Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002527g0020 Nicotiana tabacum HOM05D006631 ORTHO05D008359 1.1e-153 546.6 275 100.0
Nitab4.5_0000307g0140 Nicotiana tabacum HOM05D006631 ORTHO05D008359 6.1e-136 487.6 270 92.2
PGSC0003DMG400000125 Solanum tuberosum HOM05D006631 ORTHO05D008359 1.2e-118 430.3 287 79.4
Sopen01g040000 Solanum pennellii HOM05D006631 ORTHO05D008359 2.0e-118 429.5 287 79.1
Solyc01g096240.4 Solanum lycopersicum HOM05D006631 ORTHO05D008359 4.4e-118 428.3 287 79.1
Dinv34238 Davidia involucrata HOM05D006631 ORTHO05D008359 4.0e-111 405.2 282 75.2
GSVIVG01027398001 Vitis vinifera HOM05D006631 ORTHO05D008359 3.4e-110 402.1 284 75.0
CSS0022670 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 2.2e-109 399.4 279 73.8
RcHm_v2.0_Chr1g0360621 Rosa chinensis HOM05D006631 ORTHO05D008359 2.2e-109 399.4 284 73.6
QL08p046273 Quercus lobata HOM05D006631 ORTHO05D008359 4.1e-108 395.2 281 75.4
Thecc.01G337000 Theobroma cacao HOM05D006631 ORTHO05D008359 7.0e-108 394.4 281 73.3
Lj9A602T26 Lonicera japonica HOM05D006631 ORTHO05D008359 1.6e-107 393.3 302 68.5
Psat3g001400 Pisum sativum HOM05D006631 ORTHO05D008359 1.6e-107 393.3 280 72.9
FAN06G3756 Fragaria x ananassa HOM05D006631 ORTHO05D008359 2.7e-107 392.5 284 73.2
MSTRG.4800 Avicennia marina HOM05D006631 ORTHO05D008359 1.0e-106 390.6 286 72.0
FvH4_7g17240 Fragaria vesca HOM05D006631 ORTHO05D008359 1.0e-106 390.6 284 72.9
TAR375G0108 Trochodendron aralioides HOM05D006631 ORTHO05D008359 1.0e-106 390.6 283 73.1
Gorai.007G111000 Gossypium raimondii HOM05D006631 ORTHO05D008359 2.9e-106 389.0 281 73.3
Duzib138G0935 Durio zibethinus HOM05D006631 ORTHO05D008359 3.8e-106 388.7 281 73.7
FAN06G3280 Fragaria x ananassa HOM05D006631 ORTHO05D008359 3.8e-106 388.7 284 72.9
Prupe.2G193800 Prunus persica HOM05D006631 ORTHO05D008359 8.6e-106 387.5 281 73.3
Actinidia28101 Actinidia chinensis HOM05D006631 ORTHO05D008359 1.5e-105 386.7 281 71.9
MD01G1086200 Malus domestica HOM05D006631 ORTHO05D008359 4.2e-105 385.2 279 72.8
Gohir.D11G103700 Gossypium hirsutum HOM05D006631 ORTHO05D008359 5.5e-105 384.8 281 72.2
Lj1g0014889 Lotus japonicus HOM05D006631 ORTHO05D008359 7.2e-105 384.4 283 71.4
Gohir.A11G099200 Gossypium hirsutum HOM05D006631 ORTHO05D008359 2.1e-104 382.9 281 71.9
Manes.05G019200 Manihot esculenta HOM05D006631 ORTHO05D008359 2.1e-104 382.9 281 72.6
Rhsim01G0176500 Rhododendron simsii HOM05D006631 ORTHO05D008359 2.1e-104 382.9 280 71.1
Atru.chr5.731 Acer truncatum HOM05D006631 ORTHO05D008359 3.6e-104 382.1 282 72.3
Cfa003762 Carpinus fangiana HOM05D006631 ORTHO05D008359 3.6e-104 382.1 282 72.3
Cpa.g.sc144.12 Carica papaya HOM05D006631 ORTHO05D008359 4.7e-104 381.7 275 71.6
