Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002469g0040 Nicotiana tabacum HOM05D005667 ORTHO05D007299 2.9e-232 808.1 387 100.0
Nitab4.5_0005515g0060 Nicotiana tabacum HOM05D005667 ORTHO05D007299 1.9e-207 725.7 387 90.7
Sopen09g029820 Solanum pennellii HOM05D005667 ORTHO05D007299 7.1e-207 723.8 387 88.6
Solyc09g075000.3 Solanum lycopersicum HOM05D005667 ORTHO05D007299 1.2e-206 723.0 387 88.6
PGSC0003DMG400011397 Solanum tuberosum HOM05D005667 ORTHO05D007299 6.0e-206 720.7 387 89.1
Peaxi162Scf00001g00492 Petunia axillaris HOM05D005667 ORTHO05D007299 3.2e-183 645.2 374 82.1
Dinv33042 Davidia involucrata HOM05D005667 ORTHO05D007299 1.5e-164 583.2 386 72.8
MD11G1306000 Malus domestica HOM05D005667 ORTHO05D007299 6.3e-163 577.8 388 71.4
QL12p027280 Quercus lobata HOM05D005667 ORTHO05D007299 1.1e-162 577.0 394 69.8
Cfa005935 Carpinus fangiana HOM05D005667 ORTHO05D007299 1.0e-160 570.5 386 70.5
MD03G1286100 Malus domestica HOM05D005667 ORTHO05D007299 3.8e-160 568.5 388 69.8
Actinidia32226 Actinidia chinensis HOM05D005667 ORTHO05D007299 5.5e-159 564.7 387 69.8
Haze_04910 Corylus avellana HOM05D005667 ORTHO05D007299 4.7e-158 561.6 416 65.6
Hund18138 Selenicereus undatus HOM05D005667 ORTHO05D007299 2.3e-157 559.3 389 67.9
TAR365G0445 Trochodendron aralioides HOM05D005667 ORTHO05D007299 3.0e-157 558.9 386 69.4
CANSAT25G0856 Cannabis sativa HOM05D005667 ORTHO05D007299 6.7e-157 557.8 388 68.6
TAR627G0762 Trochodendron aralioides HOM05D005667 ORTHO05D007299 1.1e-156 557.0 386 68.9
vmacro14998 Vaccinium macrocarpon HOM05D005667 ORTHO05D007299 1.3e-155 553.5 391 69.8
Atru.chr5.1169 Acer truncatum HOM05D005667 ORTHO05D007299 1.7e-155 553.1 391 67.3
Lj1g0013419 Lotus japonicus HOM05D005667 ORTHO05D007299 4.8e-155 551.6 395 67.6
arahy.Tifrunner.gnm1.ann1.P0XQ2X Arachis hypogaea HOM05D005667 ORTHO05D007299 8.2e-155 550.8 395 66.3
FvH4_2g25530 Fragaria vesca HOM05D005667 ORTHO05D007299 3.1e-154 548.9 390 68.5
Nn4g25820 Nelumbo nucifera HOM05D005667 ORTHO05D007299 3.1e-154 548.9 386 68.1
QL12p026655 Quercus lobata HOM05D005667 ORTHO05D007299 4.1e-154 548.5 393 67.4
CiPaw.07G107100 Carya illinoinensis HOM05D005667 ORTHO05D007299 5.3e-154 548.1 386 67.9
VMungo1383G3519 Vigna mungo HOM05D005667 ORTHO05D007299 2.0e-153 546.2 391 66.0
SGA_v2.0_scaffold2G01401 Striga asiatica HOM05D005667 ORTHO05D007299 2.6e-153 545.8 392 67.6
arahy.Tifrunner.gnm1.ann1.AQSE8X Arachis hypogaea HOM05D005667 ORTHO05D007299 3.5e-153 545.4 395 65.6
Hma1.2p1_0209F.1_g088490 Hydrangea macrophylla HOM05D005667 ORTHO05D007299 4.5e-153 545.0 388 68.8
DCAR_005798 Daucus carota HOM05D005667 ORTHO05D007299 7.7e-153 544.3 386 68.1
Medtr7g108870 Medicago truncatula HOM05D005667 ORTHO05D007299 1.0e-152 543.9 384 67.2
Medtr8g058590 Medicago truncatula HOM05D005667 ORTHO05D007299 1.0e-152 543.9 384 67.2
Psat3g021960 Pisum sativum HOM05D005667 ORTHO05D007299 1.0e-152 543.9 400 65.8
