Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002539g0020 Nicotiana tabacum HOM05D004120 ORTHO05D004951 1.7e-146 522.7 267 100.0
Peaxi162Scf00045g00028 Petunia axillaris HOM05D004120 ORTHO05D004951 2.2e-106 389.4 255 81.2
PGSC0003DMG402001159 Solanum tuberosum HOM05D004120 ORTHO05D004951 2.4e-105 386.0 277 75.8
Sopen08g001030 Solanum pennellii HOM05D004120 ORTHO05D004951 9.2e-105 384.0 278 76.3
Solyc08g005010.4 Solanum lycopersicum HOM05D004120 ORTHO05D004951 2.7e-104 382.5 278 75.9
CAN.G1216.15 Capsicum annuum HOM05D004120 ORTHO05D004951 2.2e-98 362.8 264 76.9
Dinv28953 Davidia involucrata HOM05D004120 ORTHO05D004951 2.1e-88 329.7 277 67.5
Nitab4.5_0000804g0170 Nicotiana tabacum HOM05D004120 ORTHO05D004951 2.7e-88 329.3 238 76.9
DCAR_008274 Daucus carota HOM05D004120 ORTHO05D004951 1.1e-86 323.9 273 66.3
Nn1g00518 Nelumbo nucifera HOM05D004120 ORTHO05D004951 1.1e-84 317.4 257 68.5
Hma1.2p1_0585F.1_g183700 Hydrangea macrophylla HOM05D004120 ORTHO05D004951 5.2e-84 315.1 273 66.3
Nn6g33597 Nelumbo nucifera HOM05D004120 ORTHO05D004951 1.2e-83 313.9 274 65.3
TAR629G2715 Trochodendron aralioides HOM05D004120 ORTHO05D004951 2.6e-83 312.8 266 66.2
CSS0046330 Camellia sinensis var. sinensis HOM05D004120 ORTHO05D004951 5.8e-83 311.6 257 67.3
Dinv25212 Davidia involucrata HOM05D004120 ORTHO05D004951 7.6e-83 311.2 283 63.6
GSVIVG01013166001 Vitis vinifera HOM05D004120 ORTHO05D004951 7.6e-83 311.2 257 68.1
Eucgr.D02191 Eucalyptus grandis HOM05D004120 ORTHO05D004951 1.3e-82 310.5 248 68.5
Lsat_1_v5_gn_6_79560 Lactuca sativa HOM05D004120 ORTHO05D004951 2.2e-82 309.7 270 64.4
HanXRQChr03g0084021 Helianthus annuus HOM05D004120 ORTHO05D004951 1.1e-81 307.4 259 65.6
Sabra01G0111800 Salix brachista HOM05D004120 ORTHO05D004951 1.9e-81 306.6 270 65.2
Cfa012429 Carpinus fangiana HOM05D004120 ORTHO05D004951 2.4e-81 306.2 272 62.9
Cc08_g02620 Coffea canephora HOM05D004120 ORTHO05D004951 2.4e-81 306.2 282 62.8
Potri.001G143400 Populus trichocarpa HOM05D004120 ORTHO05D004951 3.2e-81 305.8 265 65.3
CiPaw.11G092700 Carya illinoinensis HOM05D004120 ORTHO05D004951 4.2e-81 305.4 272 66.2
Ciclev10031866m.g Citrus clementina HOM05D004120 ORTHO05D004951 5.4e-81 305.1 248 67.7
arahy.Tifrunner.gnm1.ann1.482M5A Arachis hypogaea HOM05D004120 ORTHO05D004951 7.1e-81 304.7 270 62.2
arahy.Tifrunner.gnm1.ann1.G7H05W Arachis hypogaea HOM05D004120 ORTHO05D004951 7.1e-81 304.7 270 62.2
MD00G1220600 Malus domestica HOM05D004120 ORTHO05D004951 9.3e-81 304.3 274 63.1
AUR62018721 Chenopodium quinoa HOM05D004120 ORTHO05D004951 2.1e-80 303.1 277 64.6
ECA240G4620 Erigeron canadensis HOM05D004120 ORTHO05D004951 4.6e-80 302.0 280 62.1
CANSAT21G2618 Cannabis sativa HOM05D004120 ORTHO05D004951 1.0e-79 300.8 274 63.9
