Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002468g0060 Nicotiana tabacum HOM05D012441 ORTHO05D013726 0.0e+00 3567.3 3480 100.0
Nitab4.5_0007124g0010 Nicotiana tabacum HOM05D012441 ORTHO05D013726 0.0e+00 1899.8 3721 71.0
Sopen02g031170 Solanum pennellii HOM05D012441 ORTHO05D013726 4.4e-207 727.6 784 60.8
Peaxi162Scf00129g01541 Petunia axillaris HOM05D012441 ORTHO05D013726 2.0e-175 622.5 3518 52.8
Solyc02g086458.1 Solanum lycopersicum HOM05D012441 ORTHO05D013726 1.1e-157 563.5 620 60.0
PGSC0003DMG400012631 Solanum tuberosum HOM05D012441 ORTHO05D013726 1.4e-115 423.7 409 64.3
CAN.G473.9 Capsicum annuum HOM05D012441 ORTHO05D013726 1.6e-100 373.6 781 39.7
Solyc02g086452.1 Solanum lycopersicum HOM05D012441 ORTHO05D013726 2.0e-50 207.2 1010 41.8
Dinv35105 Davidia involucrata HOM05D008944 ORTHO05D012715 1.3e-20 108.2 421 32.1
TAR622G0869 Trochodendron aralioides HOM05D008944 ORTHO05D012260 1.7e-20 107.8 309 36.9
Rhsim08G0050800 Rhododendron simsii HOM05D008944 ORTHO05D012715 6.3e-20 105.9 294 35.0
Hma1.2p1_0999F.1_g246230 Hydrangea macrophylla HOM05D008944 ORTHO05D012260 2.2e-17 97.4 188 39.9
Oeu054621.3 Olea europaea HOM05D039831 ORTHO05D036970 1.1e-16 95.1 409 30.6
QL02p074766 Quercus lobata HOM05D018456 ORTHO05D024862 1.2e-15 91.7 424 29.2
CSS0002578 Camellia sinensis var. sinensis HOM05D008944 ORTHO05D012715 6.1e-15 89.4 437 30.2
Haze_14737 Corylus avellana HOM05D018456 ORTHO05D024862 3.0e-14 87.0 427 29.5
GSVIVG01032411001 Vitis vinifera HOM05D000662 ORTHO05D012715 3.0e-14 87.0 282 32.3
Dinv33443 Davidia involucrata HOM05D008944 ORTHO05D012715 8.8e-14 85.5 428 31.5
TAR374G0422 Trochodendron aralioides HOM05D003163 ORTHO05D003504 3.3e-13 83.6 424 30.9
Lju41A41T31 Lonicera japonica HOM05D008944 ORTHO05D012260 1.7e-12 81.3 430 29.1
Cfa007371 Carpinus fangiana HOM05D018456 ORTHO05D024862 2.2e-12 80.9 498 26.1
Duzib264G0142 Durio zibethinus HOM05D010821 ORTHO05D012260 6.3e-12 79.3 273 32.2
Solyc02g086456.1 Solanum lycopersicum HOM05D012441 ORTHO05D013726 5.3e-11 76.3 59 55.9
CiPaw.03G043400 Carya illinoinensis HOM05D018456 ORTHO05D024862 7.0e-11 75.9 490 27.3
Solyc02g086454.1 Solanum lycopersicum HOM05D012441 ORTHO05D013726 1.2e-10 75.1 202 63.4
MSTRG.24036 Avicennia marina HOM05D025081 ORTHO05D019527 2.7e-10 73.9 406 31.5
Cc07_g01740 Coffea canephora HOM05D008944 ORTHO05D012260 3.5e-10 73.6 440 27.3
Thecc.04G017000 Theobroma cacao HOM05D010821 ORTHO05D012260 1.0e-09 72.0 493 25.2
Ciclev10014006m.g Citrus clementina HOM05D018456 ORTHO05D012260 1.7e-09 71.2 446 26.7
ECA232G4849 Erigeron canadensis HOM05D018074 ORTHO05D020589 2.2e-09 70.9 462 29.0
Atru.chr6.2390 Acer truncatum HOM05D008944 ORTHO05D012260 5.0e-09 69.7 350 28.6
PSO782G2207 Papaver somniferum HOM05D034920 ORTHO05D037276 1.1e-08 68.6 420 25.2
Migut.H00079 Erythranthe guttata HOM05D025081 ORTHO05D019527 1.5e-08 68.2 399 28.6
Cpa.g.sc108.66 Carica papaya HOM05D008944 ORTHO05D012260 1.9e-08 67.8 246 28.5
Gorai.012G064000 Gossypium raimondii HOM05D010821 ORTHO05D012260 4.2e-08 66.6 412 28.2
MBI10_g00741_MAGBIO Magnolia biondii HOM05D012441 ORTHO05D013726 4.2e-08 66.6 380 28.2
Duzib187G0380 Durio zibethinus HOM05D010821 ORTHO05D012260 5.5e-08 66.2 424 26.9
Gohir.D04G057300 Gossypium hirsutum HOM05D010821 ORTHO05D012260 5.5e-08 66.2 412 28.2
THA.LOC104805961 Tarenaya hassleriana HOM05D011342 ORTHO05D013726 5.5e-08 66.2 454 28.9
Lsat_1_v5_gn_4_183881 Lactuca sativa HOM05D018074 ORTHO05D020589 7.2e-08 65.9 296 28.4
COL.COLO4_29109 Corchorus olitorius HOM05D010821 ORTHO05D012260 3.6e-07 63.5 325 32.0
Gohir.A05G355900 Gossypium hirsutum HOM05D010821 ORTHO05D012260 6.1e-07 62.8 420 27.9
EL10Ac6g13401 Beta vulgaris HOM05D036575 ORTHO05D031691 1.8e-06 61.2 128 33.6
HanXRQChr09g0255141 Helianthus annuus HOM05D018074 ORTHO05D020589 2.3e-06 60.8 351 30.2
PGR142G1054 Punica granatum HOM05D012441 ORTHO05D013726 8.8e-06 58.9 179 33.5
RcHm_v2.0_Chr2g0172861 Rosa chinensis HOM05D011862 ORTHO05D014222 8.8e-06 58.9 445 26.7


User provided reference genes

Program Settings