Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002526g0010 Nicotiana tabacum HOM05D000300 ORTHO05D018168 5.3e-66 254.2 128 100.0
Nitab4.5_0000512g0120 Nicotiana tabacum HOM05D000300 ORTHO05D000383 1.0e-48 196.8 124 82.3
PGSC0003DMG402018347 Solanum tuberosum HOM05D000300 ORTHO05D000383 1.7e-24 116.3 124 54.8
Solyc07g054090.3 Solanum lycopersicum HOM05D000300 ORTHO05D000383 7.2e-23 110.9 125 52.0
Sopen07g028030 Solanum pennellii HOM05D000300 ORTHO05D000383 7.2e-23 110.9 125 52.0
Sopen07g028040 Solanum pennellii HOM05D000300 ORTHO05D000383 6.3e-19 97.8 124 46.8
Solyc07g054110.2 Solanum lycopersicum HOM05D000300 ORTHO05D018168 1.1e-15 87.0 125 45.6
Peaxi162Scf00132g00232 Petunia axillaris HOM05D000300 ORTHO05D000383 1.9e-15 86.3 109 49.5
Nitab4.5_0010614g0020 Nicotiana tabacum HOM05D000300 ORTHO05D000383 1.4e-10 70.1 109 45.0
Nitab4.5_0009735g0020 Nicotiana tabacum HOM05D000300 ORTHO05D018168 1.6e-09 66.6 90 43.3
Dinv26428 Davidia involucrata HOM05D000300 ORTHO05D000383 5.9e-09 64.7 72 44.4
Actinidia39312 Actinidia chinensis HOM05D000300 ORTHO05D000383 1.0e-08 63.9 75 45.3
Lj3g0008346 Lotus japonicus HOM05D000300 ORTHO05D000383 1.3e-08 63.5 59 49.2
Actinidia30477 Actinidia chinensis HOM05D000300 ORTHO05D000383 2.2e-08 62.8 77 41.6
TAR627G0683 Trochodendron aralioides HOM05D000300 ORTHO05D000383 3.8e-08 62.0 77 39.0
Lsat_1_v5_gn_4_65741 Lactuca sativa HOM05D000300 ORTHO05D000383 6.5e-08 61.2 114 36.8
ClCG07G002970 Citrullus lanatus HOM05D000300 ORTHO05D000383 8.5e-08 60.8 74 45.9
CsaV3_7G004380 Cucumis sativus L. HOM05D000300 ORTHO05D000383 1.1e-07 60.5 76 43.4
Duzib132G0424 Durio zibethinus HOM05D000300 ORTHO05D000383 1.9e-07 59.7 100 36.0
Lj3g0005372 Lotus japonicus HOM05D000300 ORTHO05D000383 1.9e-07 59.7 58 48.3
CSS0038961 Camellia sinensis var. sinensis HOM05D000300 ORTHO05D000383 3.2e-07 58.9 68 42.6
Dinv23647 Davidia involucrata HOM05D000300 ORTHO05D000383 3.2e-07 58.9 71 38.0
Sed0017099 Sechium edule HOM05D000300 ORTHO05D000383 3.2e-07 58.9 59 45.8
Prupe.3G136900 Prunus persica HOM05D000300 ORTHO05D000383 4.2e-07 58.5 76 40.8
CSS0038865 Camellia sinensis var. sinensis HOM05D000300 ORTHO05D000383 7.2e-07 57.8 86 37.2
MELO3C018741.2 Cucumis melo HOM05D000300 ORTHO05D000383 7.2e-07 57.8 83 37.3
Dinv07554 Davidia involucrata HOM05D000300 ORTHO05D000383 7.2e-07 57.8 78 38.5
Cc05_g07080 Coffea canephora HOM05D000300 ORTHO05D000383 9.4e-07 57.4 65 43.1
MELO3C002597.2 Cucumis melo HOM05D000300 ORTHO05D000383 9.4e-07 57.4 71 42.3
vmacro07531 Vaccinium macrocarpon HOM05D000300 ORTHO05D000383 9.4e-07 57.4 60 48.3
Lj1A724G17 Lonicera japonica HOM05D000300 ORTHO05D000383 1.2e-06 57.0 62 43.5
Manes.12G084500 Manihot esculenta HOM05D000300 ORTHO05D000383 1.2e-06 57.0 64 45.3
Aqoxy4G00887 Aquilegia oxysepala HOM05D000300 ORTHO05D000383 1.6e-06 56.6 62 37.1
Sed0022098 Sechium edule HOM05D000300 ORTHO05D000383 1.6e-06 56.6 59 45.8
Actinidia03955 Actinidia chinensis HOM05D000300 ORTHO05D000383 2.1e-06 56.2 67 43.3
Rhsim03G0056900 Rhododendron simsii HOM05D000300 ORTHO05D000383 2.1e-06 56.2 62 46.8
Actinidia05627 Actinidia chinensis HOM05D000300 ORTHO05D000383 3.6e-06 55.5 54 42.6
ClCG03G005990 Citrullus lanatus HOM05D000300 ORTHO05D000383 3.6e-06 55.5 55 47.3
ECA234G4398 Erigeron canadensis HOM05D000300 ORTHO05D000383 3.6e-06 55.5 71 39.4
CSS0029523 Camellia sinensis var. sinensis HOM05D000300 ORTHO05D000383 4.7e-06 55.1 81 34.6
CAN.G413.26 Capsicum annuum HOM05D000300 ORTHO05D000383 4.7e-06 55.1 54 42.6
Sed0023860 Sechium edule HOM05D000300 ORTHO05D000383 4.7e-06 55.1 65 43.1
CSS0000289 Camellia sinensis var. sinensis HOM05D000300 ORTHO05D000383 6.1e-06 54.7 61 41.0
CSS0011376 Camellia sinensis var. sinensis HOM05D000300 ORTHO05D000383 6.1e-06 54.7 61 41.0
Cpa.g.sc80.50 Carica papaya HOM05D000300 ORTHO05D000383 6.1e-06 54.7 95 35.8
CiPaw.10G047800 Carya illinoinensis HOM05D000300 ORTHO05D000383 6.1e-06 54.7 75 34.7
THA.LOC104824703 Tarenaya hassleriana HOM05D000300 ORTHO05D000383 6.1e-06 54.7 57 43.9
CiPaw.03G175900 Carya illinoinensis HOM05D000300 ORTHO05D000383 8.0e-06 54.3 65 36.9
Hma1.2p1_0304F.1_g119170 Hydrangea macrophylla HOM05D000300 ORTHO05D000383 8.0e-06 54.3 63 44.4
Medtr8g465890 Medicago truncatula HOM05D000300 ORTHO05D000383 8.0e-06 54.3 59 40.7
Sc07g0007900 Simmondsia chinensis HOM05D000300 ORTHO05D000383 8.0e-06 54.3 79 36.7


User provided reference genes

Program Settings