Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002522g0060 Nicotiana tabacum HOM05D007670 ORTHO05D009646 0.0e+00 1210.7 655 100.0
Nitab4.5_0008913g0020 Nicotiana tabacum HOM05D007670 ORTHO05D009646 0.0e+00 1101.7 659 92.0
PGSC0003DMG400018192 Solanum tuberosum HOM05D007670 ORTHO05D009646 3.1e-287 991.5 657 84.8
Sopen03g031210 Solanum pennellii HOM05D007670 ORTHO05D009646 1.5e-286 989.2 660 84.1
Cc04_g11380 Coffea canephora HOM05D007670 ORTHO05D009646 4.5e-169 599.0 669 54.1
Thecc.03G116000 Theobroma cacao HOM05D007670 ORTHO05D009646 2.6e-153 546.6 662 57.4
SalBow5G5044 Salvia bowleyana HOM05D007670 ORTHO05D009646 1.1e-151 541.2 687 54.6
SalBow5G0325 Salvia bowleyana HOM05D007670 ORTHO05D009646 3.2e-151 539.7 687 54.4
Actinidia08035 Actinidia chinensis HOM05D007670 ORTHO05D009646 2.8e-147 526.6 671 51.1
PGR044G2723 Punica granatum HOM05D007670 ORTHO05D009646 2.4e-146 523.5 658 55.5
Solyc03g112110.1 Solanum lycopersicum HOM05D007670 ORTHO05D009646 1.5e-145 520.8 380 81.6
Peaxi162Scf00089g01229 Petunia axillaris HOM05D007670 ORTHO05D009646 5.9e-145 518.8 382 81.7
TWI39G0169 Tripterygium wilfordii HOM05D007670 ORTHO05D009646 5.0e-144 515.8 679 53.0
Potri.015G084300 Populus trichocarpa HOM05D007670 ORTHO05D009646 3.3e-140 503.1 639 56.0
Gohir.A03G074800 Gossypium hirsutum HOM05D007670 ORTHO05D009646 4.3e-140 502.7 662 53.2
TWI23G1319 Tripterygium wilfordii HOM05D007670 ORTHO05D009646 5.7e-140 502.3 677 53.3
Migut.O00167 Erythranthe guttata HOM05D007670 ORTHO05D009646 9.1e-138 495.0 594 56.1
COL.COLO4_33501 Corchorus olitorius HOM05D007670 ORTHO05D009646 3.4e-137 493.0 674 52.7
Ciclev10024352m.g Citrus clementina HOM05D007670 ORTHO05D009646 6.5e-136 488.8 649 52.2
Glyma.05G042100 Glycine max HOM05D007670 ORTHO05D009646 4.2e-135 486.1 676 51.0
ECA246G3610 Erigeron canadensis HOM05D007670 ORTHO05D009646 1.5e-132 477.6 714 48.5
Lsat_1_v5_gn_5_13921 Lactuca sativa HOM05D007670 ORTHO05D009646 3.3e-132 476.5 740 48.6
arahy.Tifrunner.gnm1.ann1.4HF9FM Arachis hypogaea HOM05D007670 ORTHO05D009646 2.2e-131 473.8 685 48.5
FAN18G1020 Fragaria x ananassa HOM05D007670 ORTHO05D009646 6.3e-131 472.2 677 46.1
Atru.chr9.2593 Acer truncatum HOM05D007670 ORTHO05D009646 8.2e-131 471.9 673 47.7
VMungo1215G0346 Vigna mungo HOM05D007670 ORTHO05D009646 1.1e-130 471.5 645 47.8
Cfa019228 Carpinus fangiana HOM05D007670 ORTHO05D009646 1.6e-129 467.6 688 46.8
arahy.Tifrunner.gnm1.ann1.2S9CTF Arachis hypogaea HOM05D007670 ORTHO05D009646 2.2e-128 463.8 660 48.6
Lj4g0014046 Lotus japonicus HOM05D007670 ORTHO05D009646 6.5e-128 462.2 678 48.7
FAN04G2873 Fragaria x ananassa HOM05D007670 ORTHO05D009646 1.5e-127 461.1 669 45.9
FvH4_5g06391 Fragaria vesca HOM05D007670 ORTHO05D009646 5.5e-127 459.1 677 45.2
FAN08G1903 Fragaria x ananassa HOM05D007670 ORTHO05D009646 1.6e-126 457.6 677 45.8
FAN13G0035 Fragaria x ananassa HOM05D007670 ORTHO05D009646 3.6e-126 456.4 669 45.7
TPR.G37476 Trifolium pratense HOM05D007670 ORTHO05D009646 3.0e-125 453.4 710 45.4
Ca_19420_v3 Cicer arietinum L. HOM05D007670 ORTHO05D009646 4.0e-125 453.0 634 48.6
Manes.06G111300 Manihot esculenta HOM05D007670 ORTHO05D009646 8.8e-125 451.8 562 56.0
Phvul.003G205800 Phaseolus vulgaris HOM05D007670 ORTHO05D009646 7.5e-124 448.7 664 47.1
