Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002516g0010 Nicotiana tabacum HOM05D002165 ORTHO05D001531 3.4e-39 164.5 79 100.0
Nitab4.5_0005662g0010 Nicotiana tabacum HOM05D002165 ORTHO05D001531 2.4e-37 158.3 79 96.2
Solyc01g101260.2 Solanum lycopersicum HOM05D002165 ORTHO05D001531 1.7e-27 125.6 79 79.7
Sopen01g044710 Solanum pennellii HOM05D002165 ORTHO05D001531 1.7e-27 125.6 79 79.7
Peaxi162Scf00194g00002 Petunia axillaris HOM05D002165 ORTHO05D001531 5.1e-27 124.0 76 81.6
CAN.G1248.15 Capsicum annuum HOM05D002165 ORTHO05D001531 5.6e-26 120.6 78 75.6
Nitab4.5_0000800g0060 Nicotiana tabacum HOM05D002165 ORTHO05D001531 2.9e-22 108.2 74 73.0
Nitab4.5_0003573g0030 Nicotiana tabacum HOM05D002165 ORTHO05D001531 2.9e-22 108.2 74 73.0
Nitab4.5_0003573g0040 Nicotiana tabacum HOM05D002165 ORTHO05D001531 2.9e-22 108.2 74 73.0
Nitab4.5_0003573g0050 Nicotiana tabacum HOM05D002165 ORTHO05D001531 1.7e-19 99.0 73 71.2
Migut.N00975 Erythranthe guttata HOM05D002165 ORTHO05D001531 5.6e-18 94.0 76 61.8
Cc02_g35880 Coffea canephora HOM05D002165 ORTHO05D001531 3.1e-16 88.2 78 57.7
PGSC0003DMG400018282 Solanum tuberosum HOM05D002165 ORTHO05D001531 4.0e-16 87.8 64 70.3
Migut.B00883 Erythranthe guttata HOM05D002165 ORTHO05D001531 5.3e-16 87.4 70 61.4
CSS0027376 Camellia sinensis var. sinensis HOM05D002165 ORTHO05D001531 2.7e-12 75.1 63 57.1
Oeu000103.1 Olea europaea HOM05D008018 ORTHO05D001531 4.6e-12 74.3 72 58.3
Oeu062787.1 Olea europaea HOM05D002165 ORTHO05D001531 1.3e-11 72.8 69 52.2
DCAR_001884 Daucus carota HOM05D002165 ORTHO05D001531 1.8e-11 72.4 71 49.3
DCAR_001885 Daucus carota HOM05D002165 ORTHO05D001531 2.3e-11 72.0 71 49.3
DCAR_001886 Daucus carota HOM05D002165 ORTHO05D001531 2.3e-11 72.0 73 49.3
DCAR_002291 Daucus carota HOM05D002165 ORTHO05D001531 2.3e-11 72.0 73 49.3
FAN02G1676 Fragaria x ananassa HOM05D002165 ORTHO05D001531 2.3e-11 72.0 63 57.1
FAN05G4164 Fragaria x ananassa HOM05D002165 ORTHO05D001531 2.3e-11 72.0 63 57.1
FAN09G0584 Fragaria x ananassa HOM05D002165 ORTHO05D001531 2.3e-11 72.0 63 57.1
ECA236G1383 Erigeron canadensis HOM05D002165 ORTHO05D001531 3.0e-11 71.6 72 48.6
Lsat_1_v5_gn_7_63581 Lactuca sativa HOM05D002165 ORTHO05D001531 3.0e-11 71.6 74 52.7
DCAR_001887 Daucus carota HOM05D002165 ORTHO05D001531 6.7e-11 70.5 74 47.3
DCAR_002292 Daucus carota HOM05D002165 ORTHO05D001531 1.5e-10 69.3 74 45.9
FvH4_6g08530 Fragaria vesca HOM05D002165 ORTHO05D001531 1.5e-10 69.3 63 55.6
FAN14G5435 Fragaria x ananassa HOM05D002165 ORTHO05D001531 1.5e-10 69.3 63 55.6
