Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002526g0090 Nicotiana tabacum HOM05D005443 ORTHO05D009021 1.8e-133 479.2 235 100.0
Nitab4.5_0000512g0150 Nicotiana tabacum HOM05D005443 ORTHO05D009021 2.7e-84 315.8 180 88.3
PGSC0003DMG400018348 Solanum tuberosum HOM05D005443 ORTHO05D009021 3.4e-71 272.3 183 77.0
CAN.G248.23 Capsicum annuum HOM05D005443 ORTHO05D009021 5.2e-43 178.7 117 79.5
Peaxi162Scf00132g00415 Petunia axillaris HOM05D005443 ORTHO05D009021 2.8e-41 172.9 110 81.8
Sopen07g028070 Solanum pennellii HOM05D005443 ORTHO05D009021 2.7e-39 166.4 110 80.9
TAR629G1996 Trochodendron aralioides HOM05D005443 ORTHO05D009021 4.5e-39 165.6 160 56.2
Cfa014595 Carpinus fangiana HOM05D005443 ORTHO05D009021 1.0e-38 164.5 152 55.3
Rhsim06G0144000 Rhododendron simsii HOM05D005443 ORTHO05D009021 1.7e-38 163.7 153 58.2
GSVIVG01020531001 Vitis vinifera HOM05D005443 ORTHO05D009021 5.0e-38 162.2 143 60.1
Cc05_g07040 Coffea canephora HOM05D005443 ORTHO05D009021 6.5e-38 161.8 185 46.5
CSS0011007 Camellia sinensis var. sinensis HOM05D005443 ORTHO05D009021 8.5e-38 161.4 153 56.9
CSS0037968 Camellia sinensis var. sinensis HOM05D005443 ORTHO05D009021 8.5e-38 161.4 153 56.9
Haze_13148 Corylus avellana HOM05D005443 ORTHO05D009021 1.1e-37 161.0 184 49.5
Actinidia11040 Actinidia chinensis HOM05D005443 ORTHO05D009021 1.5e-37 160.6 149 55.0
Prupe.3G135600 Prunus persica HOM05D005443 ORTHO05D009021 1.5e-37 160.6 142 56.3
SalBow7G3189 Salvia bowleyana HOM05D005443 ORTHO05D009021 2.5e-37 159.8 185 48.1
SalBow7G4211 Salvia bowleyana HOM05D005443 ORTHO05D009021 2.5e-37 159.8 185 48.1
QL08p038456 Quercus lobata HOM05D005443 ORTHO05D009021 2.1e-36 156.8 137 57.7
Manes.12G087400 Manihot esculenta HOM05D005443 ORTHO05D009021 1.0e-35 154.5 179 49.7
Duzib052G1076 Durio zibethinus HOM05D005443 ORTHO05D009021 1.8e-35 153.7 181 48.1
Hma1.2p1_1201F.1_g266680 Hydrangea macrophylla HOM05D005443 ORTHO05D009021 2.3e-35 153.3 162 51.9
Sabra19G0111200 Salix brachista HOM05D005443 ORTHO05D009021 4.0e-35 152.5 145 53.8
FAN02G0200 Fragaria x ananassa HOM05D005443 ORTHO05D009021 6.8e-35 151.8 211 41.7
RcHm_v2.0_Chr2g0126191 Rosa chinensis HOM05D005443 ORTHO05D009021 6.8e-35 151.8 142 53.5
MBI18_g16995_MAGBIO Magnolia biondii HOM05D005443 ORTHO05D009021 1.5e-34 150.6 166 50.6
FvH4_6g26140 Fragaria vesca HOM05D005443 ORTHO05D009021 2.6e-34 149.8 190 44.7
MD09G1249200 Malus domestica HOM05D005443 ORTHO05D009021 2.6e-34 149.8 142 52.8
Migut.H01082 Erythranthe guttata HOM05D005443 ORTHO05D009021 4.4e-34 149.1 164 53.0
vmacro12294 Vaccinium macrocarpon HOM05D005443 ORTHO05D009021 7.5e-34 148.3 127 63.0
CsaV3_7G024480 Cucumis sativus L. HOM05D005443 ORTHO05D009021 1.3e-33 147.5 208 39.4
Hma1.2p1_1201F.1_g266690 Hydrangea macrophylla HOM05D005443 ORTHO05D009021 3.7e-33 146.0 130 56.9
Atru.chr2.3463 Acer truncatum HOM05D005443 ORTHO05D009021 6.3e-33 145.2 131 58.0
