Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002470g0100 Nicotiana tabacum HOM05D002674 ORTHO05D007700 8.2e-149 530.4 276 100.0
Nitab4.5_0005805g0020 Nicotiana tabacum HOM05D002674 ORTHO05D007700 5.5e-137 491.1 272 94.9
PGSC0003DMG402017938 Solanum tuberosum HOM05D002674 ORTHO05D007700 5.2e-111 404.8 279 81.7
Sopen06g003880 Solanum pennellii HOM05D002674 ORTHO05D007700 6.8e-111 404.4 279 81.4
Solyc06g009120.3 Solanum lycopersicum HOM05D002674 ORTHO05D007700 8.9e-111 404.1 279 81.4
Dinv33053 Davidia involucrata HOM05D002674 ORTHO05D007700 2.2e-85 319.7 284 64.8
Actinidia24347 Actinidia chinensis HOM05D002674 ORTHO05D007700 1.2e-78 297.4 274 62.8
Cc01_g20810 Coffea canephora HOM05D002674 ORTHO05D007700 1.5e-78 297.0 280 63.9
CSS0049735 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D007700 7.6e-78 294.7 276 64.1
Atru.chr5.1151 Acer truncatum HOM05D002674 ORTHO05D007700 1.3e-77 293.9 277 62.1
Peaxi162Scf00399g00714 Petunia axillaris HOM05D002674 ORTHO05D007700 9.3e-76 287.7 315 60.0
Manes.01G218600 Manihot esculenta HOM05D002674 ORTHO05D007700 1.2e-75 287.3 281 62.3
Prupe.8G261000 Prunus persica HOM05D002674 ORTHO05D007700 3.5e-75 285.8 287 58.9
CANSAT25G1821 Cannabis sativa HOM05D002674 ORTHO05D007700 1.0e-74 284.3 286 60.1
Ciclev10021537m.g Citrus clementina HOM05D002674 ORTHO05D007700 6.6e-74 281.6 288 59.4
Lj1A25T5 Lonicera japonica HOM05D002674 ORTHO05D007700 6.6e-74 281.6 275 62.2
MD03G1287800 Malus domestica HOM05D002674 ORTHO05D007700 1.1e-73 280.8 284 57.4
MD11G1310500 Malus domestica HOM05D002674 ORTHO05D007700 3.6e-72 275.8 282 58.5
ClCG10G010900 Citrullus lanatus HOM05D002674 ORTHO05D007700 4.0e-71 272.3 286 57.3
FAN27G2781 Fragaria x ananassa HOM05D002674 ORTHO05D007700 1.2e-70 270.8 278 57.6
Gohir.A08G075900 Gossypium hirsutum HOM05D002674 ORTHO05D007700 2.6e-70 269.6 285 58.6
Gorai.004G089800 Gossypium raimondii HOM05D002674 ORTHO05D007700 1.3e-69 267.3 285 57.9
Thecc.01G299900 Theobroma cacao HOM05D002674 ORTHO05D007700 2.2e-69 266.5 284 58.5
Glyma.02G018300 Glycine max HOM05D002674 ORTHO05D007700 2.9e-69 266.2 277 59.9
Gohir.D08G085300 Gossypium hirsutum HOM05D002674 ORTHO05D007700 2.9e-69 266.2 285 57.5
FAN24G1157 Fragaria x ananassa HOM05D002674 ORTHO05D007700 4.9e-69 265.4 278 60.1
CsaV3_4G000780 Cucumis sativus L. HOM05D002674 ORTHO05D007700 8.4e-69 264.6 283 55.5
Cfa005916 Carpinus fangiana HOM05D002674 ORTHO05D007700 1.4e-68 263.8 284 59.9
RcHm_v2.0_Chr6g0293961 Rosa chinensis HOM05D002674 ORTHO05D007700 1.4e-68 263.8 280 59.6
MELO3C017958.2 Cucumis melo HOM05D002674 ORTHO05D007700 2.4e-68 263.1 283 55.1
TAR365G1234 Trochodendron aralioides HOM05D002674 ORTHO05D007700 5.4e-68 261.9 275 58.5
FvH4_2g25690 Fragaria vesca HOM05D002674 ORTHO05D007700 7.1e-68 261.5 278 59.7
QL12p028514 Quercus lobata HOM05D002674 ORTHO05D007700 7.1e-68 261.5 306 56.9
COL.COLO4_23350 Corchorus olitorius HOM05D002674 ORTHO05D007700 9.3e-68 261.2 284 57.4
FAN20G3185 Fragaria x ananassa HOM05D002674 ORTHO05D007700 2.1e-67 260.0 278 59.4
Duzib138G1545 Durio zibethinus HOM05D002674 ORTHO05D007700 7.9e-67 258.1 286 57.7
FAN15G1012 Fragaria x ananassa HOM05D002674 ORTHO05D007700 3.9e-66 255.8 278 58.6
CSS0000533 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D007700 1.5e-65 253.8 281 57.3
