Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002524g0010 Nicotiana tabacum HOM05D002510 ORTHO05D006928 5.5e-161 570.9 278 100.0
Nitab4.5_0001053g0060 Nicotiana tabacum HOM05D002510 ORTHO05D006928 7.7e-155 550.4 278 96.0
CAN.G131.8 Capsicum annuum HOM05D002510 ORTHO05D006928 4.0e-135 485.0 278 86.3
PGSC0003DMG400033889 Solanum tuberosum HOM05D002510 ORTHO05D006928 1.5e-129 466.5 256 89.5
Peaxi162Scf01719g00013 Petunia axillaris HOM05D002510 ORTHO05D006928 1.5e-110 403.3 281 74.7
Oeu031347.1 Olea europaea HOM05D002510 ORTHO05D006928 3.4e-110 402.1 276 71.7
Eucgr.G02836 Eucalyptus grandis HOM05D002510 ORTHO05D006928 1.3e-109 400.2 275 70.2
DCAR_019102 Daucus carota HOM05D002510 ORTHO05D006928 1.1e-108 397.1 259 72.6
Potri.008G039300 Populus trichocarpa HOM05D002510 ORTHO05D006928 2.4e-108 396.0 282 69.1
Dinv31320 Davidia involucrata HOM05D002510 ORTHO05D006928 2.7e-107 392.5 276 69.2
Cc02_g11320 Coffea canephora HOM05D002510 ORTHO05D006928 8.7e-106 387.5 265 70.6
Glyma.20G179800 Glycine max HOM05D002510 ORTHO05D006928 1.1e-105 387.1 278 68.7
Prupe.2G213200 Prunus persica HOM05D002510 ORTHO05D006928 1.1e-105 387.1 225 78.2
GSVIVG01016268001 Vitis vinifera HOM05D002510 ORTHO05D006928 1.1e-105 387.1 246 73.2
FAN01G2940 Fragaria x ananassa HOM05D002510 ORTHO05D007210 3.3e-105 385.6 283 65.7
Glyma.10G210800 Glycine max HOM05D002510 ORTHO05D006928 3.3e-105 385.6 278 67.6
Lj5g0027397 Lotus japonicus HOM05D002510 ORTHO05D006928 3.3e-105 385.6 262 70.2
Thecc.10G074800 Theobroma cacao HOM05D002510 ORTHO05D006928 4.3e-105 385.2 247 73.7
Haze_16887 Corylus avellana HOM05D002510 ORTHO05D006928 5.6e-105 384.8 263 70.3
FAN06G0282 Fragaria x ananassa HOM05D002510 ORTHO05D006928 5.6e-105 384.8 285 64.6
MD07G1174400 Malus domestica HOM05D002510 ORTHO05D006928 5.6e-105 384.8 292 65.8
Duzib114G0372 Durio zibethinus HOM05D002510 ORTHO05D006928 9.6e-105 384.0 279 67.0
RcHm_v2.0_Chr1g0363321 Rosa chinensis HOM05D002510 ORTHO05D006928 9.6e-105 384.0 278 67.6
FvH4_7g19440 Fragaria vesca HOM05D002510 ORTHO05D006928 2.1e-104 382.9 285 64.2
FAN03G1741 Fragaria x ananassa HOM05D002510 ORTHO05D006928 2.1e-104 382.9 279 66.3
Phvul.007G094800 Phaseolus vulgaris HOM05D002510 ORTHO05D006928 2.1e-104 382.9 278 67.6
arahy.Tifrunner.gnm1.ann1.D0MVTX Arachis hypogaea HOM05D002510 ORTHO05D006928 2.8e-104 382.5 258 70.9
Duzib128G0305 Durio zibethinus HOM05D002510 ORTHO05D006928 2.8e-104 382.5 238 73.9
CiPaw.01G272400 Carya illinoinensis HOM05D002510 ORTHO05D006928 8.1e-104 380.9 284 66.2
Actinidia06769 Actinidia chinensis HOM05D002510 ORTHO05D006928 1.1e-103 380.6 280 67.5
Manes.07G100200 Manihot esculenta HOM05D002510 ORTHO05D006928 1.1e-103 380.6 224 76.8
Psat6g183480 Pisum sativum HOM05D002510 ORTHO05D006928 1.1e-103 380.6 227 76.2
arahy.Tifrunner.gnm1.ann1.B5KM0B Arachis hypogaea HOM05D002510 ORTHO05D006928 1.4e-103 380.2 277 68.2
CSS0017911 Camellia sinensis var. sinensis HOM05D002510 ORTHO05D006928 1.4e-103 380.2 222 78.8
