Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002544g0040 Nicotiana tabacum HOM05D006500 ORTHO05D008028 1.9e-86 322.4 157 100.0
Nitab4.5_0001586g0010 Nicotiana tabacum HOM05D006500 ORTHO05D008028 3.8e-82 308.1 155 96.1
Solyc06g053430.4 Solanum lycopersicum HOM05D006500 ORTHO05D008028 4.8e-77 291.2 157 89.2
Sopen06g018490 Solanum pennellii HOM05D006500 ORTHO05D008028 4.8e-77 291.2 157 89.2
PGSC0003DMG400016334 Solanum tuberosum HOM05D006500 ORTHO05D008028 4.8e-77 291.2 157 89.2
CAN.G136.13 Capsicum annuum HOM05D006500 ORTHO05D008028 9.0e-76 287.0 157 87.3
Peaxi162Scf00180g00116 Petunia axillaris HOM05D006500 ORTHO05D008028 1.8e-71 272.7 158 84.8
GSVIVG01038143001 Vitis vinifera HOM05D006500 ORTHO05D008028 7.1e-65 250.8 148 81.1
CSS0014789 Camellia sinensis var. sinensis HOM05D006500 ORTHO05D008028 2.1e-64 249.2 154 75.3
vmacro00698 Vaccinium macrocarpon HOM05D006500 ORTHO05D008028 2.7e-64 248.8 154 73.4
MSTRG.4301 Avicennia marina HOM05D006500 ORTHO05D008028 1.0e-63 246.9 137 83.9
CiPaw.02G100400 Carya illinoinensis HOM05D006500 ORTHO05D008028 1.8e-63 246.1 157 73.9
Oeu050336.1 Olea europaea HOM05D006500 ORTHO05D008028 2.3e-63 245.7 156 76.3
Rhsim09G0010200 Rhododendron simsii HOM05D006500 ORTHO05D008028 2.3e-63 245.7 152 75.7
Migut.G01179 Erythranthe guttata HOM05D006500 ORTHO05D008028 3.9e-63 245.0 137 81.8
SGA_v2.0_scaffold283G46959 Striga asiatica HOM05D006500 ORTHO05D008028 3.9e-63 245.0 147 78.9
SalBow3G2241 Salvia bowleyana HOM05D006500 ORTHO05D008028 5.1e-63 244.6 156 78.2
Actinidia27113 Actinidia chinensis HOM05D006500 ORTHO05D008028 1.1e-62 243.4 154 74.7
QL10p055774 Quercus lobata HOM05D006500 ORTHO05D008028 1.5e-62 243.0 153 75.2
DCAR_023930 Daucus carota HOM05D006500 ORTHO05D008028 3.3e-62 241.9 152 73.0
Oeu015723.1 Olea europaea HOM05D006500 ORTHO05D008028 4.3e-62 241.5 137 81.0
Cc03_g14120 Coffea canephora HOM05D006500 ORTHO05D008028 5.7e-62 241.1 156 75.0
FAN17G0772 Fragaria x ananassa HOM05D006500 ORTHO05D008028 5.7e-62 241.1 150 74.7
Dinv33205 Davidia involucrata HOM05D006500 ORTHO05D008028 7.4e-62 240.7 154 73.4
Hma1.2p1_0108F.1_g051720 Hydrangea macrophylla HOM05D006500 ORTHO05D008028 9.7e-62 240.4 152 71.7
MD17G1177800 Malus domestica HOM05D006500 ORTHO05D008028 9.7e-62 240.4 159 73.0
COL.COLO4_08138 Corchorus olitorius HOM05D006500 ORTHO05D008028 1.3e-61 240.0 140 77.9
Potri.019G112100 Populus trichocarpa HOM05D006500 ORTHO05D008028 1.3e-61 240.0 137 79.6
Thecc.04G165600 Theobroma cacao HOM05D006500 ORTHO05D008028 2.1e-61 239.2 134 79.9
FvH4_4g10450 Fragaria vesca HOM05D006500 ORTHO05D008028 2.8e-61 238.8 150 74.0
Sed0015541 Sechium edule HOM05D006500 ORTHO05D008028 2.8e-61 238.8 137 79.6
