Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002484g0050 Nicotiana tabacum HOM05D006958 ORTHO05D008814 1.7e-188 662.5 331 100.0
Nitab4.5_0004654g0020 Nicotiana tabacum HOM05D006958 ORTHO05D008814 4.7e-183 644.4 331 97.3
Sopen04g031420 Solanum pennellii HOM05D006958 ORTHO05D008814 2.3e-166 589.0 331 89.1
Solyc04g077820.4 Solanum lycopersicum HOM05D006958 ORTHO05D008814 1.2e-165 586.6 331 88.8
PGSC0003DMG400010608 Solanum tuberosum HOM05D006958 ORTHO05D008814 5.9e-162 574.3 344 85.5
CAN.G724.27 Capsicum annuum HOM05D006958 ORTHO05D008814 2.7e-154 548.9 324 85.2
Peaxi162Scf00081g02114 Petunia axillaris HOM05D006958 ORTHO05D008814 2.4e-139 499.2 333 77.5
Rhsim06G0062400 Rhododendron simsii HOM05D006958 ORTHO05D008814 2.3e-121 439.5 341 64.5
CSS0020437 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 3.3e-120 435.6 344 66.3
Actinidia10201 Actinidia chinensis HOM05D006958 ORTHO05D008814 1.6e-119 433.3 339 63.7
Dinv39219 Davidia involucrata HOM05D006958 ORTHO05D008814 2.1e-119 433.0 342 64.0
SGA_v2.0_scaffold28G11833 Striga asiatica HOM05D006958 ORTHO05D008814 1.8e-118 429.9 332 66.3
CSS0026693 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 1.7e-116 423.3 344 65.4
Actinidia22696 Actinidia chinensis HOM05D006958 ORTHO05D008814 3.8e-116 422.2 339 61.9
MSTRG.24376 Avicennia marina HOM05D006958 ORTHO05D008814 5.5e-115 418.3 334 65.9
Manes.18G046700 Manihot esculenta HOM05D006958 ORTHO05D008814 4.6e-114 415.2 339 63.4
Migut.N02783 Erythranthe guttata HOM05D006958 ORTHO05D008814 6.0e-114 414.8 335 63.0
Thecc.08G088500 Theobroma cacao HOM05D006958 ORTHO05D008814 2.1e-111 406.4 340 62.4
COL.COLO4_28503 Corchorus olitorius HOM05D006958 ORTHO05D008814 2.8e-111 406.0 342 63.5
Prupe.1G422600 Prunus persica HOM05D006958 ORTHO05D008814 1.1e-110 404.1 343 60.3
Duzib093G1923 Durio zibethinus HOM05D006958 ORTHO05D008814 2.0e-109 399.8 340 62.1
Potri.002G118300 Populus trichocarpa HOM05D006958 ORTHO05D008814 2.6e-109 399.4 336 61.0
CANSAT25G3409 Cannabis sativa HOM05D006958 ORTHO05D008814 7.6e-109 397.9 338 60.4
Cfa013775 Carpinus fangiana HOM05D006958 ORTHO05D008814 1.3e-108 397.1 344 60.2
Atru.chr13.835 Acer truncatum HOM05D006958 ORTHO05D008814 1.7e-108 396.7 342 61.1
Gorai.009G220300 Gossypium raimondii HOM05D006958 ORTHO05D008814 4.9e-108 395.2 342 60.2
Haze_22433 Corylus avellana HOM05D006958 ORTHO05D008814 1.4e-107 393.7 344 59.0
TAR376G0445 Trochodendron aralioides HOM05D006958 ORTHO05D008814 2.5e-107 392.9 351 57.8
Ciclev10001733m.g Citrus clementina HOM05D006958 ORTHO05D008814 3.2e-107 392.5 340 60.6
Lsat_1_v5_gn_6_110920 Lactuca sativa HOM05D006958 ORTHO05D008814 7.1e-107 391.3 347 59.7
RcHm_v2.0_Chr6g0309651 Rosa chinensis HOM05D006958 ORTHO05D008814 7.1e-107 391.3 340 58.5
HanXRQChr08g0229631 Helianthus annuus HOM05D006958 ORTHO05D008814 9.3e-107 391.0 340 63.2
TWI12G1073 Tripterygium wilfordii HOM05D006958 ORTHO05D008814 1.2e-106 390.6 346 59.8
Gohir.D05G213600 Gossypium hirsutum HOM05D006958 ORTHO05D008814 4.6e-106 388.7 342 59.4
MD15G1069100 Malus domestica HOM05D006958 ORTHO05D008814 1.3e-105 387.1 344 59.3
FAN27G0228 Fragaria x ananassa HOM05D006958 ORTHO05D008814 5.7e-104 381.7 343 58.0
FAN15G0662 Fragaria x ananassa HOM05D006958 ORTHO05D008814 7.4e-104 381.3 341 58.1