Lj1C913T4 Lonicera japonica HOM05D002510 ORTHO05D006928 1.4e-103 380.2 284 65.5
MD01G1108300 Malus domestica HOM05D002510 ORTHO05D006928 1.4e-103 380.2 290 65.5
QL08p055746 Quercus lobata HOM05D002510 ORTHO05D006928 1.4e-103 380.2 246 72.8
Gohir.A10G205600 Gossypium hirsutum HOM05D002510 ORTHO05D006928 2.4e-103 379.4 232 75.9
Ca_10569_v3 Cicer arietinum L. HOM05D002800 ORTHO05D008563 3.1e-103 379.0 223 77.6
HanXRQChr14g0456861 Helianthus annuus HOM05D002510 ORTHO05D006928 3.1e-103 379.0 277 65.0
Medtr1g095000 Medicago truncatula HOM05D002510 ORTHO05D006928 3.1e-103 379.0 236 74.6
MSTRG.9172 Avicennia marina HOM05D002510 ORTHO05D006928 4.0e-103 378.6 242 74.0
FAN10G3768 Fragaria x ananassa HOM05D002510 ORTHO05D007210 4.0e-103 378.6 285 63.9
Sabra08G0027000 Salix brachista HOM05D002510 ORTHO05D006928 6.9e-103 377.9 223 78.0
Lalb_Chr02g0142201 Lupinus albus HOM05D002510 ORTHO05D006928 9.0e-103 377.5 279 66.3
FAN10G0968 Fragaria x ananassa HOM05D002510 ORTHO05D007210 1.2e-102 377.1 289 63.7
MELO3C019798.2 Cucumis melo HOM05D002510 ORTHO05D006928 2.0e-102 376.3 235 73.2
Lsat_1_v5_gn_2_112320 Lactuca sativa HOM05D002510 ORTHO05D006928 2.6e-102 375.9 279 64.2
Sc20g0001820 Simmondsia chinensis HOM05D002510 ORTHO05D006928 2.6e-102 375.9 283 64.0
CsaV3_6G036450 Cucumis sativus L. HOM05D002510 ORTHO05D006928 3.4e-102 375.6 233 73.8
PGR142G1169 Punica granatum HOM05D002510 ORTHO05D006928 4.4e-102 375.2 275 65.8
ClCG08G007520 Citrullus lanatus HOM05D002510 ORTHO05D006928 7.6e-102 374.4 235 73.2
EL10Ac3g05855 Beta vulgaris HOM05D002510 ORTHO05D006928 1.4e-100 370.2 275 63.6
Sed0007153 Sechium edule HOM05D002510 ORTHO05D006928 1.9e-100 369.8 231 74.0
Hund12054 Selenicereus undatus HOM05D002510 ORTHO05D006928 2.4e-100 369.4 241 69.3
Migut.F01984 Erythranthe guttata HOM05D002510 ORTHO05D006928 4.2e-100 368.6 272 65.4
Gorai.011G239300 Gossypium raimondii HOM05D002510 ORTHO05D006928 7.1e-100 367.9 244 71.7
Potri.010G222900 Populus trichocarpa HOM05D002510 ORTHO05D006928 9.3e-100 367.5 266 66.9
Lalb_Chr06g0162351 Lupinus albus HOM05D002510 ORTHO05D006928 1.2e-99 367.1 235 73.6
THA.LOC104827063 Tarenaya hassleriana HOM05D002510 ORTHO05D006928 7.8e-99 364.4 242 70.7
TWI15G0405 Tripterygium wilfordii HOM05D002510 ORTHO05D006928 7.8e-99 364.4 277 65.3
TAR369G0428 Trochodendron aralioides HOM05D002510 ORTHO05D006928 5.1e-98 361.7 238 70.6
Atru.chr12.758 Acer truncatum HOM05D002510 ORTHO05D006928 8.7e-98 360.9 234 72.6
Gohir.D10G213800 Gossypium hirsutum HOM05D002510 ORTHO05D006928 8.7e-98 360.9 221 75.1
Nn2g10810 Nelumbo nucifera HOM05D002510 ORTHO05D006928 7.3e-97 357.8 222 74.3
Actinidia38854 Actinidia chinensis HOM05D002510 ORTHO05D006928 9.6e-97 357.5 284 62.3
Ciclev10032329m.g Citrus clementina HOM05D002510 ORTHO05D006928 9.6e-97 357.5 229 71.6
Thhalv10017009m.g Eutrema salsugineum HOM05D002510 ORTHO05D006928 9.6e-97 357.5 286 62.6
AL4G36300 Arabidopsis lyrata HOM05D002510 ORTHO05D006928 1.4e-95 353.6 281 63.3
Ah.10g032650 Amaranthus hybridus HOM05D002510 ORTHO05D006928 2.4e-95 352.8 221 72.4