Phvul.007G146100 Phaseolus vulgaris HOM05D002674 ORTHO05D007700 1.9e-65 253.4 278 57.9
CiPaw.07G108400 Carya illinoinensis HOM05D002674 ORTHO05D007700 3.3e-65 252.7 278 55.4
Duzib133G1209 Durio zibethinus HOM05D002674 ORTHO05D007700 3.3e-65 252.7 282 55.7
Lsat_1_v5_gn_9_5620 Lactuca sativa HOM05D002674 ORTHO05D007700 9.6e-65 251.1 274 59.5
HanXRQChr10g0284651 Helianthus annuus HOM05D002674 ORTHO05D007700 4.8e-64 248.8 299 53.5
TWI23G1032 Tripterygium wilfordii HOM05D002674 ORTHO05D007700 1.4e-63 247.3 275 57.1
Glyma.10G018600 Glycine max HOM05D002674 ORTHO05D007700 1.5e-62 243.8 285 55.4
Psat6g166040 Pisum sativum HOM05D002674 ORTHO05D007700 1.7e-61 240.4 274 54.0
Ca_10339_v3 Cicer arietinum L. HOM05D002674 ORTHO05D007700 2.2e-61 240.0 276 55.1
Sed0013149 Sechium edule HOM05D002674 ORTHO05D007700 6.4e-61 238.4 272 57.0
Aqoxy5G00752 Aquilegia oxysepala HOM05D002674 ORTHO05D007700 9.3e-60 234.6 292 52.7
Rhsim01G0243300 Rhododendron simsii HOM05D002674 ORTHO05D007700 1.6e-59 233.8 291 54.0
TPR.G34010 Trifolium pratense HOM05D002674 ORTHO05D007700 2.7e-59 233.0 279 55.6
Lsat_1_v5_gn_7_11800 Lactuca sativa HOM05D002674 ORTHO05D007700 2.3e-58 229.9 253 59.7
Potri.014G129500 Populus trichocarpa HOM05D002674 ORTHO05D007700 8.7e-58 228.0 281 54.8
SGA_v2.0_scaffold1G00369 Striga asiatica HOM05D002674 ORTHO05D007700 1.1e-57 227.6 277 54.5
Migut.D00215 Erythranthe guttata HOM05D002674 ORTHO05D007700 1.9e-57 226.9 277 55.2
MBI19_g25354_MAGBIO Magnolia biondii HOM05D002674 ORTHO05D007700 9.6e-57 224.6 286 52.8
TAR636G1278 Trochodendron aralioides HOM05D002674 ORTHO05D007700 2.1e-56 223.4 284 50.7
Lj5g0010238 Lotus japonicus HOM05D002674 ORTHO05D007700 2.8e-56 223.0 282 55.0
Potri.002G204700 Populus trichocarpa HOM05D002674 ORTHO05D007700 1.1e-55 221.1 279 52.3
Hma1.2p1_0491F.1_g164500 Hydrangea macrophylla HOM05D002674 ORTHO05D007700 1.4e-55 220.7 206 65.0
Medtr1g088580 Medicago truncatula HOM05D002674 ORTHO05D007700 1.8e-55 220.3 274 51.1
Eucgr.K03478 Eucalyptus grandis HOM05D002674 ORTHO05D007700 3.1e-55 219.5 291 52.6
Sabra14G0096100 Salix brachista HOM05D002674 ORTHO05D007700 4.5e-54 215.7 281 52.7
VMungo0720G0138 Vigna mungo HOM05D002674 ORTHO05D007700 5.8e-54 215.3 242 55.8
DCAR_002828 Daucus carota HOM05D002674 ORTHO05D007700 8.4e-53 211.5 267 58.4
EL10Ac7g17509 Beta vulgaris HOM05D002674 ORTHO05D007700 1.9e-52 210.3 307 48.5
CDE11G0633 Ceratophyllum demersum HOM05D002674 ORTHO05D007700 3.2e-52 209.5 277 51.3
HPP92_025205 Vanilla planifolia HOM05D002674 ORTHO05D007700 4.2e-52 209.1 273 51.6
Carub.0006s3472 Capsella rubella HOM05D002674 ORTHO05D007700 4.6e-51 205.7 275 52.7
AT4G02425 Arabidopsis thaliana HOM05D002674 ORTHO05D007700 1.0e-50 204.5 276 52.2
CAN.G1280.1 Capsicum annuum HOM05D002674 ORTHO05D007700 1.9e-49 200.3 262 57.6
Sc24g0003790 Simmondsia chinensis HOM05D002674 ORTHO05D007700 4.3e-49 199.1 294 51.4
Ah.15g093240 Amaranthus hybridus HOM05D002674 ORTHO05D007700 5.7e-49 198.7 301 47.8
CARHR250690 Cardamine hirsuta HOM05D002674 ORTHO05D007700 9.7e-49 198.0 284 50.0
Nn3g21481 Nelumbo nucifera HOM05D002674 ORTHO05D007700 2.8e-48 196.4 255 52.9
Lalb_Chr06g0163511 Lupinus albus HOM05D002674 ORTHO05D007700 3.7e-48 196.1 269 50.6
