Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002507g0060 Nicotiana tabacum HOM05D000327 ORTHO05D000218 5.3e-99 364.4 187 100.0
Nitab4.5_0005428g0030 Nicotiana tabacum HOM05D000327 ORTHO05D000218 2.7e-63 245.7 155 81.9
Nitab4.5_0002507g0010 Nicotiana tabacum HOM05D000327 ORTHO05D000218 5.5e-56 221.5 151 78.1
PGSC0003DMG400027818 Solanum tuberosum HOM05D000327 ORTHO05D000218 7.0e-35 151.4 164 55.5
Peaxi162Scf01279g00015 Petunia axillaris HOM05D000327 ORTHO05D000218 7.8e-34 147.9 156 57.7
Nitab4.5_0002458g0010 Nicotiana tabacum HOM05D000327 ORTHO05D000218 8.6e-33 144.4 99 74.7
Sopen03g001970 Solanum pennellii HOM05D000327 ORTHO05D000218 2.5e-32 142.9 160 55.6
Solyc03g005970.4 Solanum lycopersicum HOM05D000327 ORTHO05D000218 4.3e-32 142.1 159 56.6
Nitab4.5_0005428g0080 Nicotiana tabacum HOM05D000327 ORTHO05D000218 1.5e-29 133.7 96 72.9
Peaxi162Scf01279g00022 Petunia axillaris HOM05D000327 ORTHO05D000218 5.8e-29 131.7 155 49.7
Peaxi162Scf01055g00214 Petunia axillaris HOM05D000327 ORTHO05D000218 1.3e-20 104.0 105 54.3
Cc06_g12760 Coffea canephora HOM05D000327 ORTHO05D000218 8.6e-17 91.3 154 37.0
Ciclev10010298m.g Citrus clementina HOM05D000327 ORTHO05D000218 1.1e-16 90.9 155 36.8
Dinv25502 Davidia involucrata HOM05D000327 ORTHO05D000218 3.3e-16 89.4 170 37.6
Manes.03G045200 Manihot esculenta HOM05D000327 ORTHO05D000218 8.9e-14 81.3 173 32.4
PGR044G1674 Punica granatum HOM05D000327 ORTHO05D000218 1.5e-13 80.5 172 34.3
CAN.G1569.9 Capsicum annuum HOM05D000327 ORTHO05D000218 2.0e-13 80.1 158 37.3
Aqoxy7G04161 Aquilegia oxysepala HOM05D000327 ORTHO05D000218 7.6e-13 78.2 154 35.1
Oeu055324.1 Olea europaea HOM05D000327 ORTHO05D000218 9.9e-13 77.8 145 35.2
CANSAT56G0750 Cannabis sativa HOM05D000327 ORTHO05D000218 2.9e-12 76.3 131 35.1
PGSC0003DMG400038891 Solanum tuberosum HOM05D000327 ORTHO05D000218 2.9e-12 76.3 161 36.6
DCAR_011915 Daucus carota HOM05D000327 ORTHO05D000218 8.4e-12 74.7 160 35.0
Peaxi162Scf01055g00217 Petunia axillaris HOM05D000327 ORTHO05D000218 1.9e-11 73.6 55 61.8
TAR626G0753 Trochodendron aralioides HOM05D000327 ORTHO05D000218 1.9e-11 73.6 150 33.3
CSS0005668 Camellia sinensis var. sinensis HOM05D000327 ORTHO05D000218 9.2e-11 71.2 173 30.6
COL.COLO4_21200 Corchorus olitorius HOM05D000327 ORTHO05D000218 9.2e-11 71.2 168 32.7
Rhsim04G0115400 Rhododendron simsii HOM05D000327 ORTHO05D000218 9.2e-11 71.2 111 36.9
Rhsim07G0127100 Rhododendron simsii HOM05D000327 ORTHO05D000218 9.2e-11 71.2 158 35.4
CAN.G1569.10 Capsicum annuum HOM05D000327 ORTHO05D000218 1.6e-10 70.5 123 39.0
Actinidia09193 Actinidia chinensis HOM05D000327 ORTHO05D000218 2.7e-10 69.7 170 35.9
QL12p002130 Quercus lobata HOM05D000327 ORTHO05D000218 2.7e-10 69.7 138 34.8
vmacro14169 Vaccinium macrocarpon HOM05D000327 ORTHO05D000218 3.5e-10 69.3 156 34.6
Migut.L01597 Erythranthe guttata HOM05D000327 ORTHO05D000218 4.6e-10 68.9 98 38.8
Gohir.D05G037900 Gossypium hirsutum HOM05D000327 ORTHO05D000218 4.6e-10 68.9 164 33.5