Sp4g21360 Schrenkiella parvula HOM05D002510 ORTHO05D006928 4.0e-95 352.1 243 68.7
Carub.0004s2104 Capsella rubella HOM05D002510 ORTHO05D006928 6.9e-95 351.3 286 60.5
AUR62037755 Chenopodium quinoa HOM05D002510 ORTHO05D006928 9.0e-95 350.9 243 68.7
BolC4t28203H Brassica oleracea HOM05D002510 ORTHO05D006928 1.2e-94 350.5 281 62.3
Sabra10G0172300 Salix brachista HOM05D002510 ORTHO05D006928 1.5e-94 350.1 220 72.7
TAR623G0044 Trochodendron aralioides HOM05D002510 ORTHO05D006928 2.0e-94 349.7 284 61.3
AUR62018249 Chenopodium quinoa HOM05D002510 ORTHO05D006928 2.6e-94 349.4 286 61.5
BcaC02g12914 Brassica carinata HOM05D002510 ORTHO05D006928 3.4e-94 349.0 280 62.9
AT2G39000 Arabidopsis thaliana HOM05D002510 ORTHO05D006928 5.8e-94 348.2 234 69.2
C04p67010 Brassica napus HOM05D002510 ORTHO05D006928 5.8e-94 348.2 280 62.5
Aqoxy1G01228 Aquilegia oxysepala HOM05D002510 ORTHO05D006928 1.3e-93 347.1 241 67.6
CSS0041581 Camellia sinensis var. sinensis HOM05D002510 ORTHO05D006928 1.7e-93 346.7 254 65.4
CARHR133780 Cardamine hirsuta HOM05D002510 ORTHO05D006928 6.4e-93 344.7 286 60.8
BraA04t18437Z Brassica rapa HOM05D002510 ORTHO05D006928 1.9e-92 343.2 281 61.6
Lj3g0006441 Lotus japonicus HOM05D002510 ORTHO05D006928 4.2e-92 342.0 222 72.5
CSS0006577 Camellia sinensis var. sinensis HOM05D002510 ORTHO05D006928 9.3e-92 340.9 254 64.6
PSO063G7611 Papaver somniferum HOM05D002510 ORTHO05D006928 9.3e-92 340.9 238 66.0
PSO339G5277 Papaver somniferum HOM05D002510 ORTHO05D006928 4.6e-91 338.6 238 66.0
Glyma.02G074000 Glycine max HOM05D002510 ORTHO05D006928 5.1e-90 335.1 257 66.1
Rhsim03G0120400 Rhododendron simsii HOM05D002510 ORTHO05D006928 8.7e-90 334.3 223 71.7
A04p29730 Brassica napus HOM05D002510 ORTHO05D006928 7.4e-89 331.3 304 57.2
vmacro04869 Vaccinium macrocarpon HOM05D002510 ORTHO05D006928 1.1e-87 327.4 278 59.7
TPR.G1934 Trifolium pratense HOM05D002510 ORTHO05D006928 2.0e-86 323.2 248 64.1
Phvul.004G083200 Phaseolus vulgaris HOM05D002510 ORTHO05D006928 1.7e-85 320.1 253 63.2
Migut.F01753 Erythranthe guttata HOM05D002510 ORTHO05D006928 2.2e-85 319.7 261 60.9
SGA_v2.0_scaffold62G21410 Striga asiatica HOM05D002510 ORTHO05D006928 1.1e-84 317.4 206 71.8
Lalb_Chr03g0035921 Lupinus albus HOM05D002510 ORTHO05D006928 1.4e-84 317.0 230 63.9
VMungo1197G0001 Vigna mungo HOM05D002510 ORTHO05D006928 5.5e-84 315.1 244 63.1
SalBow4G2249 Salvia bowleyana HOM05D002510 ORTHO05D006928 1.3e-82 310.5 236 65.3
ATR0048G011 Amborella trichopoda HOM05D002510 ORTHO05D006928 1.9e-81 306.6 226 62.4
ECA238G3090 Erigeron canadensis HOM05D002510 ORTHO05D006928 5.6e-81 305.1 254 57.5
CDE04G1444 Ceratophyllum demersum HOM05D002510 ORTHO05D006928 1.3e-80 303.9 223 65.0
Lj3g0019343 Lotus japonicus HOM05D002510 ORTHO05D006928 6.2e-80 301.6 240 62.9
HPP92_014717 Vanilla planifolia HOM05D002510 ORTHO05D006928 1.4e-79 300.4 221 62.0
VMungo0464G1224 Vigna mungo HOM05D002510 ORTHO05D006928 1.3e-77 293.9 260 60.4
Dinv36437 Davidia involucrata HOM05D002510 ORTHO05D006928 9.3e-76 287.7 231 64.1