Thecc.02G178000 Theobroma cacao HOM05D005443 ORTHO05D009021 8.3e-33 144.8 162 49.4
TWI75G0884 Tripterygium wilfordii HOM05D005443 ORTHO05D009021 8.3e-33 144.8 174 49.4
VMungo1127G1015 Vigna mungo HOM05D005443 ORTHO05D009021 1.4e-32 144.1 181 43.6
Gohir.D13G066100 Gossypium hirsutum HOM05D005443 ORTHO05D009021 4.1e-32 142.5 161 50.9
Gorai.013G075400 Gossypium raimondii HOM05D005443 ORTHO05D009021 5.4e-32 142.1 161 50.9
Carub.0003s3525 Capsella rubella HOM05D005443 ORTHO05D009021 9.1e-32 141.4 194 43.3
ClCG07G002990 Citrullus lanatus HOM05D000092 ORTHO05D009021 2.0e-31 140.2 160 46.2
PSO675G8511 Papaver somniferum HOM05D005443 ORTHO05D009021 2.7e-31 139.8 140 54.3
AL3G53840 Arabidopsis lyrata HOM05D005443 ORTHO05D009021 3.5e-31 139.4 175 47.4
Glyma.06G293500 Glycine max HOM05D005443 ORTHO05D009021 5.9e-31 138.7 146 49.3
Gohir.A13G055900 Gossypium hirsutum HOM05D005443 ORTHO05D009021 5.9e-31 138.7 157 50.3
PGR042G2153 Punica granatum HOM05D005443 ORTHO05D009021 1.0e-30 137.9 152 48.7
Sc21g0002690 Simmondsia chinensis HOM05D005443 ORTHO05D009021 1.3e-30 137.5 152 48.7
Dinv23652 Davidia involucrata HOM05D005443 ORTHO05D009021 1.7e-30 137.1 110 65.5
Phvul.011G114600 Phaseolus vulgaris HOM05D005443 ORTHO05D009021 1.7e-30 137.1 138 50.0
Lj3g0013365 Lotus japonicus HOM05D005443 ORTHO05D009021 2.9e-30 136.3 131 52.7
HanXRQChr17g0553531 Helianthus annuus HOM05D005443 ORTHO05D009021 5.0e-30 135.6 146 47.9
AT2G20725 Arabidopsis thaliana HOM05D005443 ORTHO05D009021 6.5e-30 135.2 155 49.0
SGA_v2.0_scaffold109G31118 Striga asiatica HOM05D005443 ORTHO05D009021 6.5e-30 135.2 129 53.5
BcaB03g16866 Brassica carinata HOM05D005443 ORTHO05D009021 1.9e-29 133.7 196 41.8
Lsat_1_v5_gn_8_133320 Lactuca sativa HOM05D005443 ORTHO05D009021 2.5e-29 133.3 140 49.3
Lalb_Chr19g0135291 Lupinus albus HOM05D005443 ORTHO05D009021 2.5e-29 133.3 142 48.6
Eucgr.A01810 Eucalyptus grandis HOM05D005443 ORTHO05D009021 5.5e-29 132.1 151 48.3
Thhalv10002053m.g Eutrema salsugineum HOM05D005443 ORTHO05D009021 2.1e-28 130.2 163 46.6
CiPaw.04G125200 Carya illinoinensis HOM05D005443 ORTHO05D009021 8.0e-28 128.3 145 46.9
arahy.Tifrunner.gnm1.ann1.Y6HWTN Arachis hypogaea HOM05D005443 ORTHO05D009021 1.8e-27 127.1 143 46.2
HPP92_025995 Vanilla planifolia HOM05D005443 ORTHO05D009021 5.2e-27 125.6 185 40.0
THA.LOC104814500 Tarenaya hassleriana HOM05D005443 ORTHO05D009021 6.8e-27 125.2 157 45.2
Ah.01g015220 Amaranthus hybridus HOM05D005443 ORTHO05D009021 1.2e-26 124.4 152 42.8
Oeu017969.1 Olea europaea HOM05D005443 ORTHO05D009021 1.5e-26 124.0 110 54.5
Aa31LG8G17770 Aethionema arabicum HOM05D005443 ORTHO05D009021 2.0e-26 123.6 146 45.2
A07p00040 Brassica napus HOM05D005443 ORTHO05D009021 3.4e-26 122.9 173 42.2
Sp3g33980 Schrenkiella parvula HOM05D005443 ORTHO05D009021 3.4e-26 122.9 161 45.3
BolC7t40469H Brassica oleracea HOM05D005443 ORTHO05D009021 4.4e-26 122.5 183 41.5
