Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002510g0050 Nicotiana tabacum HOM05D005711 ORTHO05D007125 0.0e+00 1622.1 830 100.0
Peaxi162Scf00650g00112 Petunia axillaris HOM05D005711 ORTHO05D007125 0.0e+00 1122.5 1034 62.7
Dinv24132 Davidia involucrata HOM05D005711 ORTHO05D007125 2.8e-208 729.6 1107 40.7
Oeu018003.1 Olea europaea HOM05D005711 ORTHO05D007125 2.2e-205 719.9 1082 42.4
Cc06_g17000 Coffea canephora HOM05D005711 ORTHO05D007125 2.6e-198 696.4 1085 41.1
Migut.J01777 Erythranthe guttata HOM05D005711 ORTHO05D007125 2.9e-197 693.0 1094 39.9
GSVIVG01033319001 Vitis vinifera HOM05D005711 ORTHO05D007125 3.8e-197 692.6 1099 39.5
Duzib093G0922 Durio zibethinus HOM05D005711 ORTHO05D007125 1.1e-196 691.0 1010 40.7
MSTRG.6443 Avicennia marina HOM05D005711 ORTHO05D007125 4.2e-196 689.1 1088 39.7
CSS0036262 Camellia sinensis var. sinensis HOM05D005711 ORTHO05D007125 2.1e-195 686.8 1084 40.1
Actinidia09354 Actinidia chinensis HOM05D005711 ORTHO05D007125 2.4e-191 673.3 1080 39.5
TAR633G2044 Trochodendron aralioides HOM05D005711 ORTHO05D007125 1.4e-188 664.1 1110 39.0
Thecc.05G160700 Theobroma cacao HOM05D005711 ORTHO05D007125 4.6e-187 659.1 1095 38.3
Potri.006G054100 Populus trichocarpa HOM05D005711 ORTHO05D007125 3.3e-185 652.9 1095 37.7
Gorai.002G230200 Gossypium raimondii HOM05D005711 ORTHO05D007125 7.3e-185 651.7 1100 37.9
SGA_v2.0_scaffold69G23097 Striga asiatica HOM05D005711 ORTHO05D007125 6.2e-184 648.7 1124 38.1
Gohir.A01G196500 Gossypium hirsutum HOM05D005711 ORTHO05D007125 1.5e-182 644.0 1100 37.7
HanXRQChr13g0390691 Helianthus annuus HOM05D005711 ORTHO05D007125 8.4e-181 638.3 1083 38.4
QL07p021385 Quercus lobata HOM05D005711 ORTHO05D007125 1.4e-180 637.5 1116 37.6
CiPaw.09G035700 Carya illinoinensis HOM05D005711 ORTHO05D007125 2.4e-180 636.7 1084 37.9
Cfa016851 Carpinus fangiana HOM05D005711 ORTHO05D007125 3.9e-178 629.4 1047 37.4
Ciclev10004212m.g Citrus clementina HOM05D005711 ORTHO05D007125 2.5e-177 626.7 1086 36.1
DCAR_009055 Daucus carota HOM05D005711 ORTHO05D007125 5.6e-177 625.5 1024 38.9
Prupe.8G156400 Prunus persica HOM05D005711 ORTHO05D007125 5.6e-177 625.5 1111 37.5
Nn7g36123 Nelumbo nucifera HOM05D005711 ORTHO05D007125 3.7e-176 622.9 1100 37.2
FAN24G0778 Fragaria x ananassa HOM05D005711 ORTHO05D007125 1.8e-175 620.5 1105 35.4
CANSAT80G2574 Cannabis sativa HOM05D005711 ORTHO05D007125 2.4e-175 620.2 1088 35.2
FvH4_2g02670 Fragaria vesca HOM05D005711 ORTHO05D007125 4.0e-175 619.4 1105 35.4
Manes.09G026800 Manihot esculenta HOM05D005711 ORTHO05D007125 2.0e-174 617.1 1107 36.9
FAN15G2563 Fragaria x ananassa HOM05D005711 ORTHO05D007125 3.4e-174 616.3 1105 35.6
TWI53G1199 Tripterygium wilfordii HOM05D005711 ORTHO05D007125 4.9e-173 612.5 1085 36.9