Lalb_Chr07g0181571 Lupinus albus HOM05D002165 ORTHO05D001531 1.5e-10 69.3 67 55.2
ECA240G0021 Erigeron canadensis HOM05D002165 ORTHO05D001531 1.9e-10 68.9 74 48.6
Lsat_1_v5_gn_9_85041 Lactuca sativa HOM05D002165 ORTHO05D001531 1.9e-10 68.9 72 45.8
MD04G1186400 Malus domestica HOM05D002165 ORTHO05D001531 1.9e-10 68.9 68 54.4
Prupe.6G304300 Prunus persica HOM05D002165 ORTHO05D001531 3.3e-10 68.2 63 57.1
Oeu061905.1 Olea europaea HOM05D002165 ORTHO05D001531 5.6e-10 67.4 81 46.9
Lalb_Chr12g0200511 Lupinus albus HOM05D002165 ORTHO05D001531 7.4e-10 67.0 68 52.9
Cpa.g.sc48.225 Carica papaya HOM05D002165 ORTHO05D001531 9.6e-10 66.6 64 56.2
ECA240G1387 Erigeron canadensis HOM05D002165 ORTHO05D001531 1.3e-09 66.2 74 47.3
Prupe.6G304200 Prunus persica HOM05D002165 ORTHO05D001531 1.3e-09 66.2 63 55.6
Lsat_1_v5_gn_7_63540 Lactuca sativa HOM05D002165 ORTHO05D001531 2.1e-09 65.5 76 47.4
ECA240G3242 Erigeron canadensis HOM05D002165 ORTHO05D001531 2.8e-09 65.1 76 50.0
Lsat_1_v5_gn_7_63880 Lactuca sativa HOM05D002165 ORTHO05D001531 3.7e-09 64.7 74 45.9
RcHm_v2.0_Chr1g0321401 Rosa chinensis HOM05D002165 ORTHO05D001531 3.7e-09 64.7 62 53.2
ECA240G3359 Erigeron canadensis HOM05D002165 ORTHO05D001531 4.8e-09 64.3 80 46.2
Lsat_1_v5_gn_9_84961 Lactuca sativa HOM05D002165 ORTHO05D001531 4.8e-09 64.3 71 40.8
Lsat_1_v5_gn_9_85080 Lactuca sativa HOM05D002165 ORTHO05D001531 4.8e-09 64.3 72 48.6
ECA236G2737 Erigeron canadensis HOM05D002165 ORTHO05D001531 8.1e-09 63.5 72 41.7
ECA240G0866 Erigeron canadensis HOM05D002165 ORTHO05D001531 8.1e-09 63.5 73 50.7
Lsat_1_v5_gn_7_63620 Lactuca sativa HOM05D002165 ORTHO05D001531 1.4e-08 62.8 74 48.6
Oeu062782.1 Olea europaea HOM05D002165 ORTHO05D001531 1.4e-08 62.8 85 44.7
Rhsim11G0104900 Rhododendron simsii HOM05D002165 ORTHO05D001531 1.4e-08 62.8 63 49.2
CSS0044388 Camellia sinensis var. sinensis HOM05D002165 ORTHO05D001531 1.8e-08 62.4 74 50.0
Dinv30952 Davidia involucrata HOM05D002165 ORTHO05D001531 1.8e-08 62.4 53 56.6
Sed0005500 Sechium edule HOM05D002165 ORTHO05D001531 1.8e-08 62.4 64 53.1
CARHR186860 Cardamine hirsuta HOM05D002165 ORTHO05D001531 2.4e-08 62.0 68 51.5
Psat4g020920 Pisum sativum HOM05D002165 ORTHO05D001531 2.4e-08 62.0 67 52.2
Actinidia17737 Actinidia chinensis HOM05D002165 ORTHO05D001531 3.1e-08 61.6 66 53.0
Eucgr.H01324 Eucalyptus grandis HOM05D002165 ORTHO05D001531 3.1e-08 61.6 75 46.7
Lalb_Chr02g0147531 Lupinus albus HOM05D008018 ORTHO05D001531 4.0e-08 61.2 78 50.0
Sed0022046 Sechium edule HOM05D002165 ORTHO05D001531 5.3e-08 60.8 64 54.7