Peaxi162Scf00089g01230 Petunia axillaris HOM05D007670 ORTHO05D009646 9.7e-124 448.4 277 85.9
Psat4g061560 Pisum sativum HOM05D007670 ORTHO05D009646 9.7e-124 448.4 671 47.7
Solyc03g112120.3 Solanum lycopersicum HOM05D007670 ORTHO05D009646 1.3e-123 448.0 277 84.1
Aqoxy3G01244 Aquilegia oxysepala HOM05D007670 ORTHO05D009646 6.3e-123 445.7 664 51.2
Medtr4g104750 Medicago truncatula HOM05D007670 ORTHO05D009646 8.2e-123 445.3 650 48.0
DCAR_007451 Daucus carota HOM05D007670 ORTHO05D009646 1.1e-122 444.9 699 47.1
Gorai.003G106900 Gossypium raimondii HOM05D007670 ORTHO05D009646 1.3e-120 438.0 572 53.1
Gohir.D03G101500 Gossypium hirsutum HOM05D007670 ORTHO05D009646 5.5e-119 432.6 572 52.8
CANSAT80G0945 Cannabis sativa HOM05D007670 ORTHO05D009646 6.1e-118 429.1 663 44.6
Prupe.5G164600 Prunus persica HOM05D007670 ORTHO05D009646 1.0e-117 428.3 666 46.2
ClCG03G003050 Citrullus lanatus HOM05D007670 ORTHO05D009646 8.8e-117 425.2 658 45.0
PSO478G3950 Papaver somniferum HOM05D007670 ORTHO05D009646 3.1e-114 416.8 672 46.6
RcHm_v2.0_Chr7g0192411 Rosa chinensis HOM05D007670 ORTHO05D009646 3.5e-113 413.3 571 46.2
Sed0003800 Sechium edule HOM05D007670 ORTHO05D009646 5.0e-112 409.5 647 44.4
MD14G1170500 Malus domestica HOM05D007670 ORTHO05D009646 1.2e-110 404.8 602 45.7
Lj5C130G15 Lonicera japonica HOM05D007670 ORTHO05D009646 1.6e-110 404.4 626 44.7
ATR0824G010 Amborella trichopoda HOM05D007670 ORTHO05D009646 4.7e-110 402.9 630 45.6
Hma1.2p1_1092F.1_g255930 Hydrangea macrophylla HOM05D007670 ORTHO05D009646 1.8e-106 391.0 449 57.9
HanXRQChr05g0156201 Helianthus annuus HOM05D007670 ORTHO05D009646 8.9e-101 372.1 568 48.2
Eucgr.K02784 Eucalyptus grandis HOM05D007670 ORTHO05D009646 1.2e-97 361.7 440 55.5
GSVIVG01007632001 Vitis vinifera HOM05D007670 ORTHO05D009646 2.0e-97 360.9 446 56.5
Dinv20593 Davidia involucrata HOM05D007670 ORTHO05D009646 2.7e-97 360.5 458 57.6
CiPaw.12G031800 Carya illinoinensis HOM05D007670 ORTHO05D009646 5.0e-88 329.7 580 42.9
TAR629G1516 Trochodendron aralioides HOM05D007670 ORTHO05D009646 6.6e-88 329.3 303 63.4
QL10p006759 Quercus lobata HOM05D007670 ORTHO05D009646 1.0e-72 278.9 481 43.2
HPP92_003438 Vanilla planifolia HOM05D001493 ORTHO05D001681 7.3e-71 272.7 555 40.0
Glyma.17G124800 Glycine max HOM05D007670 ORTHO05D009646 2.1e-70 271.2 437 45.1
MELO3C002304.2 Cucumis melo HOM05D007670 ORTHO05D009646 2.8e-70 270.8 303 53.5
HPP92_001311 Vanilla planifolia HOM05D007670 ORTHO05D009646 1.8e-61 241.5 563 36.4
Cpa.g.sc159.12 Carica papaya HOM05D007670 ORTHO05D009646 4.0e-61 240.4 684 34.2
Actinidia24601 Actinidia chinensis HOM05D007670 ORTHO05D009646 2.1e-57 228.0 228 55.7
Zm00001eb388830 Zea mays HOM05D007670 ORTHO05D009646 2.3e-56 224.6 643 34.2
Glyma.17G124700 Glycine max HOM05D007670 ORTHO05D009646 8.7e-48 196.1 217 54.4
SEGI_28887 Sequoiadendron giganteum HOM05D007670 ORTHO05D009646 9.6e-47 192.6 259 45.9
TAR629G0999 Trochodendron aralioides HOM05D007670 ORTHO05D009646 6.0e-41 173.3 220 51.8
Sabra15G0107400 Salix brachista HOM05D007670 ORTHO05D009646 1.3e-32 145.6 514 30.4
Zm00001eb143920 Zea mays HOM05D007670 ORTHO05D009646 7.4e-31 139.8 315 35.6
Os01g0909300 Oryza sativa ssp. japonica HOM05D007670 ORTHO05D009646 9.7e-31 139.4 167 47.3
