 ORTHO05D008088 3.4e-97 359.0 280 62.1
Cc06_g09230 Coffea canephora HOM05D006393 ORTHO05D008088 5.8e-97 358.2 236 77.1
THA.LOC104815111 Tarenaya hassleriana HOM05D006393 ORTHO05D008088 5.8e-97 358.2 279 65.2
Peaxi162Scf00223g01424 Petunia axillaris HOM05D006393 ORTHO05D008088 1.4e-95 353.6 244 78.3
HPP92_009792 Vanilla planifolia HOM05D006393 ORTHO05D008088 3.2e-95 352.4 288 62.8
HPP92_008697 Vanilla planifolia HOM05D006393 ORTHO05D008088 3.5e-94 349.0 280 63.2
SEGI_37175 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 7.4e-92 341.3 288 60.4
Zm00001eb122440 Zea mays HOM05D006393 ORTHO05D008088 3.7e-91 339.0 273 64.1
Sc07g0007380 Simmondsia chinensis HOM05D006393 ORTHO05D008088 8.1e-91 337.8 236 71.6
ATR0083G026 Amborella trichopoda HOM05D006393 ORTHO05D008088 1.4e-90 337.0 279 64.5
SalBow7G4467 Salvia bowleyana HOM05D006393 ORTHO05D008088 1.8e-90 336.7 288 62.5
Os01g0178200 Oryza sativa ssp. japonica HOM05D006393 ORTHO05D008088 1.7e-88 330.1 322 56.5
Dinv41564 Davidia involucrata HOM05D006752 ORTHO05D008088 9.3e-87 324.3 196 81.6
ECA240G0151 Erigeron canadensis HOM05D006393 ORTHO05D008088 3.5e-86 322.4 221 73.3
Mapoly0052s0018 Marchantia polymorpha HOM05D006393 ORTHO05D008088 2.9e-80 302.8 284 54.2
Pp3c12_24880 Physcomitrium patens HOM05D006393 ORTHO05D008088 1.6e-78 297.0 282 53.9
CARHR192920 Cardamine hirsuta HOM05D006393 ORTHO05D008088 1.0e-77 294.3 200 71.5
Oeu027539.2 Olea europaea HOM05D006393 ORTHO05D008088 5.1e-77 292.0 292 57.2
SMO340G0297 Selaginella moellendorffii HOM05D006393 ORTHO05D008088 8.7e-77 291.2 284 53.2
TAR636G2166 Trochodendron aralioides HOM05D006393 ORTHO05D008088 7.4e-60 235.0 143 81.1
CDE07G1479 Ceratophyllum demersum HOM05D006393 ORTHO05D008088 3.7e-51 206.1 164 59.8
PRCOL_00002470 Prasinoderma coloniale HOM05D006393 ORTHO05D008088 3.7e-51 206.1 276 44.2
Cre17.g726350 Chlamydomonas reinhardtii HOM05D006393 ORTHO05D008088 1.7e-48 197.2 327 39.4
SEGI_23420 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 6.1e-46 188.7 181 52.5
Psat6g218400 Pisum sativum HOM05D006393 ORTHO05D008088 2.8e-38 163.3 116 72.4
SEGI_36873 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 5.7e-36 155.6 181 49.7
Glyma.05G012000 Glycine max HOM05D006393 ORTHO05D008088 1.8e-34 150.6 117 68.4
Eucgr.L03082 Eucalyptus grandis HOM05D006393 ORTHO05D008088 5.4e-34 149.1 131 56.5
MCO12G460 Micromonas commoda HOM05D006393 ORTHO05D008088 3.5e-33 146.4 167 48.5
Cre02.g118200 Chlamydomonas reinhardtii HOM05D006393 ORTHO05D008088 5.0e-32 142.5 332 33.4
Psat5g214680 Pisum sativum HOM05D006393 ORTHO05D008088 4.4e-28 129.4 95 67.4
SEGI_10855 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 1.7e-27 127.5 189 42.3
Eucgr.E03680 Eucalyptus grandis HOM05D006393 ORTHO05D008088 4.6e-25 119.4 96 59.4
Zm00001eb342450 Zea mays HOM05D006393 ORTHO05D008088 1.9e-23 114.0 167 41.3
vmacro16552 Vaccinium macrocarpon HOM05D006393 ORTHO05D008088 1.3e-08 64.7 143 36.4
SEGI_30446 Sequoiadendron giganteum HOM05D006393 ORTHO05D000979 2.3e-08 63.9 58 53.4
TAR636G3545 Trochodendron aralioides HOM05D006393 ORTHO05D008088 3.0e-08 63.5 50 64.0
SEGI_14370 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 2.5e-07 60.5 58 50.0


User provided reference genes

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