Gorai.009G038400 Gossypium raimondii HOM05D000327 ORTHO05D000218 6.0e-10 68.6 164 33.5
RcHm_v2.0_Chr2g0096051 Rosa chinensis HOM05D000327 ORTHO05D000218 6.0e-10 68.6 164 33.5
TWI63G1013 Tripterygium wilfordii HOM05D000327 ORTHO05D000218 6.0e-10 68.6 165 32.1
GSVIVG01015008001 Vitis vinifera HOM05D000327 ORTHO05D000218 6.0e-10 68.6 160 29.4
Aqoxy7G04160 Aquilegia oxysepala HOM05D000327 ORTHO05D000218 7.8e-10 68.2 139 37.4
Nitab4.5_0002507g0050 Nicotiana tabacum HOM05D000327 ORTHO05D000218 7.8e-10 68.2 47 63.8
Nitab4.5_0005428g0090 Nicotiana tabacum HOM05D000327 ORTHO05D000218 7.8e-10 68.2 51 58.8
MSTRG.10486 Avicennia marina HOM05D000327 ORTHO05D000218 1.0e-09 67.8 163 33.7
FAN23G1569 Fragaria x ananassa HOM05D000327 ORTHO05D000218 1.0e-09 67.8 90 46.7
PSO421G0118 Papaver somniferum HOM05D000327 ORTHO05D000218 1.3e-09 67.4 121 38.0
MD02G1103700 Malus domestica HOM05D000327 ORTHO05D000218 3.0e-09 66.2 162 32.7
Ciclev10003252m.g Citrus clementina HOM05D000327 ORTHO05D000218 3.9e-09 65.9 155 27.7
Aa31LG5G9420 Aethionema arabicum HOM05D000327 ORTHO05D000218 5.1e-09 65.5 89 34.8
SalBow6G1561 Salvia bowleyana HOM05D000327 ORTHO05D000218 5.1e-09 65.5 158 29.7
SalBow6G3378 Salvia bowleyana HOM05D000327 ORTHO05D000218 5.1e-09 65.5 158 29.7
Potri.018G064400 Populus trichocarpa HOM05D000327 ORTHO05D000218 6.6e-09 65.1 159 33.3
THA.LOC104819453 Tarenaya hassleriana HOM05D000327 ORTHO05D000218 6.6e-09 65.1 173 27.7
TWI59G1174 Tripterygium wilfordii HOM05D000327 ORTHO05D000218 6.6e-09 65.1 137 38.0
MD15G1224200 Malus domestica HOM05D000327 ORTHO05D000218 8.6e-09 64.7 151 32.5
FvH4_7g07220 Fragaria vesca HOM05D000327 ORTHO05D000218 1.1e-08 64.3 124 35.5
Gohir.A05G036400 Gossypium hirsutum HOM05D000327 ORTHO05D000218 1.1e-08 64.3 167 32.3
vmacro08991 Vaccinium macrocarpon HOM05D000327 ORTHO05D000218 2.5e-08 63.2 41 63.4
DCAR_027146 Daucus carota HOM05D000327 ORTHO05D000218 3.3e-08 62.8 96 38.5
FvH4_1g09490 Fragaria vesca HOM05D000327 ORTHO05D000218 3.3e-08 62.8 100 39.0
FAN19G0157 Fragaria x ananassa HOM05D002094 ORTHO05D002113 3.3e-08 62.8 100 39.0
FAN26G0328 Fragaria x ananassa HOM05D000259 ORTHO05D000155 3.3e-08 62.8 100 39.0
Prupe.7G191300 Prunus persica HOM05D000327 ORTHO05D000218 3.3e-08 62.8 55 49.1
SGA_v2.0_scaffold55G19873 Striga asiatica HOM05D000327 ORTHO05D000218 3.3e-08 62.8 66 47.0
Eucgr.C03193 Eucalyptus grandis HOM05D000327 ORTHO05D000218 4.3e-08 62.4 166 27.7
SalBow5G5495 Salvia bowleyana HOM05D000327 ORTHO05D000218 4.3e-08 62.4 91 39.6
unitig_899.g15180 Utricularia gibba HOM05D000327 ORTHO05D000218 4.3e-08 62.4 41 58.5
Atru.chr7.1777 Acer truncatum HOM05D000327 ORTHO05D000218 5.6e-08 62.0 128 32.8
Carub.0004s0636 Capsella rubella HOM05D000327 ORTHO05D000218 7.3e-08 61.6 148 33.1
Ciclev10003456m.g Citrus clementina HOM05D000327 ORTHO05D000218 7.3e-08 61.6 156 28.2
FAN21G0545 Fragaria x ananassa HOM05D000327 ORTHO05D000218 7.3e-08 61.6 102 39.2
TPR.G31077 Trifolium pratense HOM05D000327 ORTHO05D000218 7.3e-08 61.6 110 34.5