MD04G1049100 Malus domestica HOM05D006500 ORTHO05D008028 3.7e-61 238.4 161 72.0
TWI38G1400 Tripterygium wilfordii HOM05D006500 ORTHO05D008028 3.7e-61 238.4 137 79.6
AUR62023794 Chenopodium quinoa HOM05D006500 ORTHO05D008028 4.8e-61 238.0 155 71.0
Sabra19G0108100 Salix brachista HOM05D006500 ORTHO05D008028 4.8e-61 238.0 137 78.8
CiPaw.01G170700 Carya illinoinensis HOM05D006500 ORTHO05D008028 6.3e-61 237.7 154 72.1
Prupe.1G207200 Prunus persica HOM05D006500 ORTHO05D008028 6.3e-61 237.7 155 74.8
Lalb_Chr09g0328101 Lupinus albus HOM05D006500 ORTHO05D008028 8.2e-61 237.3 137 78.1
AUR62002395 Chenopodium quinoa HOM05D006500 ORTHO05D008028 1.1e-60 236.9 154 70.1
FAN12G2511 Fragaria x ananassa HOM05D006500 ORTHO05D008028 1.1e-60 236.9 150 73.3
Psat7g120240 Pisum sativum HOM05D006500 ORTHO05D008028 1.1e-60 236.9 146 74.7
TAR365G1104 Trochodendron aralioides HOM05D006500 ORTHO05D008028 1.1e-60 236.9 134 79.9
RcHm_v2.0_Chr4g0405941 Rosa chinensis HOM05D006500 ORTHO05D008028 1.8e-60 236.1 150 74.7
AT1G05720 Arabidopsis thaliana HOM05D006500 ORTHO05D008028 2.4e-60 235.7 154 71.4
EL10Ac3g06088 Beta vulgaris HOM05D006500 ORTHO05D008028 2.4e-60 235.7 154 70.1
Thhalv10008926m.g Eutrema salsugineum HOM05D006500 ORTHO05D008028 2.4e-60 235.7 134 79.1
ClCG06G001100 Citrullus lanatus HOM05D006500 ORTHO05D008028 3.1e-60 235.3 137 78.1
Duzib268G0518 Durio zibethinus HOM05D006500 ORTHO05D008028 3.1e-60 235.3 133 78.9
Sp1g04540 Schrenkiella parvula HOM05D006500 ORTHO05D008028 3.1e-60 235.3 134 78.4
Carub.0001s0507 Capsella rubella HOM05D006500 ORTHO05D008028 5.3e-60 234.6 152 71.1
arahy.Tifrunner.gnm1.ann1.A3K5YX Arachis hypogaea HOM05D006500 ORTHO05D008028 6.9e-60 234.2 153 73.9
arahy.Tifrunner.gnm1.ann1.SHKR8E Arachis hypogaea HOM05D006500 ORTHO05D008028 6.9e-60 234.2 153 73.9
CARHR005240 Cardamine hirsuta HOM05D006500 ORTHO05D008028 6.9e-60 234.2 147 73.5
Medtr4g087310 Medicago truncatula HOM05D006500 ORTHO05D008028 6.9e-60 234.2 161 69.6
Phvul.003G296700 Phaseolus vulgaris HOM05D006500 ORTHO05D008028 6.9e-60 234.2 144 76.4
AL1G15630 Arabidopsis lyrata HOM05D006500 ORTHO05D008028 9.0e-60 233.8 137 77.4
Glyma.02G137600 Glycine max HOM05D006500 ORTHO05D008028 9.0e-60 233.8 136 78.7
Gohir.A05G327700 Gossypium hirsutum HOM05D006500 ORTHO05D008028 9.0e-60 233.8 140 75.0
THA.LOC104800923 Tarenaya hassleriana HOM05D006500 ORTHO05D008028 9.0e-60 233.8 132 80.3
BcaC07g42119 Brassica carinata HOM05D006500 ORTHO05D008028 1.2e-59 233.4 147 72.8
Potri.013G126900 Populus trichocarpa HOM05D006500 ORTHO05D008028 1.2e-59 233.4 134 79.1
Sed0014008 Sechium edule HOM05D006500 ORTHO05D008028 1.2e-59 233.4 153 72.5