Pp3c11_2120 Physcomitrium patens HOM05D007670 ORTHO05D009646 8.2e-30 136.3 235 37.4
Zm00001eb393770 Zea mays HOM05D007670 ORTHO05D009646 4.5e-28 130.6 165 46.1
Pp3c10_12340 Physcomitrium patens HOM05D007670 ORTHO05D009646 5.0e-27 127.1 266 34.2
QL10p006748 Quercus lobata HOM05D007670 ORTHO05D009646 2.5e-26 124.8 139 55.4
Pp3c21_7410 Physcomitrium patens HOM05D007670 ORTHO05D009646 1.8e-24 118.6 231 32.5
Pp3c26_6480 Physcomitrium patens HOM05D007670 ORTHO05D009646 2.0e-23 115.2 307 27.7
Pp3c26_6484 Physcomitrium patens HOM05D007670 ORTHO05D009646 2.0e-23 115.2 307 27.7
Mapoly0020s0028 Marchantia polymorpha HOM05D007670 ORTHO05D009646 1.1e-21 109.4 225 36.9
Pp3c18_13530 Physcomitrium patens HOM05D007670 ORTHO05D009646 1.8e-21 108.6 306 30.4
Pp3c7_23860 Physcomitrium patens HOM05D007670 ORTHO05D009646 3.6e-17 94.4 278 28.8
CsaV3_1G008900 Cucumis sativus L. HOM05D007670 ORTHO05D009646 1.7e-14 85.5 128 47.7
SEGI_38678 Sequoiadendron giganteum HOM05D007670 ORTHO05D009646 8.2e-14 83.2 466 26.2
SMO118G0556 Selaginella moellendorffii HOM05D007837 ORTHO05D009965 2.6e-12 78.2 228 29.4
Migut.M01930 Erythranthe guttata HOM05D007837 ORTHO05D009965 2.7e-09 68.2 221 27.6
MELO3C031542.2 Cucumis melo HOM05D007670 ORTHO05D009646 6.1e-09 67.0 103 44.7
Aqoxy3G00774 Aquilegia oxysepala HOM05D007670 ORTHO05D009646 1.8e-08 65.5 125 35.2
PSO675G4978 Papaver somniferum HOM05D007837 ORTHO05D009965 2.6e-07 61.6 278 25.2
VMungo1127G0844 Vigna mungo HOM05D007837 ORTHO05D009965 2.6e-07 61.6 234 26.1
Oeu008970.1 Olea europaea HOM05D007837 ORTHO05D009965 4.4e-07 60.8 226 24.3
Actinidia33640 Actinidia chinensis HOM05D007837 ORTHO05D009965 5.7e-07 60.5 204 27.5
MELO3C007007.2 Cucumis melo HOM05D007837 ORTHO05D009965 7.5e-07 60.1 248 24.2
Thecc.06G015600 Theobroma cacao HOM05D007837 ORTHO05D009965 9.7e-07 59.7 237 24.1
Gohir.D05G113500 Gossypium hirsutum HOM05D007837 ORTHO05D009965 1.7e-06 58.9 238 26.9
PSO541G2349 Papaver somniferum HOM05D007837 ORTHO05D009965 1.7e-06 58.9 278 25.2
AagrBONN_evm.TU.Sc2ySwM_228.3840 Anthoceros agrestis HOM05D007837 ORTHO05D009965 2.2e-06 58.5 295 23.7
Duzib160G0902 Durio zibethinus HOM05D007837 ORTHO05D009965 2.2e-06 58.5 238 25.6
Gorai.009G117500 Gossypium raimondii HOM05D007837 ORTHO05D009965 2.8e-06 58.2 238 26.9
ClCG01G025810 Citrullus lanatus HOM05D007837 ORTHO05D009965 3.7e-06 57.8 217 24.0
CsaV3_6G053020 Cucumis sativus L. HOM05D007837 ORTHO05D009965 3.7e-06 57.8 249 24.9
SalBow8G2294 Salvia bowleyana HOM05D007837 ORTHO05D009965 3.7e-06 57.8 205 25.9
SalBow8G2521 Salvia bowleyana HOM05D007837 ORTHO05D009965 3.7e-06 57.8 205 25.9
TWI15G0587 Tripterygium wilfordii HOM05D007837 ORTHO05D009965 3.7e-06 57.8 287 23.3
Actinidia36758 Actinidia chinensis HOM05D007670 ORTHO05D009646 4.8e-06 57.4 78 47.4
Lj3g0012849 Lotus japonicus HOM05D007837 ORTHO05D009965 4.8e-06 57.4 214 24.8
Dinv06743 Davidia involucrata HOM05D007837 ORTHO05D009965 6.3e-06 57.0 204 25.0
Gohir.A05G113000 Gossypium hirsutum HOM05D007837 ORTHO05D009965 6.3e-06 57.0 238 26.9
DCAR_001340 Daucus carota HOM05D007837 ORTHO05D009965 8.2e-06 56.6 207 24.6


User provided reference genes

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