Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002537g0050 Nicotiana tabacum HOM05D024896 ORTHO05D011265 3.4e-36 154.5 76 100.0
Peaxi162Scf00324g00715 Petunia axillaris HOM05D002484 ORTHO05D002541 1.9e-15 85.5 66 59.1
Peaxi162Scf00324g00722 Petunia axillaris HOM05D002484 ORTHO05D002541 1.6e-14 82.4 66 54.5
Peaxi162Scf00324g00714 Petunia axillaris HOM05D024896 ORTHO05D002541 2.4e-13 78.6 71 54.9
Peaxi162Scf00324g00716 Petunia axillaris HOM05D002484 ORTHO05D002541 6.8e-13 77.0 68 54.4
Solyc07g017570.2 Solanum lycopersicum HOM05D024896 ORTHO05D037726 5.8e-12 73.9 71 53.5
Sopen07g006380 Solanum pennellii HOM05D024896 ORTHO05D037726 5.8e-12 73.9 71 53.5
COL.COLO4_25964 Corchorus olitorius HOM05D002484 ORTHO05D002541 7.6e-12 73.6 67 52.2
Solyc07g009290.3 Solanum lycopersicum HOM05D024896 ORTHO05D037726 9.9e-12 73.2 69 56.5
CAN.G1126.34 Capsicum annuum HOM05D002484 ORTHO05D002541 1.1e-10 69.7 57 52.6
Solyc07g009260.3 Solanum lycopersicum HOM05D002484 ORTHO05D002541 1.9e-10 68.9 55 54.5
Solyc07g009080.4 Solanum lycopersicum HOM05D010303 ORTHO05D011265 2.4e-10 68.6 66 47.0
Sopen07g005040 Solanum pennellii HOM05D010303 ORTHO05D011265 5.4e-10 67.4 61 50.8
Solyc07g009090.4 Solanum lycopersicum HOM05D010303 ORTHO05D011265 6.0e-09 63.9 61 50.8
Sopen07g005050 Solanum pennellii HOM05D010303 ORTHO05D011265 6.0e-09 63.9 61 50.8
Solyc07g009100.3 Solanum lycopersicum HOM05D010303 ORTHO05D011265 7.8e-09 63.5 66 45.5
AT1G19610 Arabidopsis thaliana HOM05D002484 ORTHO05D002541 1.0e-08 63.2 60 48.3
Solyc07g009030.3 Solanum lycopersicum HOM05D010303 ORTHO05D011265 1.0e-08 63.2 66 45.5
Solyc07g009070.4 Solanum lycopersicum HOM05D010303 ORTHO05D011265 1.0e-08 63.2 66 45.5
PGSC0003DMG400028755 Solanum tuberosum HOM05D010303 ORTHO05D011265 1.0e-08 63.2 61 49.2
Solyc07g009020.2 Solanum lycopersicum HOM05D010303 ORTHO05D011265 1.3e-08 62.8 61 49.2
Solyc07g009040.3 Solanum lycopersicum HOM05D010303 ORTHO05D011265 1.3e-08 62.8 61 49.2
Solyc07g009060.4 Solanum lycopersicum HOM05D010303 ORTHO05D011265 1.3e-08 62.8 66 45.5
Sopen07g004990 Solanum pennellii HOM05D010303 ORTHO05D011265 1.3e-08 62.8 61 49.2
Sopen07g005030 Solanum pennellii HOM05D010303 ORTHO05D011265 1.7e-08 62.4 61 49.2
Sed0028225 Sechium edule HOM05D002484 ORTHO05D002541 3.0e-08 61.6 56 55.4
AL1G32330 Arabidopsis lyrata HOM05D002484 ORTHO05D002541 5.1e-08 60.8 60 46.7
Cc06_g22590 Coffea canephora HOM05D025805 ORTHO05D011265 5.1e-08 60.8 67 47.8
Solyc07g005630.3 Solanum lycopersicum HOM05D015613 ORTHO05D011265 5.1e-08 60.8 65 43.1
BcaB03g12908 Brassica carinata HOM05D002484 ORTHO05D002541 6.6e-08 60.5 60 45.0
Cc06_g22580 Coffea canephora HOM05D025805 ORTHO05D011265 6.6e-08 60.5 67 47.8
BraA08t34910Z Brassica rapa HOM05D002484 ORTHO05D002541 8.7e-08 60.1 60 45.0
Carub.0001s1915 Capsella rubella HOM05D002484 ORTHO05D002541 8.7e-08 60.1 60 46.7
Peaxi162Scf00003g00812 Petunia axillaris HOM05D010303 ORTHO05D011265 1.1e-07 59.7 62 48.4
BolC8t49576H Brassica oleracea HOM05D002484 ORTHO05D002541 1.5e-07 59.3 60 45.0
Cc00_g34420 Coffea canephora HOM05D025805 ORTHO05D011265 1.5e-07 59.3 67 46.3
Nitab4.5_0000023g0340 Nicotiana tabacum HOM05D002484 ORTHO05D002541 1.9e-07 58.9 66 50.0