Lalb_Chr19g0133561 Lupinus albus HOM05D006631 ORTHO05D008359 8.0e-104 380.9 283 70.7
Phvul.006G115700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 8.0e-104 380.9 290 67.6
THA.LOC104817387 Tarenaya hassleriana HOM05D006631 ORTHO05D008359 8.0e-104 380.9 284 69.4
Glyma.03G259400 Glycine max HOM05D006631 ORTHO05D008359 1.0e-103 380.6 281 70.1
CANSAT56G2365 Cannabis sativa HOM05D006631 ORTHO05D008359 1.8e-103 379.8 284 69.0
Potri.014G102400 Populus trichocarpa HOM05D006631 ORTHO05D008359 1.8e-103 379.8 284 71.8
Ca_09530_v3 Cicer arietinum L. HOM05D006631 ORTHO05D008359 3.0e-103 379.0 278 70.9
CiPaw.01G079400 Carya illinoinensis HOM05D006631 ORTHO05D008359 8.9e-103 377.5 277 71.1
Peaxi162Scf00767g00111 Petunia axillaris HOM05D006631 ORTHO05D008359 1.2e-102 377.1 201 90.5
SalBow5G1997 Salvia bowleyana HOM05D006631 ORTHO05D008359 5.7e-102 374.8 284 70.4
Glyma.19G258300 Glycine max HOM05D006631 ORTHO05D008359 7.5e-102 374.4 285 68.1
CsaV3_3G007830 Cucumis sativus L. HOM05D006631 ORTHO05D008359 2.9e-101 372.5 280 71.4
TWI59G0463 Tripterygium wilfordii HOM05D006631 ORTHO05D008359 2.9e-101 372.5 285 69.5
PGR031G0416 Punica granatum HOM05D006631 ORTHO05D008359 4.9e-101 371.7 277 69.0
Eucgr.D02642 Eucalyptus grandis HOM05D006631 ORTHO05D008359 1.1e-100 370.5 287 67.6
Medtr7g117970 Medicago truncatula HOM05D006631 ORTHO05D008359 1.1e-100 370.5 278 69.8
ClCG05G000610 Citrullus lanatus HOM05D006631 ORTHO05D008359 1.4e-100 370.2 279 70.3
COL.COLO4_06257 Corchorus olitorius HOM05D006631 ORTHO05D008359 1.8e-100 369.8 269 72.1
Nn1g00373 Nelumbo nucifera HOM05D006631 ORTHO05D008359 5.4e-100 368.2 284 70.4
PSO782G2421 Papaver somniferum HOM05D006631 ORTHO05D008359 7.0e-100 367.9 290 66.6
PSO063G1328 Papaver somniferum HOM05D006631 ORTHO05D008359 9.2e-100 367.5 292 66.1
CAN.G1415.2 Capsicum annuum HOM05D006631 ORTHO05D008359 3.5e-99 365.5 201 86.6
ECA240G4795 Erigeron canadensis HOM05D006631 ORTHO05D008359 3.5e-99 365.5 278 68.0
AUR62022720 Chenopodium quinoa HOM05D006631 ORTHO05D008359 5.9e-99 364.8 289 67.5
Ciclev10021628m.g Citrus clementina HOM05D006631 ORTHO05D008359 7.8e-99 364.4 282 67.7
Migut.N01525 Erythranthe guttata HOM05D006631 ORTHO05D008359 1.3e-98 363.6 304 65.5
Hund16731 Selenicereus undatus HOM05D006631 ORTHO05D008359 1.7e-98 363.2 277 67.9
MELO3C005999.2 Cucumis melo HOM05D006631 ORTHO05D008359 8.6e-98 360.9 309 65.7
AUR62004534 Chenopodium quinoa HOM05D006631 ORTHO05D008359 1.5e-97 360.1 286 66.4
TPR.G4790 Trifolium pratense HOM05D006631 ORTHO05D008359 1.9e-97 359.8 288 66.7
Aa31LG10G15890 Aethionema arabicum HOM05D006631 ORTHO05D008359 2.5e-97 359.4 277 67.5