Gohir.D08G177300 Gossypium hirsutum HOM05D004120 ORTHO05D004951 1.0e-79 300.8 253 67.2
Oeu053047.1 Olea europaea HOM05D004120 ORTHO05D004951 1.0e-79 300.8 271 63.8
Gohir.A08G156900 Gossypium hirsutum HOM05D004120 ORTHO05D004951 1.3e-79 300.4 253 68.0
Haze_08240 Corylus avellana HOM05D004120 ORTHO05D004951 2.3e-79 299.7 309 56.3
Rhsim11G0014500 Rhododendron simsii HOM05D004120 ORTHO05D004951 2.3e-79 299.7 257 65.0
TWI81G0459 Tripterygium wilfordii HOM05D004120 ORTHO05D004951 2.3e-79 299.7 248 69.0
EL10Ac5g12129 Beta vulgaris HOM05D004120 ORTHO05D004951 5.1e-79 298.5 276 63.8
Cpa.g.sc239.7 Carica papaya HOM05D004120 ORTHO05D004951 5.1e-79 298.5 247 68.4
VMungo1215G0016 Vigna mungo HOM05D004120 ORTHO05D004951 5.1e-79 298.5 267 66.3
COL.COLO4_17048 Corchorus olitorius HOM05D004120 ORTHO05D004951 1.1e-78 297.4 244 67.2
Prupe.5G038500 Prunus persica HOM05D004120 ORTHO05D004951 1.5e-78 297.0 275 62.9
PGR031G2717 Punica granatum HOM05D004120 ORTHO05D004951 1.5e-78 297.0 266 63.5
Hund14402 Selenicereus undatus HOM05D004120 ORTHO05D004951 1.5e-78 297.0 258 65.1
Atru.chr6.1717 Acer truncatum HOM05D004120 ORTHO05D004951 1.9e-78 296.6 254 65.7
QL12p005624 Quercus lobata HOM05D004120 ORTHO05D004951 1.9e-78 296.6 284 62.7
Phvul.002G007300 Phaseolus vulgaris HOM05D004120 ORTHO05D004951 2.5e-78 296.2 267 64.8
RcHm_v2.0_Chr7g0209431 Rosa chinensis HOM05D004120 ORTHO05D004951 3.3e-78 295.8 276 61.6
MSTRG.13757 Avicennia marina HOM05D004120 ORTHO05D004951 4.3e-78 295.4 274 61.3
Manes.17G013200 Manihot esculenta HOM05D004120 ORTHO05D004951 4.3e-78 295.4 276 62.0
Oeu028027.1 Olea europaea HOM05D004120 ORTHO05D004951 9.6e-78 294.3 243 67.1
Thecc.03G228600 Theobroma cacao HOM05D004120 ORTHO05D004951 9.6e-78 294.3 253 65.6
FvH4_5g21880 Fragaria vesca HOM05D004120 ORTHO05D004951 1.6e-77 293.5 250 66.0
CiPaw.12G063200 Carya illinoinensis HOM05D004120 ORTHO05D004951 2.1e-77 293.1 266 62.8
Gorai.004G185700 Gossypium raimondii HOM05D004120 ORTHO05D004951 2.1e-77 293.1 270 63.3
Sed0006792 Sechium edule HOM05D004120 ORTHO05D004951 2.1e-77 293.1 223 70.0
FAN18G3415 Fragaria x ananassa HOM05D004120 ORTHO05D004951 2.8e-77 292.7 250 66.0
FAN04G1856 Fragaria x ananassa HOM05D004120 ORTHO05D004951 6.2e-77 291.6 274 62.0
Duzib205G1837 Durio zibethinus HOM05D004120 ORTHO05D004951 1.8e-76 290.0 253 65.6
Glyma.01G198500 Glycine max HOM05D004120 ORTHO05D004951 1.8e-76 290.0 263 65.8
Aqoxy3G02384 Aquilegia oxysepala HOM05D004120 ORTHO05D004951 2.4e-76 289.7 265 63.4
ClCG10G001730 Citrullus lanatus HOM05D004120 ORTHO05D004951 2.4e-76 289.7 265 62.3
Migut.E00930 Erythranthe guttata HOM05D004120 ORTHO05D004951 1.2e-75 287.3 250 64.0
CDE03G0015 Ceratophyllum demersum HOM05D004120 ORTHO05D004951 2.0e-75 286.6 256 62.9
Duzib084G1060 Durio zibethinus HOM05D004120 ORTHO05D004951 2.0e-75 286.6 253 64.4