FAN21G2760 Fragaria x ananassa HOM05D000327 ORTHO05D000218 1.2e-07 60.8 110 37.3
EL10Ac8g18961 Beta vulgaris HOM05D000327 ORTHO05D000218 1.6e-07 60.5 169 32.5
Eucgr.C03190 Eucalyptus grandis HOM05D000327 ORTHO05D000218 1.6e-07 60.5 107 32.7
SHI27980 Sapria himalayana HOM05D000327 ORTHO05D000218 1.6e-07 60.5 149 28.9
FAN26G1366 Fragaria x ananassa HOM05D000259 ORTHO05D000155 2.1e-07 60.1 100 38.0
MD03G1111900 Malus domestica HOM05D000327 ORTHO05D000218 2.1e-07 60.1 50 54.0
Manes.03G045100 Manihot esculenta HOM05D000327 ORTHO05D000218 2.1e-07 60.1 110 34.5
PSO135G1000 Papaver somniferum HOM05D000327 ORTHO05D000218 2.1e-07 60.1 47 53.2
FvH4_1g09510 Fragaria vesca HOM05D000327 ORTHO05D000218 2.8e-07 59.7 41 56.1
FAN19G2624 Fragaria x ananassa HOM05D000327 ORTHO05D000218 2.8e-07 59.7 41 56.1
FAN23G1355 Fragaria x ananassa HOM05D000327 ORTHO05D000218 2.8e-07 59.7 41 53.7
FAN26G2072 Fragaria x ananassa HOM05D000327 ORTHO05D000218 2.8e-07 59.7 41 56.1
SalBow5G3064 Salvia bowleyana HOM05D000327 ORTHO05D000218 2.8e-07 59.7 94 36.2
CARHR184780 Cardamine hirsuta HOM05D000327 ORTHO05D000218 3.6e-07 59.3 41 53.7
FAN25G1288 Fragaria x ananassa HOM05D000327 ORTHO05D000218 3.6e-07 59.3 110 37.3
Lj7A693T93 Lonicera japonica HOM05D000327 ORTHO05D000218 3.6e-07 59.3 41 61.0
A09p55200 Brassica napus HOM05D000327 ORTHO05D000218 4.7e-07 58.9 41 53.7
BraA09t40928Z Brassica rapa HOM05D000327 ORTHO05D000218 4.7e-07 58.9 41 53.7
AUR62025334 Chenopodium quinoa HOM05D000327 ORTHO05D000218 4.7e-07 58.9 41 58.5
FvH4_3g03010 Fragaria vesca HOM05D000327 ORTHO05D000218 4.7e-07 58.9 108 36.1
Medtr2g044250 Medicago truncatula HOM05D000327 ORTHO05D000218 4.7e-07 58.9 45 48.9
BcaC07g40821 Brassica carinata HOM05D000327 ORTHO05D000218 6.2e-07 58.5 41 53.7
C08p38140 Brassica napus HOM05D000327 ORTHO05D000218 6.2e-07 58.5 41 53.7
BolC8t51389H Brassica oleracea HOM05D000327 ORTHO05D000218 6.2e-07 58.5 41 53.7
Duzib168G1039 Durio zibethinus HOM05D000327 ORTHO05D000218 6.2e-07 58.5 162 32.7
Thhalv10000966m.g Eutrema salsugineum HOM05D000327 ORTHO05D000218 6.2e-07 58.5 96 35.4
FAN26G1720 Fragaria x ananassa HOM05D000327 ORTHO05D000218 6.2e-07 58.5 121 32.2
Rhsim04G0115500 Rhododendron simsii HOM05D000327 ORTHO05D000218 6.2e-07 58.5 130 30.8
TAR383G0998 Trochodendron aralioides HOM05D000327 ORTHO05D000218 6.2e-07 58.5 161 31.1
Eucgr.C03191 Eucalyptus grandis HOM05D000327 ORTHO05D000218 8.1e-07 58.2 73 38.4
FvH4_1g09500 Fragaria vesca HOM05D000327 ORTHO05D000218 8.1e-07 58.2 43 53.5
FvH4_3g00870 Fragaria vesca HOM05D000327 ORTHO05D000218 8.1e-07 58.2 102 38.2
ATR0099G091 Amborella trichopoda HOM05D000327 ORTHO05D000218 1.1e-06 57.8 98 34.7
arahy.Tifrunner.gnm1.ann1.6STX6Z Arachis hypogaea HOM05D000327 ORTHO05D000218 1.1e-06 57.8 41 53.7
BcaB08g35330 Brassica carinata HOM05D000327 ORTHO05D000218 1.1e-06 57.8 148 29.7
Ciclev10010720m.g Citrus clementina HOM05D000327 ORTHO05D000218 1.1e-06 57.8 41 53.7