Sp6g02330 Schrenkiella parvula HOM05D002674 ORTHO05D007700 6.3e-48 195.3 275 49.5
Sabra02G0154700 Salix brachista HOM05D002674 ORTHO05D008110 8.2e-48 194.9 286 49.7
CDE05G2513 Ceratophyllum demersum HOM05D002674 ORTHO05D007700 2.4e-47 193.4 275 48.4
THA.LOC104815928 Tarenaya hassleriana HOM05D002674 ORTHO05D007700 3.1e-47 193.0 282 48.9
Thhalv10028893m.g Eutrema salsugineum HOM05D002674 ORTHO05D007700 5.3e-47 192.2 276 50.4
PSO832G4034 Papaver somniferum HOM05D002674 ORTHO05D007700 2.0e-46 190.3 296 49.3
Hund18157 Selenicereus undatus HOM05D002674 ORTHO05D007700 1.0e-45 188.0 290 47.6
AL6G50650 Arabidopsis lyrata HOM05D002674 ORTHO05D007700 6.5e-45 185.3 238 53.8
BcaC03g16124 Brassica carinata HOM05D002674 ORTHO05D007700 2.5e-44 183.3 274 48.2
C02p38980 Brassica napus HOM05D002674 ORTHO05D007700 2.5e-44 183.3 274 48.2
Oeu054122.1 Olea europaea HOM05D002674 ORTHO05D007700 3.2e-44 183.0 179 63.7
BolC2t09909H Brassica oleracea HOM05D002674 ORTHO05D007700 4.2e-44 182.6 276 48.2
BraA02t07459Z Brassica rapa HOM05D002674 ORTHO05D007700 2.7e-43 179.9 274 47.8
THA.LOC104825970 Tarenaya hassleriana HOM05D002674 ORTHO05D007700 7.9e-43 178.3 282 47.9
A02p24720 Brassica napus HOM05D002674 ORTHO05D007700 1.4e-42 177.6 271 47.6
vmacro15007 Vaccinium macrocarpon HOM05D002674 ORTHO05D007700 1.5e-41 174.1 263 49.0
Aa31LG1G9740 Aethionema arabicum HOM05D002674 ORTHO05D007700 4.3e-41 172.6 280 46.8
arahy.Tifrunner.gnm1.ann1.2P60TQ Arachis hypogaea HOM05D002674 ORTHO05D007700 4.3e-41 172.6 250 48.0
Carub.0001s0195 Capsella rubella HOM05D002674 ORTHO05D007700 5.7e-41 172.2 280 47.5
arahy.Tifrunner.gnm1.ann1.YN8C8B Arachis hypogaea HOM05D002674 ORTHO05D007700 1.3e-40 171.0 256 46.9
Oeu053149.1 Olea europaea HOM05D002674 ORTHO05D007700 2.4e-39 166.8 178 64.6
unitig_22.g5241 Utricularia gibba HOM05D002674 ORTHO05D007700 6.5e-37 158.7 230 51.3
ECA247G3124 Erigeron canadensis HOM05D002674 ORTHO05D007700 3.2e-36 156.4 293 42.3
BcaB05g23628 Brassica carinata HOM05D002674 ORTHO05D007700 1.6e-35 154.1 240 47.1
Aa31LG5G2060 Aethionema arabicum HOM05D002674 ORTHO05D007700 1.7e-32 144.1 254 44.5
SEGI_12569 Sequoiadendron giganteum HOM05D002674 ORTHO05D007700 1.1e-31 141.4 350 37.1
AUR62033139 Chenopodium quinoa HOM05D002674 ORTHO05D007700 2.4e-31 140.2 224 50.9
ATR0796G100 Amborella trichopoda HOM05D002674 ORTHO05D007700 5.9e-30 135.6 280 40.0
HPP92_006921 Vanilla planifolia HOM05D002674 ORTHO05D007700 2.9e-29 133.3 232 42.2
Hma1.2p1_0491F.1_g164510 Hydrangea macrophylla HOM05D002674 ORTHO05D007700 1.9e-28 130.6 113 69.0
AUR62008632 Chenopodium quinoa HOM05D002674 ORTHO05D007700 2.0e-25 120.6 183 53.6
Os01g0316500 Oryza sativa ssp. japonica HOM05D002674 ORTHO05D007700 9.7e-17 91.7 177 41.2
CANSAT56G3445 Cannabis sativa HOM05D002674 ORTHO05D007700 1.4e-15 87.8 106 49.1
Zm00001eb127170 Zea mays HOM05D002674 ORTHO05D007700 1.7e-13 80.9 242 33.5
Zm00001eb285590 Zea mays HOM05D002674 ORTHO05D007700 9.4e-12 75.1 294 32.0
BcaB07g32361 Brassica carinata HOM05D002674 ORTHO05D007700 2.4e-07 60.5 85 47.1
Zm00001eb018450 Zea mays HOM05D002674 ORTHO05D007700 9.1e-07 58.5 207 32.4
BolC6t36475H Brassica oleracea HOM05D000186 ORTHO05D015008 7.7e-06 55.5 94 39.4


User provided reference genes

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