Sed0026735 Sechium edule HOM05D002165 ORTHO05D001531 5.3e-08 60.8 64 50.0
BcaB07g29941 Brassica carinata HOM05D002165 ORTHO05D001531 6.9e-08 60.5 67 47.8
BcaC03g17834 Brassica carinata HOM05D002165 ORTHO05D001531 6.9e-08 60.5 67 49.3
BcaNung03907 Brassica carinata HOM05D002165 ORTHO05D001531 6.9e-08 60.5 67 49.3
BcaNung06223 Brassica carinata HOM05D002165 ORTHO05D001531 6.9e-08 60.5 67 49.3
A02p39040 Brassica napus HOM05D002165 ORTHO05D001531 6.9e-08 60.5 67 49.3
A06p36950 Brassica napus HOM05D002165 ORTHO05D001531 6.9e-08 60.5 67 49.3
C02p58650 Brassica napus HOM05D002165 ORTHO05D001531 6.9e-08 60.5 67 49.3
BolC2t11925H Brassica oleracea HOM05D002165 ORTHO05D001531 6.9e-08 60.5 67 49.3
BraA06t26620Z Brassica rapa HOM05D002165 ORTHO05D001531 6.9e-08 60.5 67 49.3
Phvul.003G124200 Phaseolus vulgaris HOM05D002165 ORTHO05D001531 6.9e-08 60.5 66 56.1
Carub.0006s2437 Capsella rubella HOM05D002165 ORTHO05D001531 9.0e-08 60.1 68 50.0
RcHm_v2.0_Chr3g0458591 Rosa chinensis HOM05D002165 ORTHO05D001531 9.0e-08 60.1 64 51.6
BcaNung03681 Brassica carinata HOM05D002165 ORTHO05D001531 1.2e-07 59.7 67 49.3
C07p41550 Brassica napus HOM05D002165 ORTHO05D001531 1.2e-07 59.7 67 49.3
BolC7t44687H Brassica oleracea HOM05D002165 ORTHO05D001531 1.2e-07 59.7 67 49.3
BraA02t08873Z Brassica rapa HOM05D002165 ORTHO05D001531 1.2e-07 59.7 67 49.3
MD16G1133300 Malus domestica HOM05D002165 ORTHO05D001531 1.2e-07 59.7 77 49.4
AL6G38560 Arabidopsis lyrata HOM05D002165 ORTHO05D001531 1.5e-07 59.3 68 48.5
MELO3C025017.2 Cucumis melo HOM05D002165 ORTHO05D001531 1.5e-07 59.3 66 51.5
Dinv24517 Davidia involucrata HOM05D002165 ORTHO05D001531 1.5e-07 59.3 70 47.1
Psat6g153800 Pisum sativum HOM05D008018 ORTHO05D001531 1.5e-07 59.3 75 44.0
ClCG00G002170 Citrullus lanatus HOM05D002165 ORTHO05D001531 2.0e-07 58.9 66 51.5
ClCG08G002310 Citrullus lanatus HOM05D002165 ORTHO05D001531 2.0e-07 58.9 66 51.5
ClCG08G002360 Citrullus lanatus HOM05D002165 ORTHO05D001531 2.0e-07 58.9 66 51.5
Lalb_Chr13g0299051 Lupinus albus HOM05D002165 ORTHO05D001531 2.0e-07 58.9 67 47.8
CSS0004014 Camellia sinensis var. sinensis HOM05D002165 ORTHO05D001531 2.6e-07 58.5 72 50.0
CsaV3_6G002670 Cucumis sativus L. HOM05D002165 ORTHO05D001531 2.6e-07 58.5 66 51.5
MD13G1137400 Malus domestica HOM05D002165 ORTHO05D001531 2.6e-07 58.5 77 49.4
Aqoxy5G02840 Aquilegia oxysepala HOM05D002165 ORTHO05D001531 3.4e-07 58.2 75 45.3
MELO3C015240.2 Cucumis melo HOM05D002165 ORTHO05D001531 4.5e-07 57.8 67 52.2
Oeu062790.1 Olea europaea HOM05D002165 ORTHO05D001531 4.5e-07 57.8 81 45.7