Haze_19901 Corylus avellana HOM05D005711 ORTHO05D007125 8.4e-173 611.7 1035 37.8
THA.LOC104802271 Tarenaya hassleriana HOM05D005711 ORTHO05D007125 1.1e-172 611.3 1085 36.4
MD05G1111300 Malus domestica HOM05D005711 ORTHO05D007125 2.1e-171 607.1 1097 35.9
FAN20G1206 Fragaria x ananassa HOM05D005711 ORTHO05D007125 1.8e-170 604.0 1109 35.1
Lj1g0025810 Lotus japonicus HOM05D005711 ORTHO05D007125 2.3e-170 603.6 1090 36.3
RcHm_v2.0_Chr7g0177161 Rosa chinensis HOM05D005711 ORTHO05D007125 2.3e-170 603.6 1090 36.1
RcHm_v2.0_Chr6g0247071 Rosa chinensis HOM05D005711 ORTHO05D007125 3.0e-170 603.2 1086 35.5
Ca_08477_v3 Cicer arietinum L. HOM05D005711 ORTHO05D007125 2.1e-168 597.0 1088 36.0
ECA248G2859 Erigeron canadensis HOM05D005711 ORTHO05D007125 3.1e-167 593.2 1056 37.7
Medtr7g092130 Medicago truncatula HOM05D005711 ORTHO05D007125 1.3e-165 587.8 1090 36.1
VMungo1383G1829 Vigna mungo HOM05D005711 ORTHO05D007125 6.5e-165 585.5 1091 36.1
AL5G39150 Arabidopsis lyrata HOM05D005711 ORTHO05D007125 4.2e-164 582.8 1083 36.0
Lalb_Chr20g0110821 Lupinus albus HOM05D005711 ORTHO05D007125 2.7e-163 580.1 1089 35.4
Lsat_1_v5_gn_5_162580 Lactuca sativa HOM05D005711 ORTHO05D007125 4.6e-163 579.3 1027 37.7
Phvul.001G135900 Phaseolus vulgaris HOM05D005711 ORTHO05D007125 1.3e-162 577.8 1093 35.5
Glyma.19G141900 Glycine max HOM05D005711 ORTHO05D007125 3.0e-162 576.6 1094 35.6
AUR62026001 Chenopodium quinoa HOM05D005711 ORTHO05D007125 8.7e-162 575.1 1049 36.2
Carub.0005s2441 Capsella rubella HOM05D005711 ORTHO05D007125 1.6e-160 570.9 1083 35.2
Lj2C380T2 Lonicera japonica HOM05D005711 ORTHO05D007125 1.6e-160 570.9 796 44.2
Aqoxy7G01800 Aquilegia oxysepala HOM05D005711 ORTHO05D007125 3.7e-160 569.7 1113 34.5
AT3G57570 Arabidopsis thaliana HOM05D005711 ORTHO05D007125 6.3e-160 568.9 1086 35.4
arahy.Tifrunner.gnm1.ann1.7A57YA Arachis hypogaea HOM05D005711 ORTHO05D007125 2.4e-159 567.0 1099 35.5
PGR004G1983 Punica granatum HOM05D005711 ORTHO05D007125 3.4e-158 563.1 1003 37.1
BraA09t40497Z Brassica rapa HOM05D005711 ORTHO05D007125 4.5e-158 562.8 1086 34.9
TPR.G3825 Trifolium pratense HOM05D005711 ORTHO05D007125 2.9e-157 560.1 1040 35.3
arahy.Tifrunner.gnm1.ann1.FZG2LY Arachis hypogaea HOM05D005711 ORTHO05D007125 3.8e-157 559.7 1099 35.3
PSO782G5466 Papaver somniferum HOM05D005711 ORTHO05D007125 5.5e-156 555.8 1092 34.9
A09p50460 Brassica napus HOM05D005711 ORTHO05D007125 1.1e-153 548.1 1088 34.5
Rhsim03G0016500 Rhododendron simsii HOM05D005711 ORTHO05D007125 5.7e-153 545.8 743 43.7
CsaV3_4G031330 Cucumis sativus L. HOM05D005711 ORTHO05D007125 3.7e-152 543.1 1098 33.4
Sed0005844 Sechium edule HOM05D005711 ORTHO05D007125 4.8e-152 542.7 1095 33.9