CiPaw.07G174600 Carya illinoinensis HOM05D006958 ORTHO05D008814 9.6e-104 380.9 344 57.6
FvH4_2g33060 Fragaria vesca HOM05D006958 ORTHO05D008814 1.3e-103 380.6 339 59.0
FAN24G2490 Fragaria x ananassa HOM05D006958 ORTHO05D008814 1.8e-102 376.7 343 58.3
THA.LOC104816754 Tarenaya hassleriana HOM05D006958 ORTHO05D008814 1.8e-102 376.7 336 57.1
ClCG08G016520 Citrullus lanatus HOM05D006958 ORTHO05D008814 5.9e-101 371.7 343 58.9
MBI16_g23890_MAGBIO Magnolia biondii HOM05D006958 ORTHO05D008814 1.7e-100 370.2 343 56.3
Lalb_Chr14g0368181 Lupinus albus HOM05D006958 ORTHO05D008814 2.2e-100 369.8 330 58.8
FAN20G1263 Fragaria x ananassa HOM05D006958 ORTHO05D008814 2.9e-100 369.4 355 56.3
arahy.Tifrunner.gnm1.ann1.JFD9T8 Arachis hypogaea HOM05D006958 ORTHO05D008814 8.4e-100 367.9 328 57.6
Sed0002112 Sechium edule HOM05D006958 ORTHO05D008814 8.4e-100 367.9 339 57.8
Sc02g0007890 Simmondsia chinensis HOM05D006958 ORTHO05D008814 8.4e-100 367.9 335 57.9
PSO675G0096 Papaver somniferum HOM05D006958 ORTHO05D008814 1.4e-99 367.1 350 54.6
Lj4A758G77 Lonicera japonica HOM05D006958 ORTHO05D008814 4.2e-99 365.5 378 53.7
CARHR283790 Cardamine hirsuta HOM05D006958 ORTHO05D008814 7.2e-99 364.8 344 56.4
PSO541G2153 Papaver somniferum HOM05D006958 ORTHO05D008814 2.1e-98 363.2 347 55.3
Carub.0002s0585 Capsella rubella HOM05D006958 ORTHO05D008814 6.1e-98 361.7 338 56.5
Thhalv10023590m.g Eutrema salsugineum HOM05D006958 ORTHO05D008814 1.3e-97 360.5 340 55.6
QL12p038133 Quercus lobata HOM05D006958 ORTHO05D008814 1.3e-97 360.5 340 55.6
AT1G59600 Arabidopsis thaliana HOM05D006958 ORTHO05D008814 3.0e-97 359.4 338 55.6
Hund05299 Selenicereus undatus HOM05D006958 ORTHO05D008814 5.1e-97 358.6 347 55.3
AL2G17470 Arabidopsis lyrata HOM05D006958 ORTHO05D008814 1.9e-96 356.7 338 55.6
C01p36350 Brassica napus HOM05D006958 ORTHO05D008814 1.9e-96 356.7 333 55.0
BolC1t03593H Brassica oleracea HOM05D006958 ORTHO05D008814 9.7e-96 354.4 334 55.1
unitig_744.g24127 Utricularia gibba HOM05D006958 ORTHO05D008814 1.3e-95 354.0 311 57.2
CsaV3_2G026090 Cucumis sativus L. HOM05D006958 ORTHO05D008814 1.6e-95 353.6 342 57.0
ECA246G2880 Erigeron canadensis HOM05D006958 ORTHO05D008814 2.8e-95 352.8 276 65.6
A01p28700 Brassica napus HOM05D006958 ORTHO05D008814 4.8e-95 352.1 336 53.9
Sp2g04980 Schrenkiella parvula HOM05D006958 ORTHO05D008814 8.2e-95 351.3 341 54.3
DCAR_020049 Daucus carota HOM05D006958 ORTHO05D008814 1.1e-94 350.9 331 56.5
BraA01t03033Z Brassica rapa HOM05D006958 ORTHO05D008814 4.1e-94 349.0 336 53.6
MELO3C010802.2 Cucumis melo HOM05D006958 ORTHO05D008814 1.2e-93 347.4 340 56.5
Cpa.g.sc142.28 Carica papaya HOM05D006958 ORTHO05D008814 2.0e-93 346.7 276 63.0
Eucgr.F02250 Eucalyptus grandis HOM05D006958 ORTHO05D008814 3.4e-93 345.9 347 51.6
Gohir.A05G210300 Gossypium hirsutum HOM05D006958 ORTHO05D008814 7.7e-93 344.7 276 64.1
PGR031G1511 Punica granatum HOM05D006958 ORTHO05D008814 6.5e-92 341.7 338 52.1
Aqoxy6G02602 Aquilegia oxysepala HOM05D006958 ORTHO05D008814 3.6e-90 335.9 342 53.5
Lj5g0000926 Lotus japonicus HOM05D006958 ORTHO05D008814 1.0e-89 334.3 332 53.0
BcaB04g20216 Brassica carinata HOM05D006958 ORTHO05D008814 1.8e-89 333.6 340 51.2
Aa31LG2G10550 Aethionema arabicum HOM05D006958 ORTHO05D008814 5.1e-89 332.0 428 44.2