Ca_24652_v3 Cicer arietinum L. HOM05D004120 ORTHO05D004951 4.4e-75 285.4 261 62.1
CsaV3_3G001840 Cucumis sativus L. HOM05D004120 ORTHO05D004951 4.4e-75 285.4 245 65.7
Lalb_Chr16g0379111 Lupinus albus HOM05D004120 ORTHO05D004951 4.4e-75 285.4 270 60.4
MELO3C013859.2 Cucumis melo HOM05D004120 ORTHO05D004951 5.8e-75 285.0 265 62.3
Glyma.11G043400 Glycine max HOM05D004120 ORTHO05D004951 7.6e-75 284.6 267 62.9
AL716U10010 Arabidopsis lyrata HOM05D004120 ORTHO05D004951 2.2e-74 283.1 259 60.2
unitig_699.g19781 Utricularia gibba HOM05D004120 ORTHO05D004951 8.4e-74 281.2 254 63.0
Sc01g0007480 Simmondsia chinensis HOM05D004120 ORTHO05D004951 1.1e-73 280.8 235 67.7
AUR62007285 Chenopodium quinoa HOM05D004120 ORTHO05D004951 1.4e-73 280.4 255 65.1
THA.LOC104807951 Tarenaya hassleriana HOM05D004120 ORTHO05D004951 1.4e-73 280.4 269 57.6
PSO782G3668 Papaver somniferum HOM05D004120 ORTHO05D004951 2.4e-73 279.6 275 60.7
AL4G31300 Arabidopsis lyrata HOM05D004120 ORTHO05D004951 3.2e-73 279.3 269 58.0
Lalb_Chr05g0213941 Lupinus albus HOM05D004120 ORTHO05D004951 5.4e-73 278.5 256 62.1
Lj2g0014948 Lotus japonicus HOM05D004120 ORTHO05D004951 7.1e-73 278.1 251 62.5
PSO063G1634 Papaver somniferum HOM05D004120 ORTHO05D004951 2.1e-72 276.6 251 63.7
Psat2g173200 Pisum sativum HOM05D004120 ORTHO05D004951 6.0e-72 275.0 226 69.9
unitig_52.g17209 Utricularia gibba HOM05D004120 ORTHO05D004951 7.9e-72 274.6 256 61.7
BolC4t22936H Brassica oleracea HOM05D004120 ORTHO05D004951 1.0e-71 274.2 270 58.9
TPR.G7833 Trifolium pratense HOM05D004120 ORTHO05D004951 1.7e-71 273.5 248 64.5
ATR0049G040 Amborella trichopoda HOM05D004120 ORTHO05D004951 2.3e-71 273.1 245 60.4
AT2G35260 Arabidopsis thaliana HOM05D004120 ORTHO05D004951 2.3e-71 273.1 277 56.3
BraA05t19989Z Brassica rapa HOM05D004120 ORTHO05D004951 2.3e-71 273.1 269 57.2
BcaC02g11630 Brassica carinata HOM05D004120 ORTHO05D004951 3.0e-71 272.7 275 58.9
C04p12920 Brassica napus HOM05D004120 ORTHO05D004951 3.0e-71 272.7 275 58.9
Medtr5g014430 Medicago truncatula HOM05D004120 ORTHO05D004951 5.1e-71 271.9 253 63.6
A05p10510 Brassica napus HOM05D004120 ORTHO05D004951 1.5e-70 270.4 269 56.5
CARHR129420 Cardamine hirsuta HOM05D004120 ORTHO05D004951 1.5e-70 270.4 269 56.9
Sp4g17480 Schrenkiella parvula HOM05D004120 ORTHO05D004951 1.5e-70 270.4 278 57.2
BcaB02g09465 Brassica carinata HOM05D004120 ORTHO05D004951 2.5e-70 269.6 268 57.5
vmacro00332 Vaccinium macrocarpon HOM05D004120 ORTHO05D004951 2.5e-70 269.6 305 54.4
BraA03t11203Z Brassica rapa HOM05D004120 ORTHO05D004951 4.3e-70 268.9 269 56.5
A03p19500 Brassica napus HOM05D004120 ORTHO05D004951 5.6e-70 268.5 269 56.1
Thhalv10016805m.g Eutrema salsugineum HOM05D004120 ORTHO05D004951 1.6e-69 266.9 273 55.3