Sp1g17450 Schrenkiella parvula HOM05D002484 ORTHO05D002541 1.9e-07 58.9 60 46.7
PGSC0003DMG400008516 Solanum tuberosum HOM05D002484 ORTHO05D002541 1.9e-07 58.9 56 51.8
HanXRQChr16g0505521 Helianthus annuus HOM05D002484 ORTHO05D002541 2.5e-07 58.5 66 42.4
PGSC0003DMG400011185 Solanum tuberosum HOM05D015613 ORTHO05D011265 2.5e-07 58.5 62 48.4
Thhalv10009242m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 3.3e-07 58.2 60 43.3
Nitab4.5_0000023g0290 Nicotiana tabacum HOM05D002484 ORTHO05D002541 3.3e-07 58.2 66 47.0
Solyc07g009050.3 Solanum lycopersicum HOM05D010303 ORTHO05D011265 3.3e-07 58.2 61 50.8
Actinidia27667 Actinidia chinensis HOM05D002484 ORTHO05D002541 4.3e-07 57.8 66 45.5
Ciclev10029712m.g Citrus clementina HOM05D002484 ORTHO05D002541 4.3e-07 57.8 70 42.9
Ciclev10029828m.g Citrus clementina HOM05D002484 ORTHO05D002541 4.3e-07 57.8 70 42.9
Cc00_g24240 Coffea canephora HOM05D025805 ORTHO05D011265 4.3e-07 57.8 67 44.8
TWI75G1456 Tripterygium wilfordii HOM05D002484 ORTHO05D002541 4.3e-07 57.8 65 43.1
DCAR_028974 Daucus carota HOM05D002484 ORTHO05D002541 5.6e-07 57.4 67 41.8
Lsat_1_v5_gn_5_65860 Lactuca sativa HOM05D002484 ORTHO05D002541 5.6e-07 57.4 56 42.9
HanXRQChr03g0074221 Helianthus annuus HOM05D002484 ORTHO05D002541 7.3e-07 57.0 42 52.4
HanXRQChr03g0074231 Helianthus annuus HOM05D002484 ORTHO05D002541 7.3e-07 57.0 42 52.4
HanXRQChr03g0074241 Helianthus annuus HOM05D002484 ORTHO05D002541 7.3e-07 57.0 42 52.4
Nitab4.5_0005600g0020 Nicotiana tabacum HOM05D002484 ORTHO05D002541 7.3e-07 57.0 59 49.2
Peaxi162Scf00047g01535 Petunia axillaris HOM05D010303 ORTHO05D011265 7.3e-07 57.0 63 47.6
FAN20G0586 Fragaria x ananassa HOM05D002484 ORTHO05D002541 9.6e-07 56.6 59 47.5
HanXRQChr16g0505511 Helianthus annuus HOM05D002484 ORTHO05D002541 9.6e-07 56.6 56 42.9
Prupe.8G071600 Prunus persica HOM05D002484 ORTHO05D002541 9.6e-07 56.6 69 44.9
Ciclev10030125m.g Citrus clementina HOM05D002484 ORTHO05D002541 1.2e-06 56.2 63 38.1
ECA236G2706 Erigeron canadensis HOM05D002484 ORTHO05D002541 1.2e-06 56.2 56 42.9
Thhalv10029442m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 1.2e-06 56.2 66 42.4
RcHm_v2.0_Chr6g0301471 Rosa chinensis HOM05D002484 ORTHO05D002541 1.2e-06 56.2 67 41.8
COL.COLO4_25966 Corchorus olitorius HOM05D002484 ORTHO05D002541 2.1e-06 55.5 59 37.3
CARHR247530 Cardamine hirsuta HOM05D002484 ORTHO05D002541 2.8e-06 55.1 67 44.8
PGR031G2841 Punica granatum HOM05D002484 ORTHO05D002541 2.8e-06 55.1 68 44.1
FAN20G1957 Fragaria x ananassa HOM05D002484 ORTHO05D002541 3.6e-06 54.7 52 44.2
Atru.chr5.3052 Acer truncatum HOM05D002484 ORTHO05D002541 4.7e-06 54.3 69 43.5
AL7G11150 Arabidopsis lyrata HOM05D002484 ORTHO05D002541 4.7e-06 54.3 66 43.9
COL.COLO4_25965 Corchorus olitorius HOM05D002484 ORTHO05D002541 6.2e-06 53.9 64 46.9
Peaxi162Scf00324g00717 Petunia axillaris HOM05D002484 ORTHO05D002541 6.2e-06 53.9 47 46.8
Thecc.02G082200 Theobroma cacao HOM05D002484 ORTHO05D002541 6.2e-06 53.9 66 39.4
Carub.0007s0108 Capsella rubella HOM05D002484 ORTHO05D002541 8.1e-06 53.5 60 40.0
DCAR_001564 Daucus carota HOM05D002484 ORTHO05D002541 8.1e-06 53.5 69 36.2
Peaxi162Scf00195g01222 Petunia axillaris HOM05D010303 ORTHO05D011265 8.1e-06 53.5 61 49.2


User provided reference genes

Program Settings