Phvul.010G116700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 1.2e-96 357.1 283 66.4
FAN03G0022 Fragaria x ananassa HOM05D006631 ORTHO05D008359 1.4e-95 353.6 263 69.6
MBI04_g33414_MAGBIO Magnolia biondii HOM05D006631 ORTHO05D008359 1.8e-95 353.2 304 64.1
Sabra14G0075400 Salix brachista HOM05D006631 ORTHO05D008359 8.9e-95 350.9 221 78.3
arahy.Tifrunner.gnm1.ann1.588I57 Arachis hypogaea HOM05D006631 ORTHO05D008359 1.5e-94 350.1 278 66.5
FAN10G3243 Fragaria x ananassa HOM05D006631 ORTHO05D008359 2.0e-94 349.7 275 66.9
arahy.Tifrunner.gnm1.ann1.NC261Q Arachis hypogaea HOM05D006631 ORTHO05D008359 4.4e-94 348.6 277 65.7
FAN01G0947 Fragaria x ananassa HOM05D006631 ORTHO05D008359 4.4e-94 348.6 205 81.5
Lsat_1_v5_gn_3_141021 Lactuca sativa HOM05D006631 ORTHO05D008359 5.8e-94 348.2 279 67.4
MSTRG.28278 Avicennia marina HOM05D006631 ORTHO05D008359 9.8e-94 347.4 277 67.5
vmacro12589 Vaccinium macrocarpon HOM05D006631 ORTHO05D008359 2.2e-93 346.3 207 81.2
Haze_15698 Corylus avellana HOM05D006631 ORTHO05D008359 4.9e-93 345.1 201 83.1
AL5G44450 Arabidopsis lyrata HOM05D006631 ORTHO05D008359 1.2e-91 340.5 279 64.5
C08p36710 Brassica napus HOM05D006631 ORTHO05D008359 3.5e-91 339.0 285 64.6
BolC8t51253H Brassica oleracea HOM05D006631 ORTHO05D008359 3.5e-91 339.0 285 64.6
Ah.05g179220 Amaranthus hybridus HOM05D006631 ORTHO05D008359 6.0e-91 338.2 282 60.6
Glyma.16G021600 Glycine max HOM05D006631 ORTHO05D008359 7.8e-91 337.8 280 63.6
A09p53900 Brassica napus HOM05D006631 ORTHO05D008359 2.3e-90 336.3 230 72.6
BraA09t40806Z Brassica rapa HOM05D006631 ORTHO05D008359 2.3e-90 336.3 230 72.6
Thhalv10006166m.g Eutrema salsugineum HOM05D006631 ORTHO05D008359 3.9e-90 335.5 279 64.2
Carub.0005s2861 Capsella rubella HOM05D006631 ORTHO05D008359 6.6e-90 334.7 279 62.7
AT3G61870 Arabidopsis thaliana HOM05D006631 ORTHO05D008359 5.6e-89 331.6 280 62.9
CARHR172210 Cardamine hirsuta HOM05D006631 ORTHO05D008359 9.5e-89 330.9 280 64.6
Sp5g01490 Schrenkiella parvula HOM05D006631 ORTHO05D008359 2.1e-88 329.7 279 62.0
Sed0011774 Sechium edule HOM05D006631 ORTHO05D008359 2.1e-88 329.7 275 65.5
HanXRQChr03g0094051 Helianthus annuus HOM05D006631 ORTHO05D008359 3.6e-88 328.9 287 63.8
VMungo0540G1103 Vigna mungo HOM05D006631 ORTHO05D008359 4.7e-88 328.6 206 77.7
Sc23g0001960 Simmondsia chinensis HOM05D006631 ORTHO05D008359 6.2e-88 328.2 202 77.7
VMungo0331G0918 Vigna mungo HOM05D006631 ORTHO05D008359 2.0e-86 323.2 200 77.5
Oeu007870.1 Olea europaea HOM05D006631 ORTHO05D008359 2.6e-86 322.8 178 87.6
SEGI_25065 Sequoiadendron giganteum HOM05D006631 ORTHO05D008359 4.6e-83 312.0 236 66.9
Lalb_Chr17g0342841 Lupinus albus HOM05D006631 ORTHO05D008359 1.3e-82 310.5 283 58.7