ATR0739G011 Amborella trichopoda HOM05D006958 ORTHO05D008814 1.5e-88 330.5 343 52.5
PSO541G3524 Papaver somniferum HOM05D006958 ORTHO05D008814 3.3e-88 329.3 342 51.5
arahy.Tifrunner.gnm1.ann1.8TQ0W2 Arachis hypogaea HOM05D006958 ORTHO05D008814 1.7e-87 327.0 328 53.0
EL10Ac1g02379 Beta vulgaris HOM05D006958 ORTHO05D008814 8.2e-87 324.7 273 59.7
Ca_13215_v3 Cicer arietinum L. HOM05D006958 ORTHO05D008814 2.4e-86 323.2 338 52.7
HPP92_009523 Vanilla planifolia HOM05D006958 ORTHO05D008814 4.1e-86 322.4 323 51.4
TPR.G37796 Trifolium pratense HOM05D006958 ORTHO05D008814 1.2e-85 320.9 334 53.0
Phvul.001G028000 Phaseolus vulgaris HOM05D006958 ORTHO05D008814 2.6e-85 319.7 325 53.5
Glyma.14G089018 Glycine max HOM05D006958 ORTHO05D008814 5.9e-85 318.5 324 54.3
VMungo0647G0836 Vigna mungo HOM05D006958 ORTHO05D008814 1.1e-83 314.3 289 55.4
Zm00001eb325900 Zea mays HOM05D006958 ORTHO05D008814 4.8e-79 298.9 336 49.4
Medtr1g018000 Medicago truncatula HOM05D006958 ORTHO05D008814 1.1e-75 287.7 333 50.8
Cc10_g05800 Coffea canephora HOM05D006958 ORTHO05D008814 3.7e-71 272.7 210 66.7
GSVIVG01009341001 Vitis vinifera HOM05D006958 ORTHO05D008814 5.0e-68 262.3 210 64.3
Oeu049903.1 Olea europaea HOM05D006958 ORTHO05D008814 3.8e-60 236.1 169 67.5
Pp3c12_1620 Physcomitrium patens HOM05D006958 ORTHO05D008814 5.4e-54 215.7 329 38.0
CDE04G0359 Ceratophyllum demersum HOM05D006958 ORTHO05D008814 7.0e-54 215.3 231 52.4
AUR62022479 Chenopodium quinoa HOM05D006958 ORTHO05D008814 5.7e-48 195.7 177 56.5
Psat6g018160 Pisum sativum HOM05D006958 ORTHO05D008814 8.0e-42 175.3 291 41.2
HPP92_009559 Vanilla planifolia HOM05D006958 ORTHO05D008814 4.9e-39 166.0 176 48.9
SMO334G0101 Selaginella moellendorffii HOM05D006958 ORTHO05D008814 1.1e-35 154.8 257 36.6
Os01g0593100 Oryza sativa ssp. japonica HOM05D006958 ORTHO05D008814 1.5e-35 154.5 196 45.4
Os07g0586000 Oryza sativa ssp. japonica HOM05D006958 ORTHO05D008814 1.8e-33 147.5 166 47.6
CBR_g51257 Chara braunii HOM05D006958 ORTHO05D008814 2.6e-32 143.7 342 32.7
SEGI_02529 Sequoiadendron giganteum HOM05D006958 ORTHO05D008814 1.9e-30 137.5 175 44.0
arahy.Tifrunner.gnm1.ann1.D1UQZZ Arachis hypogaea HOM05D006958 ORTHO05D008814 5.4e-30 136.0 265 35.5
BolC4t24190H Brassica oleracea HOM05D006958 ORTHO05D008814 4.6e-29 132.9 130 53.8
Cfa010280 Carpinus fangiana HOM05D006958 ORTHO05D008814 2.6e-24 117.1 93 61.3
C04p26140 Brassica napus HOM05D006958 ORTHO05D008814 1.7e-23 114.4 114 51.8
MBI15_g25904_MAGBIO Magnolia biondii HOM05D006958 ORTHO05D017181 8.4e-23 112.1 126 50.8
BcaC02g10644 Brassica carinata HOM05D006958 ORTHO05D008814 5.4e-22 109.4 146 41.8
AUR62022480 Chenopodium quinoa HOM05D006958 ORTHO05D008814 6.0e-21 105.9 123 48.0
Psat7g107960 Pisum sativum HOM05D006958 ORTHO05D008814 1.2e-13 81.6 125 40.8
SEGI_26692 Sequoiadendron giganteum HOM05D006958 ORTHO05D008814 4.6e-13 79.7 85 42.4
Glyma.07G264001 Glycine max HOM05D006958 ORTHO05D008814 1.3e-10 71.6 85 47.1
HPP92_009560 Vanilla planifolia HOM05D001084 ORTHO05D001275 3.1e-09 67.0 58 51.7
Psat0s3396g0160 Pisum sativum HOM05D006958 ORTHO05D008814 2.6e-08 63.9 42 66.7
Ah.09g227430 Amaranthus hybridus HOM05D006958 ORTHO05D008814 7.6e-08 62.4 65 46.2


User provided reference genes

Program Settings