Cpa.g.sc9.364 Carica papaya HOM05D006500 ORTHO05D008028 1.5e-59 233.0 134 77.6
MELO3C022425.2 Cucumis melo HOM05D006500 ORTHO05D008028 1.5e-59 233.0 137 76.6
CsaV3_6G007030 Cucumis sativus L. HOM05D006500 ORTHO05D008028 2.0e-59 232.6 137 76.6
Lj4g0023361 Lotus japonicus HOM05D006500 ORTHO05D008028 2.0e-59 232.6 151 74.2
VMungo0251G2572 Vigna mungo HOM05D006500 ORTHO05D008028 2.0e-59 232.6 149 73.8
BcaC07g42115 Brassica carinata HOM05D006500 ORTHO05D008028 2.6e-59 232.3 134 78.4
BcaC07g42118 Brassica carinata HOM05D006500 ORTHO05D008028 2.6e-59 232.3 134 78.4
A09p67320 Brassica napus HOM05D006500 ORTHO05D008028 2.6e-59 232.3 134 78.4
C08p51630 Brassica napus HOM05D006500 ORTHO05D008028 2.6e-59 232.3 134 78.4
BolC8t52691H Brassica oleracea HOM05D006500 ORTHO05D008028 2.6e-59 232.3 134 78.4
Ciclev10022516m.g Citrus clementina HOM05D006500 ORTHO05D008028 2.6e-59 232.3 171 67.8
Hund03202 Selenicereus undatus HOM05D006500 ORTHO05D008028 3.4e-59 231.9 155 69.0
BraA09t42063Z Brassica rapa HOM05D006500 ORTHO05D008028 4.5e-59 231.5 134 78.4
Ca_18638_v3 Cicer arietinum L. HOM05D006500 ORTHO05D008028 4.5e-59 231.5 135 77.8
Glyma.07G207800 Glycine max HOM05D006500 ORTHO05D008028 4.5e-59 231.5 150 72.7
Gohir.D05G327900 Gossypium hirsutum HOM05D006500 ORTHO05D008028 4.5e-59 231.5 140 74.3
Gorai.009G351800 Gossypium raimondii HOM05D006500 ORTHO05D008028 4.5e-59 231.5 140 74.3
HanXRQChr14g0433631 Helianthus annuus HOM05D003327 ORTHO05D004535 5.9e-59 231.1 136 75.7
CANSAT56G1821 Cannabis sativa HOM05D006500 ORTHO05D008028 7.6e-59 230.7 155 71.6
Duzib151G0460 Durio zibethinus HOM05D006500 ORTHO05D008028 7.6e-59 230.7 133 77.4
Lsat_1_v5_gn_1_74920 Lactuca sativa HOM05D006500 ORTHO05D008028 7.6e-59 230.7 155 69.7
Sc25g0002800 Simmondsia chinensis HOM05D006500 ORTHO05D008028 7.6e-59 230.7 152 69.7
Aqoxy2G00124 Aquilegia oxysepala HOM05D006500 ORTHO05D008028 1.0e-58 230.3 147 72.8
Nn1g09644 Nelumbo nucifera HOM05D006500 ORTHO05D008028 1.0e-58 230.3 134 75.4
Atru.chr4.1419 Acer truncatum HOM05D006500 ORTHO05D008028 1.3e-58 229.9 137 75.9
Manes.11G129200 Manihot esculenta HOM05D006500 ORTHO05D008028 1.7e-58 229.6 134 76.9
Eucgr.A00110 Eucalyptus grandis HOM05D006500 ORTHO05D008028 2.2e-58 229.2 153 68.6
Eucgr.A00287 Eucalyptus grandis HOM05D006500 ORTHO05D008028 2.2e-58 229.2 153 68.6
BolC8t47013H Brassica oleracea HOM05D006500 ORTHO05D008028 3.2e-57 225.3 134 75.4
BraA08t35535Z Brassica rapa HOM05D006500 ORTHO05D008028 3.2e-57 225.3 152 69.1
BcaC07g36846 Brassica carinata HOM05D006500 ORTHO05D008028 4.2e-57 224.9 134 75.4
C08p02210 Brassica napus HOM05D006500 ORTHO05D008028 4.2e-57 224.9 134 75.4