MSTRG.21625 Avicennia marina HOM05D005667 ORTHO05D007299 1.7e-152 543.1 391 67.8
Glyma.19G210500 Glycine max HOM05D005667 ORTHO05D007299 1.7e-152 543.1 394 66.0
Glyma.03G213700 Glycine max HOM05D005667 ORTHO05D007299 5.0e-152 541.6 394 65.7
Phvul.001G206300 Phaseolus vulgaris HOM05D005667 ORTHO05D007299 5.0e-152 541.6 391 66.0
Migut.D00204 Erythranthe guttata HOM05D005667 ORTHO05D007299 7.2e-151 537.7 393 66.9
MELO3C017966.2 Cucumis melo HOM05D005667 ORTHO05D007299 4.7e-150 535.0 388 65.5
TWI23G0451 Tripterygium wilfordii HOM05D005667 ORTHO05D007299 1.8e-149 533.1 390 66.7
TPR.G9636 Trifolium pratense HOM05D005667 ORTHO05D007299 3.0e-149 532.3 396 65.2
Ciclev10020175m.g Citrus clementina HOM05D005667 ORTHO05D007299 6.7e-149 531.2 440 60.5
CsaV3_4G000700 Cucumis sativus L. HOM05D005667 ORTHO05D007299 8.8e-149 530.8 388 64.4
Ca_09151_v3 Cicer arietinum L. HOM05D005667 ORTHO05D007299 2.0e-148 529.6 398 63.6
COL.COLO4_23365 Corchorus olitorius HOM05D005667 ORTHO05D007299 2.6e-148 529.3 391 66.2
Thecc.01G298400 Theobroma cacao HOM05D005667 ORTHO05D007299 2.6e-148 529.3 391 65.2
Sc05g0004030 Simmondsia chinensis HOM05D005667 ORTHO05D007299 3.7e-147 525.4 391 64.7
Lalb_Chr18g0047071 Lupinus albus HOM05D005667 ORTHO05D007299 6.3e-147 524.6 398 64.1
FAN20G0834 Fragaria x ananassa HOM05D005667 ORTHO05D007299 1.4e-146 523.5 393 66.2
Lalb_Chr04g0259821 Lupinus albus HOM05D005667 ORTHO05D007299 2.4e-146 522.7 389 65.0
Sed0014922 Sechium edule HOM05D005667 ORTHO05D007299 2.4e-146 522.7 393 63.6
Ah.08g213150 Amaranthus hybridus HOM05D005667 ORTHO05D007299 3.1e-146 522.3 393 63.1
TWI59G1070 Tripterygium wilfordii HOM05D005667 ORTHO05D007299 2.0e-145 519.6 395 65.6
Duzib138G1280 Durio zibethinus HOM05D005667 ORTHO05D007299 2.9e-144 515.8 387 64.9
SalBow3G0511 Salvia bowleyana HOM05D005667 ORTHO05D007299 3.8e-144 515.4 368 67.4
HanXRQChr04g0118041 Helianthus annuus HOM05D005667 ORTHO05D007299 6.5e-144 514.6 390 64.4
AT2G47790 Arabidopsis thaliana HOM05D005667 ORTHO05D007299 1.1e-143 513.8 387 63.6
CSS0019258 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 1.5e-143 513.5 389 66.1
Cc01_g20730 Coffea canephora HOM05D005667 ORTHO05D007299 1.5e-143 513.5 440 58.0
Prupe.8G259400 Prunus persica HOM05D005667 ORTHO05D007299 3.6e-142 508.8 341 71.6
Lsat_1_v5_gn_8_53441 Lactuca sativa HOM05D005667 ORTHO05D007299 6.1e-142 508.1 402 63.9
GSVIVG01027987001 Vitis vinifera HOM05D005667 ORTHO05D007299 6.1e-142 508.1 341 69.8
THA.LOC104817511 Tarenaya hassleriana HOM05D005667 ORTHO05D007299 5.2e-141 505.0 395 62.3
AL4G47370 Arabidopsis lyrata HOM05D005667 ORTHO05D007299 1.2e-140 503.8 391 61.9
Sp4g29720 Schrenkiella parvula HOM05D005667 ORTHO05D007299 2.6e-140 502.7 394 61.9
Aqoxy2G02973 Aquilegia oxysepala HOM05D005667 ORTHO05D007299 9.8e-140 500.7 399 64.2
Lj1C26T7 Lonicera japonica HOM05D005667 ORTHO05D007299 2.8e-139 499.2 314 72.9
Eucgr.K03468 Eucalyptus grandis HOM05D005667 ORTHO05D007299 4.8e-139 498.4 372 64.8