Ciclev10013220m.g Citrus clementina HOM05D002165 ORTHO05D001531 5.8e-07 57.4 70 50.0
COL.COLO4_36933 Corchorus olitorius HOM05D002165 ORTHO05D001531 5.8e-07 57.4 74 43.2
Lalb_Chr21g0310051 Lupinus albus HOM05D008018 ORTHO05D001531 5.8e-07 57.4 77 48.1
Psat2g102520 Pisum sativum HOM05D008018 ORTHO05D001531 5.8e-07 57.4 75 46.7
Psat6g154000 Pisum sativum HOM05D008018 ORTHO05D001531 5.8e-07 57.4 75 44.0
Atru.chr12.1534 Acer truncatum HOM05D002165 ORTHO05D001531 7.6e-07 57.0 72 45.8
Atru.chr12.1536 Acer truncatum HOM05D002165 ORTHO05D001531 7.6e-07 57.0 72 45.8
BcaB04g19717 Brassica carinata HOM05D002165 ORTHO05D001531 7.6e-07 57.0 67 46.3
CsaV3_1G038050 Cucumis sativus L. HOM05D002165 ORTHO05D001531 7.6e-07 57.0 67 52.2
Eucgr.H01323 Eucalyptus grandis HOM05D002165 ORTHO05D001531 7.6e-07 57.0 59 50.8
Psat6g154040 Pisum sativum HOM05D008018 ORTHO05D001531 7.6e-07 57.0 75 44.0
Ciclev10013222m.g Citrus clementina HOM05D002165 ORTHO05D001531 9.9e-07 56.6 71 50.7
MELO3C025020.2 Cucumis melo HOM05D002165 ORTHO05D001531 9.9e-07 56.6 67 49.3
Gohir.D09G243000 Gossypium hirsutum HOM05D002165 ORTHO05D001531 9.9e-07 56.6 74 43.2
Gorai.006G266800 Gossypium raimondii HOM05D002165 ORTHO05D001531 9.9e-07 56.6 74 43.2
Lj5g0006453 Lotus japonicus HOM05D008018 ORTHO05D001531 9.9e-07 56.6 75 45.3
Lj5g0009947 Lotus japonicus HOM05D008018 ORTHO05D001531 9.9e-07 56.6 75 45.3
Sed0009609 Sechium edule HOM05D002165 ORTHO05D001531 9.9e-07 56.6 64 51.6
TAR633G1086 Trochodendron aralioides HOM05D002165 ORTHO05D001531 9.9e-07 56.6 64 46.9
arahy.Tifrunner.gnm1.ann1.RMBA11 Arachis hypogaea HOM05D008018 ORTHO05D001531 1.3e-06 56.2 75 45.3
BcaC04g23632 Brassica carinata HOM05D002165 ORTHO05D001531 1.3e-06 56.2 67 46.3
A09p05720 Brassica napus HOM05D002165 ORTHO05D001531 1.3e-06 56.2 67 46.3
C09p06310 Brassica napus HOM05D002165 ORTHO05D001531 1.3e-06 56.2 67 46.3
BolC9t53551H Brassica oleracea HOM05D002165 ORTHO05D001531 1.3e-06 56.2 67 46.3
BraA09t36213Z Brassica rapa HOM05D002165 ORTHO05D001531 1.3e-06 56.2 67 46.3
Glyma.03G228000 Glycine max HOM05D008018 ORTHO05D001531 1.3e-06 56.2 75 37.3
THA.LOC104818754 Tarenaya hassleriana HOM05D002165 ORTHO05D001531 1.3e-06 56.2 63 49.2
Ca_10205_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 1.7e-06 55.8 65 50.8
COL.COLO4_05484 Corchorus olitorius HOM05D002165 ORTHO05D001531 1.7e-06 55.8 72 52.8
Gohir.A09G242300 Gossypium hirsutum HOM05D002165 ORTHO05D001531 1.7e-06 55.8 74 41.9
Medtr0187s0030 Medicago truncatula HOM05D008018 ORTHO05D001531 1.7e-06 55.8 64 51.6