BcaB03g13492 Brassica carinata HOM05D006500 ORTHO05D008028 1.2e-56 223.4 134 74.6
ATR0743G133 Amborella trichopoda HOM05D006500 ORTHO05D008028 2.1e-56 222.6 150 68.7
A08p36310 Brassica napus HOM05D006500 ORTHO05D008028 2.7e-56 222.2 152 68.4
HPP92_003580 Vanilla planifolia HOM05D006500 ORTHO05D008028 6.1e-56 221.1 133 75.9
PSO675G9108 Papaver somniferum HOM05D006500 ORTHO05D008028 7.9e-56 220.7 147 68.7
PSO732G0103 Papaver somniferum HOM05D006500 ORTHO05D008028 1.0e-55 220.3 147 68.7
ECA248G2222 Erigeron canadensis HOM05D000003 ORTHO05D008028 1.8e-55 219.5 137 70.8
FAN22G1805 Fragaria x ananassa HOM05D006500 ORTHO05D008028 5.1e-55 218.0 197 56.3
CDE04G3295 Ceratophyllum demersum HOM05D006500 ORTHO05D008028 1.5e-54 216.5 141 70.9
Zm00001eb144900 Zea mays HOM05D006500 ORTHO05D008028 2.5e-54 215.7 148 70.3
FAN07G0402 Fragaria x ananassa HOM05D006500 ORTHO05D008028 3.3e-54 215.3 197 56.3
FAN12G1276 Fragaria x ananassa HOM05D006500 ORTHO05D008028 3.3e-54 215.3 202 55.4
Os01g0894500 Oryza sativa ssp. japonica HOM05D006500 ORTHO05D008028 1.3e-53 213.4 133 72.2
PGR083G1262 Punica granatum HOM05D006500 ORTHO05D008028 2.4e-52 209.1 138 70.3
unitig_46.g18636 Utricularia gibba HOM05D006500 ORTHO05D008028 3.1e-52 208.8 151 67.5
Aa31LG1G8630 Aethionema arabicum HOM05D006500 ORTHO05D008028 1.2e-51 206.8 170 59.4
SEGI_07767 Sequoiadendron giganteum HOM05D006500 ORTHO05D008028 8.5e-50 200.7 144 63.2
Lj3A158T10 Lonicera japonica HOM05D006500 ORTHO05D008028 5.5e-49 198.0 135 68.9
MBI08_g33171_MAGBIO Magnolia biondii HOM05D006500 ORTHO05D008028 3.8e-42 175.3 102 79.4
BcaC07g42121 Brassica carinata HOM05D006500 ORTHO05D008028 5.0e-42 174.9 134 63.4
Pp3c14_2450 Physcomitrium patens HOM05D006500 ORTHO05D008028 7.2e-41 171.0 153 51.6
SMO119G0117 Selaginella moellendorffii HOM05D006500 ORTHO05D008028 2.1e-40 169.5 127 59.8
TPR.G23526 Trifolium pratense HOM05D006500 ORTHO05D008028 2.1e-40 169.5 97 78.4
Haze_01362 Corylus avellana HOM05D006500 ORTHO05D008028 1.0e-39 167.2 155 55.5
Nn1g09666 Nelumbo nucifera HOM05D006500 ORTHO05D008028 8.8e-31 137.5 82 72.0
SHI33478 Sapria himalayana HOM05D000105 ORTHO05D000023 3.0e-23 112.5 83 62.7
Ciclev10023175m.g Citrus clementina HOM05D006500 ORTHO05D008028 1.5e-22 110.2 71 70.4
CAN.G701.5 Capsicum annuum HOM05D006500 ORTHO05D008028 1.6e-19 100.1 86 58.1
Cre01.g038950 Chlamydomonas reinhardtii HOM05D006500 ORTHO05D008028 1.2e-14 84.0 150 34.0
CBR_g27901 Chara braunii HOM05D006500 ORTHO05D008028 4.3e-09 65.5 107 31.8
MBI08_g33170_MAGBIO Magnolia biondii HOM05D006500 ORTHO05D008028 7.5e-06 54.7 31 74.2


User provided reference genes

Program Settings