AT3G53690 Arabidopsis thaliana HOM05D000327 ORTHO05D000218 1.4e-06 57.4 150 31.3
Lj6g0018182 Lotus japonicus HOM05D000327 ORTHO05D000218 1.4e-06 57.4 48 50.0
Sp4g07320 Schrenkiella parvula HOM05D000327 ORTHO05D000218 1.4e-06 57.4 155 29.0
Sc08g0009200 Simmondsia chinensis HOM05D000327 ORTHO05D000218 1.8e-06 57.0 41 56.1
Thecc.09G069700 Theobroma cacao HOM05D000327 ORTHO05D000218 1.8e-06 57.0 39 56.4
arahy.Tifrunner.gnm1.ann1.NE9TLW Arachis hypogaea HOM05D000327 ORTHO05D000218 2.4e-06 56.6 42 54.8
Ciclev10009160m.g Citrus clementina HOM05D000327 ORTHO05D000218 2.4e-06 56.6 41 56.1
FAN23G3113 Fragaria x ananassa HOM05D000327 ORTHO05D000218 2.4e-06 56.6 153 30.1
TWI34G0412 Tripterygium wilfordii HOM05D000327 ORTHO05D000218 2.4e-06 56.6 42 52.4
Lalb_Chr17g0343331 Lupinus albus HOM05D000327 ORTHO05D000218 3.1e-06 56.2 51 41.2
Psat1g138280 Pisum sativum HOM05D000327 ORTHO05D000218 3.1e-06 56.2 114 30.7
arahy.Tifrunner.gnm1.ann1.93SQK7 Arachis hypogaea HOM05D000327 ORTHO05D000218 4.0e-06 55.8 41 53.7
arahy.Tifrunner.gnm1.ann1.C5S9N3 Arachis hypogaea HOM05D000327 ORTHO05D000218 4.0e-06 55.8 41 53.7
arahy.Tifrunner.gnm1.ann1.H6P3X0 Arachis hypogaea HOM05D000327 ORTHO05D000218 4.0e-06 55.8 154 27.9
arahy.Tifrunner.gnm1.ann1.K5Q7B4 Arachis hypogaea HOM05D000327 ORTHO05D000218 4.0e-06 55.8 41 53.7
Lj4g0013845 Lotus japonicus HOM05D000327 ORTHO05D000218 4.0e-06 55.8 63 39.7
MD15G1224100 Malus domestica HOM05D000327 ORTHO05D000218 4.0e-06 55.8 47 48.9
AL5G34660 Arabidopsis lyrata HOM05D000327 ORTHO05D000218 5.2e-06 55.5 149 28.2
arahy.Tifrunner.gnm1.ann1.XA1YL7 Arachis hypogaea HOM05D000327 ORTHO05D000218 5.2e-06 55.5 44 52.3
DCAR_011913 Daucus carota HOM05D000411 ORTHO05D000218 5.2e-06 55.5 41 56.1
Atru.chr7.1773 Acer truncatum HOM05D000327 ORTHO05D000218 6.8e-06 55.1 44 40.9
Atru.chr7.1774 Acer truncatum HOM05D000327 ORTHO05D000218 6.8e-06 55.1 41 46.3
arahy.Tifrunner.gnm1.ann1.4DU4Q1 Arachis hypogaea HOM05D000327 ORTHO05D000218 6.8e-06 55.1 41 51.2
Nn8g38525 Nelumbo nucifera HOM05D000327 ORTHO05D000218 6.8e-06 55.1 63 38.1
Prupe.7G191400 Prunus persica HOM05D000327 ORTHO05D000218 6.8e-06 55.1 44 47.7
RcHm_v2.0_Chr2g0096061 Rosa chinensis HOM05D000327 ORTHO05D000218 6.8e-06 55.1 39 56.4
RcHm_v2.0_Chr5g0001301 Rosa chinensis HOM05D000327 ORTHO05D000218 6.8e-06 55.1 95 37.9
TPR.G36737 Trifolium pratense HOM05D000327 ORTHO05D000218 6.8e-06 55.1 45 48.9
Medtr2g044260 Medicago truncatula HOM05D000327 ORTHO05D000218 8.9e-06 54.7 41 48.8
Phvul.009G223300 Phaseolus vulgaris HOM05D000327 ORTHO05D000218 8.9e-06 54.7 86 36.0
Psat6g210600 Pisum sativum HOM05D000327 ORTHO05D000218 8.9e-06 54.7 132 28.0
Prupe.7G191200 Prunus persica HOM05D000327 ORTHO05D000218 8.9e-06 54.7 97 33.0
Rhsim04G0115600 Rhododendron simsii HOM05D000327 ORTHO05D000218 8.9e-06 54.7 41 53.7
Sabra18G0057100 Salix brachista HOM05D000327 ORTHO05D000218 8.9e-06 54.7 137 32.1


User provided reference genes

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