C07p00180 Brassica napus HOM05D005443 ORTHO05D009021 5.7e-26 122.1 182 41.8
Cfa014602 Carpinus fangiana HOM05D005443 ORTHO05D009021 9.8e-26 121.3 112 57.1
Aqoxy1G02515 Aquilegia oxysepala HOM05D005443 ORTHO05D009021 1.3e-25 120.9 121 52.1
CANSAT78G0275 Cannabis sativa HOM05D005443 ORTHO05D009021 1.7e-25 120.6 138 44.9
BraA07t27796Z Brassica rapa HOM05D005443 ORTHO05D009021 2.8e-25 119.8 182 40.1
ATR0680G174 Amborella trichopoda HOM05D005443 ORTHO05D009021 4.9e-25 119.0 126 47.6
Sabra19G0112500 Salix brachista HOM05D005443 ORTHO05D009021 1.4e-24 117.5 220 35.5
Ciclev10017817m.g Citrus clementina HOM05D005443 ORTHO05D009021 5.4e-24 115.5 137 46.7
Cpa.g.sc34.150 Carica papaya HOM05D005443 ORTHO05D009021 7.0e-24 115.2 167 45.5
MELO3C024064.2 Cucumis melo HOM05D005443 ORTHO05D009021 9.2e-24 114.8 161 39.1
Medtr0096s0020 Medicago truncatula HOM05D005443 ORTHO05D009021 1.2e-23 114.4 161 39.1
Sed0001067 Sechium edule HOM05D005443 ORTHO05D009021 5.9e-23 112.1 110 49.1
TPR.G21753 Trifolium pratense HOM05D005443 ORTHO05D009021 1.7e-22 110.5 156 39.7
CDE11G1041 Ceratophyllum demersum HOM05D005443 ORTHO05D004488 8.0e-20 101.7 134 41.8
Hund07945 Selenicereus undatus HOM05D005443 ORTHO05D009021 1.8e-19 100.5 143 39.9
Os07g0457550 Oryza sativa ssp. japonica HOM05D005443 ORTHO05D009021 6.8e-19 98.6 138 40.6
BcaC06g36763 Brassica carinata HOM05D005443 ORTHO05D009021 9.8e-18 94.7 107 49.5
BcaC06g36764 Brassica carinata HOM05D005443 ORTHO05D009021 9.8e-18 94.7 107 49.5
unitig_62.g23169 Utricularia gibba HOM05D005443 ORTHO05D009021 5.9e-15 85.5 141 35.5
Glyma.12G111866 Glycine max HOM05D005443 ORTHO05D009021 1.0e-14 84.7 77 54.5
Potri.019G101100 Populus trichocarpa HOM05D005443 ORTHO05D009021 3.9e-14 82.8 79 54.4
COL.COLO4_07390 Corchorus olitorius HOM05D005443 ORTHO05D009021 2.5e-13 80.1 85 50.6
Atru.chr6.3005 Acer truncatum HOM05D005443 ORTHO05D009021 3.3e-13 79.7 71 63.4
Nn1g04052 Nelumbo nucifera HOM05D005443 ORTHO05D009021 1.6e-12 77.4 81 50.6
DCAR_016519 Daucus carota HOM05D005443 ORTHO05D009021 3.1e-11 73.2 71 56.3
Atru.chr2.3477 Acer truncatum HOM05D005443 ORTHO05D009021 5.2e-11 72.4 73 58.9
EL10Ac9g20752 Beta vulgaris HOM05D005443 ORTHO05D009021 8.9e-11 71.6 70 47.1
Gohir.D10G119100 Gossypium hirsutum HOM05D005443 ORTHO05D009021 1.5e-10 70.9 77 53.2
Pp3c3_11680 Physcomitrium patens HOM05D005443 ORTHO05D009021 4.4e-10 69.3 145 33.8
CARHR111400 Cardamine hirsuta HOM05D005443 ORTHO05D009021 4.9e-09 65.9 82 51.2
ECA233G3734 Erigeron canadensis HOM05D005443 ORTHO05D009021 1.1e-08 64.7 70 51.4
EL10Ac9g20753 Beta vulgaris HOM05D005443 ORTHO05D009021 1.7e-06 57.4 77 41.6
Ca_25912_v3 Cicer arietinum L. HOM05D005443 ORTHO05D009021 3.9e-06 56.2 60 45.0
arahy.Tifrunner.gnm1.ann1.0NFG0V Arachis hypogaea HOM05D005443 ORTHO05D009021 6.6e-06 55.5 83 34.9


User provided reference genes

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