Medtr0187s0060 Medicago truncatula HOM05D008018 ORTHO05D001531 1.7e-06 55.8 64 51.6
Psat3g015160 Pisum sativum HOM05D008018 ORTHO05D001531 1.7e-06 55.8 76 40.8
Thecc.09G084900 Theobroma cacao HOM05D002165 ORTHO05D001531 1.7e-06 55.8 66 48.5
Aa31LG11G9930 Aethionema arabicum HOM05D002165 ORTHO05D001531 2.2e-06 55.5 65 49.2
Thhalv10005460m.g Eutrema salsugineum HOM05D002165 ORTHO05D001531 2.2e-06 55.5 67 46.3
Psat6g153880 Pisum sativum HOM05D008018 ORTHO05D001531 2.2e-06 55.5 75 44.0
Thecc.05G329700 Theobroma cacao HOM05D002165 ORTHO05D001531 2.2e-06 55.5 69 50.7
arahy.Tifrunner.gnm1.ann1.1WI4WZ Arachis hypogaea HOM05D008018 ORTHO05D001531 2.9e-06 55.1 75 44.0
CsaV3_6G002640 Cucumis sativus L. HOM05D002165 ORTHO05D001531 2.9e-06 55.1 67 47.8
Glyma.13G117400 Glycine max HOM05D002165 ORTHO05D001531 3.8e-06 54.7 68 50.0
MD13G1137300 Malus domestica HOM05D002165 ORTHO05D001531 3.8e-06 54.7 77 46.8
Prupe.4G278700 Prunus persica HOM05D002165 ORTHO05D001531 3.8e-06 54.7 67 46.3
Prupe.1G207900 Prunus persica HOM05D002165 ORTHO05D001531 4.9e-06 54.3 77 48.1
TWI12G1307 Tripterygium wilfordii HOM05D002165 ORTHO05D001531 4.9e-06 54.3 70 47.1
EL10Ac4g09564 Beta vulgaris HOM05D002165 ORTHO05D001531 6.4e-06 53.9 48 62.5
Ciclev10013801m.g Citrus clementina HOM05D002165 ORTHO05D001531 6.4e-06 53.9 70 51.4
MELO3C004151.2 Cucumis melo HOM05D002165 ORTHO05D001531 6.4e-06 53.9 59 52.5
Eucgr.H01333 Eucalyptus grandis HOM05D002165 ORTHO05D001531 6.4e-06 53.9 65 43.1
PSO761G0534 Papaver somniferum HOM05D002165 ORTHO05D001531 6.4e-06 53.9 61 47.5
Thecc.04G314700 Theobroma cacao HOM05D002165 ORTHO05D001531 6.4e-06 53.9 74 41.9
vmacro23432 Vaccinium macrocarpon HOM05D002165 ORTHO05D001531 6.4e-06 53.9 65 53.8
Ah.06g190740 Amaranthus hybridus HOM05D002165 ORTHO05D001531 8.4e-06 53.5 51 56.9
Ah.10g026790 Amaranthus hybridus HOM05D002165 ORTHO05D001531 8.4e-06 53.5 51 56.9
Duzib128G1662 Durio zibethinus HOM05D002165 ORTHO05D001531 8.4e-06 53.5 66 48.5
Glyma.17G042500 Glycine max HOM05D002165 ORTHO05D001531 8.4e-06 53.5 66 48.5
Hma1.2p1_0759F.1_g213900 Hydrangea macrophylla HOM05D050867 ORTHO05D001531 8.4e-06 53.5 37 54.1
Hma1.2p1_0759F.1_g213905 Hydrangea macrophylla HOM05D050867 ORTHO05D001531 8.4e-06 53.5 37 54.1
Lalb_Chr06g0167291 Lupinus albus HOM05D008018 ORTHO05D001531 8.4e-06 53.5 79 44.3
Psat2g102400 Pisum sativum HOM05D008018 ORTHO05D001531 8.4e-06 53.5 75 45.3
Psat2g102480 Pisum sativum HOM05D008018 ORTHO05D001531 8.4e-06 53.5 75 45.3


User provided reference genes

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