Aa31LG6G560 Aethionema arabicum HOM05D004120 ORTHO05D004951 2.8e-69 266.2 208 68.3
Carub.0004s1696 Capsella rubella HOM05D004120 ORTHO05D004951 4.8e-69 265.4 274 55.1
Thhalv10025287m.g Eutrema salsugineum HOM05D004120 ORTHO05D004951 4.8e-69 265.4 226 64.2
Ah.12g054990 Amaranthus hybridus HOM05D004120 ORTHO05D004951 6.2e-69 265.0 273 59.0
BcaC01g05734 Brassica carinata HOM05D004120 ORTHO05D004951 1.4e-68 263.8 248 59.3
C03p22720 Brassica napus HOM05D004120 ORTHO05D004951 1.4e-68 263.8 248 59.3
SGA_v2.0_scaffold54G19447 Striga asiatica HOM05D004120 ORTHO05D004951 1.4e-68 263.8 303 50.8
BolC3t14671H Brassica oleracea HOM05D004120 ORTHO05D004951 1.2e-67 260.8 248 58.9
THA.LOC104798329 Tarenaya hassleriana HOM05D004120 ORTHO05D004951 1.2e-67 260.8 280 54.6
Carub.0007s2352 Capsella rubella HOM05D004120 ORTHO05D004951 2.6e-67 259.6 225 61.8
ECA246G0968 Erigeron canadensis HOM05D004120 ORTHO05D004951 3.4e-67 259.2 252 59.9
Os03g0100030 Oryza sativa ssp. japonica HOM05D004120 ORTHO05D004951 3.4e-67 259.2 205 64.9
C07p49190 Brassica napus HOM05D004120 ORTHO05D004951 9.9e-67 257.7 228 61.0
BolC7t45429H Brassica oleracea HOM05D004120 ORTHO05D004951 9.9e-67 257.7 228 61.0
HPP92_022143 Vanilla planifolia HOM05D004120 ORTHO05D004951 1.7e-66 256.9 224 62.5
BcaNung00052 Brassica carinata HOM05D004120 ORTHO05D004951 2.9e-66 256.1 199 67.8
HPP92_022140 Vanilla planifolia HOM05D004120 ORTHO05D004951 3.8e-66 255.8 224 62.1
A03p50800 Brassica napus HOM05D004120 ORTHO05D004951 4.9e-66 255.4 200 66.5
BraA03t14169Z Brassica rapa HOM05D004120 ORTHO05D004951 4.9e-66 255.4 200 66.5
Zm00001eb426630 Zea mays HOM05D004120 ORTHO05D004951 6.4e-66 255.0 205 64.4
Sp7g16270 Schrenkiella parvula HOM05D004120 ORTHO05D004951 8.4e-66 254.6 199 67.3
Actinidia28172 Actinidia chinensis HOM05D004120 ORTHO05D004951 1.1e-65 254.2 163 82.2
FAN13G1981 Fragaria x ananassa HOM05D004120 ORTHO05D004951 1.4e-65 253.8 250 60.4
BcaC09g51598 Brassica carinata HOM05D004120 ORTHO05D004951 1.9e-65 253.4 199 67.3
C01p11590 Brassica napus HOM05D004120 ORTHO05D004951 1.9e-65 253.4 199 67.3
BolC1t01127H Brassica oleracea HOM05D004120 ORTHO05D004951 1.9e-65 253.4 199 67.3
BraA01t00933Z Brassica rapa HOM05D004120 ORTHO05D004951 1.9e-65 253.4 199 67.3
A01p09890 Brassica napus HOM05D004120 ORTHO05D004951 3.2e-65 252.7 199 67.3
CARHR224560 Cardamine hirsuta HOM05D004120 ORTHO05D004951 9.3e-65 251.1 295 51.5
AL7G36690 Arabidopsis lyrata HOM05D004120 ORTHO05D004951 1.6e-64 250.4 199 65.8
AT4G17840 Arabidopsis thaliana HOM05D004120 ORTHO05D004951 1.6e-64 250.4 199 65.8
FAN08G2335 Fragaria x ananassa HOM05D004120 ORTHO05D004951 2.7e-64 249.6 250 59.6
Aa31LG9G15290 Aethionema arabicum HOM05D004120 ORTHO05D004951 9.6e-62 241.1 297 49.5
MD06G1033000 Malus domestica HOM05D004120 ORTHO05D004951 3.4e-59 232.6 131 89.3