arahy.Tifrunner.gnm1.ann1.DB5KD4 Arachis hypogaea HOM05D002510 ORTHO05D006928 1.6e-75 287.0 255 58.4
arahy.Tifrunner.gnm1.ann1.L5PTYD Arachis hypogaea HOM05D002510 ORTHO05D006928 6.0e-75 285.0 255 58.0
Cpa.g.sc53.85 Carica papaya HOM05D002510 ORTHO05D006928 3.9e-74 282.3 173 75.1
Os02g0806000 Oryza sativa ssp. japonica HOM05D002510 ORTHO05D006928 1.5e-73 280.4 231 56.7
unitig_88.g27817 Utricularia gibba HOM05D002510 ORTHO05D006928 7.4e-73 278.1 220 61.8
Gohir.D10G213900 Gossypium hirsutum HOM05D002510 ORTHO05D006928 4.8e-72 275.4 164 77.4
Atru.chr12.782 Acer truncatum HOM05D002510 ORTHO05D006928 5.3e-71 271.9 173 73.4
SalBow3G0053 Salvia bowleyana HOM05D002510 ORTHO05D006928 7.7e-70 268.1 164 73.2
Gohir.A10G205500 Gossypium hirsutum HOM05D002510 ORTHO05D006928 1.9e-68 263.5 167 74.3
CAN.G790.5 Capsicum annuum HOM05D002510 ORTHO05D006928 9.4e-68 261.2 146 86.3
SEGI_15474 Sequoiadendron giganteum HOM05D002510 ORTHO05D006928 6.1e-67 258.5 206 58.7
Oeu014386.1 Olea europaea HOM05D002510 ORTHO05D006928 1.1e-63 247.7 164 69.5
Sopen04g011630 Solanum pennellii HOM05D002510 ORTHO05D006928 4.1e-63 245.7 149 80.5
Solyc04g025240.2 Solanum lycopersicum HOM05D002510 ORTHO05D006928 7.9e-59 231.5 155 72.9
CDE06G2540 Ceratophyllum demersum HOM05D002510 ORTHO05D006928 4.5e-54 215.7 187 58.3
Aa31LG5G20680 Aethionema arabicum HOM05D002510 ORTHO05D006928 2.9e-53 213.0 131 72.5
vmacro07070 Vaccinium macrocarpon HOM05D002510 ORTHO05D006928 1.6e-51 207.2 190 60.0
Mapoly0033s0159 Marchantia polymorpha HOM05D002510 ORTHO05D006928 2.2e-48 196.8 215 45.6
SMO134G0014 Selaginella moellendorffii HOM05D002510 ORTHO05D006928 1.1e-44 184.5 210 46.7
Glyma.16G155400 Glycine max HOM05D002510 ORTHO05D006928 3.6e-43 179.5 179 55.3
Lj2g0015916 Lotus japonicus HOM05D002510 ORTHO05D006928 2.8e-40 169.9 166 57.2
Zm00001eb172140 Zea mays HOM05D002510 ORTHO05D006928 3.1e-39 166.4 133 60.2
Solyc04g025230.1 Solanum lycopersicum HOM05D002510 ORTHO05D006928 2.7e-38 163.3 93 82.8
Haze_18780 Corylus avellana HOM05D000278 ORTHO05D005754 4.7e-27 125.9 131 50.4
Ciclev10024578m.g Citrus clementina HOM05D002510 ORTHO05D006928 7.0e-23 112.1 90 55.6
AagrBONN_evm.TU.Sc2ySwM_117.96 Anthoceros agrestis HOM05D000001 ORTHO05D000003 4.3e-20 102.8 127 46.5
Nn3g20716 Nelumbo nucifera HOM05D002510 ORTHO05D006928 6.8e-18 95.5 133 43.6
Actinidia32448 Actinidia chinensis HOM05D002510 ORTHO05D006928 2.6e-17 93.6 63 65.1
PRCOL_00005349 Prasinoderma coloniale HOM05D002510 ORTHO05D006928 1.9e-12 77.4 85 50.6
Cre16.g662650 Chlamydomonas reinhardtii HOM05D002510 ORTHO05D006928 3.3e-12 76.6 119 37.0
A03p21800 Brassica napus HOM05D002510 ORTHO05D006928 2.6e-09 67.0 111 36.9
MCO13G231 Micromonas commoda HOM05D005733 ORTHO05D006928 3.7e-08 63.2 87 37.9
Actinidia37356 Actinidia chinensis HOM05D002510 ORTHO05D006928 3.2e-07 60.1 54 55.6
PRCOL_00000981 Prasinoderma coloniale HOM05D006270 ORTHO05D007755 7.8e-06 55.5 66 40.9


User provided reference genes

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