Psat3g071760 Pisum sativum HOM05D005711 ORTHO05D007125 1.8e-151 540.8 1095 34.2
Sc25g0005260 Simmondsia chinensis HOM05D005711 ORTHO05D007125 7.7e-150 535.4 1029 36.0
Nitab4.5_0005201g0010 Nicotiana tabacum HOM05D005711 ORTHO05D007125 1.7e-149 534.3 288 95.5
Aa31LG10G12390 Aethionema arabicum HOM05D005711 ORTHO05D007125 2.5e-148 530.4 1045 34.5
C08p33160 Brassica napus HOM05D005711 ORTHO05D007125 6.1e-147 525.8 1111 32.9
BolC8t50918H Brassica oleracea HOM05D005711 ORTHO05D007125 6.1e-147 525.8 1111 32.9
COL.COLO4_28164 Corchorus olitorius HOM05D005711 ORTHO05D007125 7.9e-147 525.4 777 41.6
Cpa.g.sc92.19 Carica papaya HOM05D005711 ORTHO05D007125 1.8e-143 514.2 719 42.6
Eucgr.A02387 Eucalyptus grandis HOM05D005711 ORTHO05D007125 3.8e-141 506.5 724 41.4
Gohir.D01G186800 Gossypium hirsutum HOM05D005711 ORTHO05D007125 8.0e-139 498.8 911 36.1
SalBow6G5243 Salvia bowleyana HOM05D005711 ORTHO05D007125 1.5e-137 494.6 1084 34.0
Ah.13g076290 Amaranthus hybridus HOM05D005711 ORTHO05D007125 6.3e-136 489.2 1137 32.4
EL10Ac3g07027 Beta vulgaris HOM05D005711 ORTHO05D007125 2.4e-135 487.3 1103 31.6
MELO3C009042.2 Cucumis melo HOM05D005711 ORTHO05D007125 5.0e-133 479.6 1126 30.6
ATR0605G192 Amborella trichopoda HOM05D005711 ORTHO05D007125 4.7e-131 473.0 1129 31.0
CDE10G0401 Ceratophyllum demersum HOM05D005711 ORTHO05D007125 1.0e-130 471.9 1114 31.3
PGSC0003DMG402011958 Solanum tuberosum HOM05D005711 ORTHO05D007125 5.2e-130 469.5 282 86.5
Nitab4.5_0010669g0020 Nicotiana tabacum HOM05D005711 ORTHO05D007125 1.4e-127 461.5 360 73.3
Solyc03g063700.1 Solanum lycopersicum HOM05D005711 ORTHO05D007125 5.0e-125 453.0 349 70.8
Sp5g05020 Schrenkiella parvula HOM05D005711 ORTHO05D007125 3.3e-116 423.7 960 31.6
AUR62024408 Chenopodium quinoa HOM05D005711 ORTHO05D007125 3.7e-112 410.2 743 35.8
FAN27G3244 Fragaria x ananassa HOM05D005711 ORTHO05D007125 1.6e-107 394.8 877 30.7
Thhalv10005777m.g Eutrema salsugineum HOM05D005711 ORTHO05D007125 5.8e-105 386.3 884 31.3
Rhsim03G0016100 Rhododendron simsii HOM05D005711 ORTHO05D007125 2.5e-100 370.9 454 46.7
Rhsim03G0017400 Rhododendron simsii HOM05D005711 ORTHO05D007125 3.3e-100 370.5 748 34.4
Atru.chr1.1044 Acer truncatum HOM05D005711 ORTHO05D007125 1.8e-98 364.8 754 33.3
BcaC07g40362 Brassica carinata HOM05D005711 ORTHO05D007125 4.7e-91 340.1 954 28.0
ClCG04G000840 Citrullus lanatus HOM05D005711 ORTHO05D007125 3.7e-88 330.5 434 44.2
vmacro07878 Vaccinium macrocarpon HOM05D005711 ORTHO05D007125 1.7e-80 305.1 335 49.6
Rhsim05G0135200 Rhododendron simsii HOM05D005711 ORTHO05D007125 9.3e-79 299.3 919 29.6
CARHR167810 Cardamine hirsuta HOM05D005711 ORTHO05D007125 4.3e-76 290.4 325 49.8
vmacro22370 Vaccinium macrocarpon HOM05D005711 ORTHO05D007125 3.1e-74 284.3 543 34.6