HPP92_002500 Vanilla planifolia HOM05D006631 ORTHO05D008359 1.7e-82 310.1 291 58.8
CDE07G1250 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 3.9e-82 308.9 244 66.0
ATR0620G070 Amborella trichopoda HOM05D006631 ORTHO05D008359 9.5e-81 304.3 255 62.0
Os02g0122500 Oryza sativa ssp. japonica HOM05D006631 ORTHO05D008359 3.6e-80 302.4 215 70.2
FAN10G2512 Fragaria x ananassa HOM05D006631 ORTHO05D008359 5.8e-78 295.0 287 60.6
Mapoly0049s0137 Marchantia polymorpha HOM05D006631 ORTHO05D008359 2.9e-77 292.7 201 70.6
BcaC07g42601 Brassica carinata HOM05D006631 ORTHO05D008359 1.0e-74 284.3 279 58.1
SMO143G0155 Selaginella moellendorffii HOM05D006631 ORTHO05D008359 3.0e-74 282.7 200 68.0
Pp3c5_3210 Physcomitrium patens HOM05D006631 ORTHO05D008359 4.3e-73 278.9 243 60.9
DCAR_008654 Daucus carota HOM05D006631 ORTHO05D008359 4.9e-69 265.4 177 74.0
CBR_g37545 Chara braunii HOM05D006631 ORTHO05D008359 9.3e-68 261.2 195 66.7
SGA_v2.0_scaffold581G53044 Striga asiatica HOM05D006631 ORTHO05D008359 6.0e-67 258.5 157 79.0
MD07G1155100 Malus domestica HOM05D006631 ORTHO05D008359 2.3e-66 256.5 156 80.1
arahy.Tifrunner.gnm1.ann1.S1C8P4 Arachis hypogaea HOM05D006631 ORTHO05D008359 3.0e-66 256.1 288 53.1
EL10Ac1g00220 Beta vulgaris HOM05D006631 ORTHO05D008359 5.1e-66 255.4 220 59.5
Cc02_g39740 Coffea canephora HOM05D006631 ORTHO05D008359 2.8e-64 249.6 203 63.1
arahy.Tifrunner.gnm1.ann1.GG2XE6 Arachis hypogaea HOM05D006631 ORTHO05D008359 1.1e-63 247.7 240 59.2
MCO07G366 Micromonas commoda HOM05D006631 ORTHO05D008359 9.0e-63 244.6 284 48.9
Cre12.g519300 Chlamydomonas reinhardtii HOM05D006631 ORTHO05D008359 2.4e-60 236.5 227 58.1
CDE09G1080 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 4.8e-56 222.2 248 46.8
CSS0025910 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 3.5e-51 206.1 116 81.0
PRCOL_00004956 Prasinoderma coloniale HOM05D006631 ORTHO05D008359 3.5e-51 206.1 201 53.2
AagrBONN_evm.TU.Sc2ySwM_362.2495 Anthoceros agrestis HOM05D006631 ORTHO05D008359 1.5e-46 190.7 114 78.1
unitig_8.g3405 Utricularia gibba HOM05D006631 ORTHO05D008359 2.2e-45 186.8 181 60.8
TAR374G1086 Trochodendron aralioides HOM05D000482 ORTHO05D000349 5.9e-38 162.2 185 48.6
TAR374G0170 Trochodendron aralioides HOM05D000482 ORTHO05D000349 2.8e-24 116.7 68 77.9
TAR374G1450 Trochodendron aralioides HOM05D000482 ORTHO05D000349 4.8e-24 115.9 116 52.6
GSVIVG01001070001 Vitis vinifera HOM05D006631 ORTHO05D008359 7.5e-09 65.5 34 85.3
unitig_22.g6820 Utricularia gibba HOM05D006631 ORTHO05D008359 8.2e-08 62.0 61 55.7


User provided reference genes

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