AUR62008656 Chenopodium quinoa HOM05D005667 ORTHO05D007299 1.1e-138 497.3 388 60.8
AUR62033112 Chenopodium quinoa HOM05D005667 ORTHO05D007299 9.1e-138 494.2 386 61.1
Carub.0004s3050 Capsella rubella HOM05D005667 ORTHO05D007299 1.7e-136 490.0 389 61.4
Manes.01G217700 Manihot esculenta HOM05D005667 ORTHO05D007299 1.7e-136 490.0 391 63.2
CDE08G0318 Ceratophyllum demersum HOM05D005667 ORTHO05D007299 7.2e-135 484.6 383 60.6
Thhalv10001494m.g Eutrema salsugineum HOM05D005667 ORTHO05D007299 1.6e-134 483.4 389 61.4
Potri.002G205600 Populus trichocarpa HOM05D005667 ORTHO05D007299 3.6e-134 482.3 384 62.0
PSO210G4429 Papaver somniferum HOM05D005667 ORTHO05D007299 4.7e-134 481.9 393 62.3
Potri.014G130600 Populus trichocarpa HOM05D005667 ORTHO05D007299 3.0e-133 479.2 391 61.9
EL10Ac7g17451 Beta vulgaris HOM05D005667 ORTHO05D007299 6.8e-133 478.0 387 60.5
Aa31LG1G29130 Aethionema arabicum HOM05D005667 ORTHO05D007299 2.0e-132 476.5 397 59.2
ATR0796G332 Amborella trichopoda HOM05D005667 ORTHO05D007299 2.6e-132 476.1 388 60.3
Sabra02G0153700 Salix brachista HOM05D005667 ORTHO05D007299 2.6e-132 476.1 411 58.4
ClCG10G010830 Citrullus lanatus HOM05D005667 ORTHO05D007299 7.5e-132 474.6 388 60.6
CARHR143160 Cardamine hirsuta HOM05D005667 ORTHO05D007299 1.7e-131 473.4 394 59.4
unitig_0.g1174 Utricularia gibba HOM05D005667 ORTHO05D007299 6.3e-131 471.5 423 57.4
Gohir.D12G135100 Gossypium hirsutum HOM05D005667 ORTHO05D007299 1.2e-129 467.2 390 60.0
PSO170G6061 Papaver somniferum HOM05D005667 ORTHO05D007299 5.9e-129 464.9 373 62.7
Rhsim01G0284200 Rhododendron simsii HOM05D005667 ORTHO05D007299 6.6e-128 461.5 393 61.3
PGR044G1684 Punica granatum HOM05D005667 ORTHO05D007299 8.6e-128 461.1 393 57.8
HPP92_027132 Vanilla planifolia HOM05D005667 ORTHO05D007299 1.5e-127 460.3 375 60.3
Gorai.008G146100 Gossypium raimondii HOM05D005667 ORTHO05D007299 1.9e-127 459.9 388 59.8
BcaB06g29498 Brassica carinata HOM05D005667 ORTHO05D007299 4.3e-127 458.8 409 56.2
Gohir.A12G131200 Gossypium hirsutum HOM05D005667 ORTHO05D007299 9.5e-127 457.6 390 58.7
Sabra14G0097200 Salix brachista HOM05D005667 ORTHO05D007299 2.8e-126 456.1 391 58.8
Hma1.2p1_0209F.1_g088500 Hydrangea macrophylla HOM05D005667 ORTHO05D007299 2.0e-124 449.9 427 55.7
BolC4t28779H Brassica oleracea HOM05D005667 ORTHO05D007299 7.5e-124 448.0 389 57.6
C04p72980 Brassica napus HOM05D005667 ORTHO05D007299 9.8e-124 447.6 389 57.1
CSS0024566 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 9.8e-124 447.6 388 57.7
A04p35070 Brassica napus HOM05D005667 ORTHO05D007299 1.7e-123 446.8 376 58.8
CSS0050073 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 4.9e-123 445.3 387 58.7
BraA04t18943Z Brassica rapa HOM05D005667 ORTHO05D007299 1.4e-122 443.7 377 58.4
SHI15190 Sapria himalayana HOM05D005667 ORTHO05D007299 7.0e-122 441.4 376 60.4
BcaC02g06992 Brassica carinata HOM05D005667 ORTHO05D007299 1.7e-120 436.8 388 55.9