Pp3c13_4080 Physcomitrium patens HOM05D005711 ORTHO05D007125 1.3e-72 278.9 740 29.1
CARHR167800 Cardamine hirsuta HOM05D005711 ORTHO05D007125 2.2e-72 278.1 742 28.8
FvH4_7g07942 Fragaria vesca HOM05D005711 ORTHO05D007125 5.4e-71 273.5 516 33.5
Mapoly0169s0013 Marchantia polymorpha HOM05D005711 ORTHO05D007125 3.8e-64 250.8 964 24.3
FAN01G1916 Fragaria x ananassa HOM05D005711 ORTHO05D007125 1.6e-62 245.4 394 37.6
vmacro07877 Vaccinium macrocarpon HOM05D005711 ORTHO05D007125 9.3e-55 219.5 309 42.4
Sabra06G0038400 Salix brachista HOM05D005711 ORTHO05D007125 2.4e-50 204.9 225 49.3
Dinv01671 Davidia involucrata HOM05D005711 ORTHO05D007125 3.8e-48 197.6 172 57.0
Lj2A380T68 Lonicera japonica HOM05D005711 ORTHO05D007125 5.0e-48 197.2 195 52.8
ClCG04G000850 Citrullus lanatus HOM05D005711 ORTHO05D007125 4.6e-46 190.7 646 26.2
PGSC0003DMG401011958 Solanum tuberosum HOM05D005711 ORTHO05D007125 8.7e-45 186.4 143 66.4
Thecc.05G160900 Theobroma cacao HOM05D005711 ORTHO05D007125 4.8e-43 180.6 334 35.0
SEGI_00323 Sequoiadendron giganteum HOM05D005711 ORTHO05D007125 3.1e-42 177.9 253 39.5
Rhsim03G0014800 Rhododendron simsii HOM05D005711 ORTHO05D007125 1.1e-39 169.5 462 30.3
Hma1.2p1_0247F.1_g101860 Hydrangea macrophylla HOM05D005711 ORTHO05D007125 1.6e-38 165.6 164 53.7
Cpa.g.sc92.20 Carica papaya HOM05D005711 ORTHO05D010193 7.9e-38 163.3 220 40.5
SMO356G0176 Selaginella moellendorffii HOM05D005711 ORTHO05D007125 1.8e-37 162.2 306 35.6
BcaC07g40361 Brassica carinata HOM05D005711 ORTHO05D007125 4.8e-35 154.1 134 58.2
COL.COLO4_28165 Corchorus olitorius HOM05D005711 ORTHO05D007125 1.3e-27 129.4 158 43.7
AUR62024409 Chenopodium quinoa HOM05D005711 ORTHO05D007125 1.7e-24 119.0 136 50.0
CBR_g41427 Chara braunii HOM05D005711 ORTHO05D007125 2.5e-23 115.2 451 23.7
Nitab4.5_0010669g0030 Nicotiana tabacum HOM05D005711 ORTHO05D007125 3.6e-22 111.3 135 49.6
SalBow4G0785 Salvia bowleyana HOM05D005711 ORTHO05D007125 3.6e-22 111.3 137 43.8
Rhsim03G0097300 Rhododendron simsii HOM05D005711 ORTHO05D007125 3.7e-19 101.3 321 29.6
FvH4_7g07941 Fragaria vesca HOM05D005711 ORTHO05D007125 1.8e-18 99.0 136 44.9
FvH4_7g07943 Fragaria vesca HOM05D005711 ORTHO05D007125 2.2e-16 92.0 106 43.4
FAN10G0844 Fragaria x ananassa HOM05D005711 ORTHO05D007125 2.2e-16 92.0 106 43.4
FAN06G4049 Fragaria x ananassa HOM05D005711 ORTHO05D007125 1.1e-15 89.7 106 42.5
SEGI_36353 Sequoiadendron giganteum HOM05D005711 ORTHO05D007125 1.5e-12 79.3 230 25.2
Rhsim03G0016400 Rhododendron simsii HOM05D005711 ORTHO05D007125 2.7e-09 68.6 84 51.2
FAN26G1840 Fragaria x ananassa HOM05D005711 ORTHO05D007125 2.1e-06 58.9 55 43.6


User provided reference genes

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