unitig_744.g24311 Utricularia gibba HOM05D004120 ORTHO05D004951 3.4e-59 232.6 276 52.5
SEGI_24472 Sequoiadendron giganteum HOM05D004120 ORTHO05D004951 1.1e-52 211.1 252 50.0
Actinidia25961 Actinidia chinensis HOM05D004120 ORTHO05D004951 6.9e-52 208.4 227 55.1
CDE06G0385 Ceratophyllum demersum HOM05D004120 ORTHO05D004951 1.3e-45 187.6 209 53.6
HanXRQChr05g0153901 Helianthus annuus HOM05D004120 ORTHO05D004951 2.0e-43 180.3 145 69.7
Pp3c10_10980 Physcomitrium patens HOM05D004120 ORTHO05D004951 2.5e-38 163.3 208 46.6
Mapoly0008s0099 Marchantia polymorpha HOM05D004120 ORTHO05D004951 8.2e-37 158.3 255 40.0
Pp3c14_25270 Physcomitrium patens HOM05D004120 ORTHO05D004951 1.4e-36 157.5 197 45.7
SMO356G0344 Selaginella moellendorffii HOM05D004120 ORTHO05D004951 1.8e-28 130.6 168 40.5
EL10Ac1g01819 Beta vulgaris HOM05D004120 ORTHO05D023811 2.0e-22 110.5 73 76.7
arahy.Tifrunner.gnm1.ann1.7CR4HZ Arachis hypogaea HOM05D004120 ORTHO05D004951 4.8e-21 105.9 100 58.0
arahy.Tifrunner.gnm1.ann1.K2V32T Arachis hypogaea HOM05D004120 ORTHO05D004951 1.4e-20 104.4 100 57.0
AagrBONN_evm.TU.Sc2ySwM_117.2801 Anthoceros agrestis HOM05D010715 ORTHO05D004951 3.1e-20 103.2 106 50.9
arahy.Tifrunner.gnm1.ann1.3C7WBJ Arachis hypogaea HOM05D004120 ORTHO05D004951 5.9e-19 99.0 56 85.7
arahy.Tifrunner.gnm1.ann1.JI8VIY Arachis hypogaea HOM05D004120 ORTHO05D021518 5.9e-19 99.0 57 84.2
arahy.Tifrunner.gnm1.ann1.WRTU1C Arachis hypogaea HOM05D004120 ORTHO05D004951 1.0e-18 98.2 100 55.0
arahy.Tifrunner.gnm1.ann1.RCE8PR Arachis hypogaea HOM05D004120 ORTHO05D004951 2.2e-18 97.1 100 56.0
AUR62039713 Chenopodium quinoa HOM05D004317 ORTHO05D005031 1.5e-17 94.4 55 81.8
arahy.Tifrunner.gnm1.ann1.NR0HVE Arachis hypogaea HOM05D004120 ORTHO05D021518 1.9e-17 94.0 57 82.5
CAN.G36.13 Capsicum annuum HOM05D004120 ORTHO05D004951 6.1e-16 89.0 53 77.4
CAN.G399.4 Capsicum annuum HOM05D004120 ORTHO05D004951 1.0e-15 88.2 55 81.8
AagrBONN_evm.TU.Sc2ySwM_117.3803 Anthoceros agrestis HOM05D004120 ORTHO05D004951 3.2e-09 66.6 106 38.7
arahy.Tifrunner.gnm1.ann1.H82JQN Arachis hypogaea HOM05D004120 ORTHO05D021518 4.7e-08 62.8 57 56.1
Aa31sc618G30 Aethionema arabicum HOM05D004120 ORTHO05D004951 1.4e-07 61.2 103 43.7
CBR_g56906 Chara braunii HOM05D004120 ORTHO05D004951 4.0e-07 59.7 56 50.0
RcHm_v2.0_Chr6g0284251 Rosa chinensis HOM05D004120 ORTHO05D004951 4.0e-07 59.7 63 50.8
A01p32880 Brassica napus HOM05D004120 ORTHO05D023811 5.2e-07 59.3 30 86.7
A06p35780 Brassica napus HOM05D004120 ORTHO05D023811 5.2e-07 59.3 30 86.7
BraA01t03409Z Brassica rapa HOM05D004120 ORTHO05D023811 5.2e-07 59.3 30 86.7
CBR_g19263 Chara braunii HOM05D004120 ORTHO05D004951 4.4e-06 56.2 78 42.3


User provided reference genes

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