Actinidia24829 Actinidia chinensis HOM05D005667 ORTHO05D007299 1.1e-119 434.1 387 57.6
SEGI_23788 Sequoiadendron giganteum HOM05D005667 ORTHO05D007299 2.4e-114 416.4 399 53.1
ECA236G1571 Erigeron canadensis HOM05D005667 ORTHO05D007299 7.8e-113 411.4 343 60.9
Sc05g0001380 Simmondsia chinensis HOM05D005667 ORTHO05D007299 2.5e-111 406.4 300 64.0
Dinv19706 Davidia involucrata HOM05D005667 ORTHO05D007299 2.6e-108 396.4 267 71.2
Cpa.g.sc9.222 Carica papaya HOM05D005667 ORTHO05D007299 1.1e-98 364.4 276 63.4
Medtr8g058557 Medicago truncatula HOM05D005667 ORTHO05D007299 1.0e-96 357.8 236 71.6
SMO329G0065 Selaginella moellendorffii HOM05D005667 ORTHO05D007299 9.6e-87 324.7 346 49.1
Pp3c2_26100 Physcomitrium patens HOM05D005667 ORTHO05D007299 1.3e-86 324.3 376 45.5
Mapoly0153s0027 Marchantia polymorpha HOM05D005667 ORTHO05D007299 6.2e-86 322.0 379 43.5
Pp3c11_14960 Physcomitrium patens HOM05D005667 ORTHO05D007299 1.1e-85 321.2 377 44.8
BcaB06g29495 Brassica carinata HOM05D005667 ORTHO05D007299 1.3e-80 304.3 276 54.0
HPP92_021590 Vanilla planifolia HOM05D005667 ORTHO05D007299 1.1e-77 294.7 227 62.1
Pp3c11_15090 Physcomitrium patens HOM05D005667 ORTHO05D007299 3.0e-72 276.6 299 46.5
RcHm_v2.0_Chr6g0293741 Rosa chinensis HOM05D005667 ORTHO05D007299 5.1e-72 275.8 200 67.0
Nn3g21456 Nelumbo nucifera HOM05D005667 ORTHO05D007299 1.4e-69 267.7 319 48.6
Oeu011452.2 Olea europaea HOM05D005667 ORTHO05D007299 1.1e-66 258.1 174 71.3
Zm00001eb157470 Zea mays HOM05D005667 ORTHO05D007299 2.5e-66 256.9 203 58.1
AagrBONN_evm.TU.Sc2ySwM_344.2785 Anthoceros agrestis HOM05D005667 ORTHO05D007299 1.5e-60 237.7 233 51.1
Os12g0294100 Oryza sativa ssp. japonica HOM05D005667 ORTHO05D007299 2.6e-52 210.3 190 55.3
Actinidia21054 Actinidia chinensis HOM05D005667 ORTHO05D007299 7.9e-49 198.7 152 63.2
Cre03.g178050 Chlamydomonas reinhardtii HOM05D005667 ORTHO05D007299 3.9e-48 196.4 358 35.8
MCO09G319 Micromonas commoda HOM05D005667 ORTHO05D007299 1.4e-42 177.9 378 33.6
RcHm_v2.0_Chr6g0293751 Rosa chinensis HOM05D005667 ORTHO05D007299 4.2e-42 176.4 138 64.5
BcaC02g06993 Brassica carinata HOM05D005667 ORTHO05D007299 1.2e-36 158.3 124 62.9
PRCOL_00003266 Prasinoderma coloniale HOM05D005667 ORTHO05D007299 4.5e-36 156.4 365 31.0
Migut.D00125 Erythranthe guttata HOM05D005667 ORTHO05D007299 1.1e-29 135.2 178 40.4
CBR_g34279 Chara braunii HOM05D005667 ORTHO05D007299 1.8e-29 134.4 160 42.5
Migut.G00109 Erythranthe guttata HOM05D005667 ORTHO05D007299 6.8e-24 115.9 171 39.8
CBR_g31107 Chara braunii HOM05D000019 ORTHO05D000048 7.0e-13 79.3 159 32.1
CBR_g31109 Chara braunii HOM05D000019 ORTHO05D000048 1.5e-10 71.6 69 44.9
Actinidia13473 Actinidia chinensis HOM05D005667 ORTHO05D000474 3.6e-09 67.0 70 50.0
Prupe.8G259600 Prunus persica HOM05D005667 ORTHO05D007299 1.3e-06 58.5 44 68.2
CSS0009653 Camellia sinensis var. sinensis HOM05D004669 ORTHO05D005767 4.9e-06 56.6 220 25.9


User provided reference genes

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