Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002467g0110 Nicotiana tabacum HOM05D005253 ORTHO05D006058 1.2e-165 586.6 340 100.0
Nitab4.5_0005994g0050 Nicotiana tabacum HOM05D005253 ORTHO05D006058 1.3e-148 530.0 340 92.1
Solyc03g114760.3 Solanum lycopersicum HOM05D005253 ORTHO05D006058 1.3e-140 503.4 340 87.4
PGSC0003DMG400024524 Solanum tuberosum HOM05D005253 ORTHO05D006058 2.5e-139 499.2 340 87.1
Sopen03g033840 Solanum pennellii HOM05D005253 ORTHO05D006058 2.1e-138 496.1 340 87.4
Peaxi162Scf00017g03254 Petunia axillaris HOM05D005253 ORTHO05D006058 5.2e-137 491.5 347 85.3
CAN.G982.39 Capsicum annuum HOM05D005253 ORTHO05D006058 2.7e-117 426.0 439 62.9
Nitab4.5_0002041g0040 Nicotiana tabacum HOM05D005253 ORTHO05D006058 7.6e-104 381.3 339 70.5
Peaxi162Scf00365g00114 Petunia axillaris HOM05D005253 ORTHO05D006058 7.6e-88 328.2 352 60.5
Dinv38642 Davidia involucrata HOM05D005253 ORTHO05D006058 4.2e-86 322.4 353 62.0
MSTRG.9581 Avicennia marina HOM05D005253 ORTHO05D006058 5.5e-86 322.0 344 63.7
GSVIVG01008154001 Vitis vinifera HOM05D005253 ORTHO05D006058 6.0e-85 318.5 348 62.1
Rhsim08G0142100 Rhododendron simsii HOM05D005253 ORTHO05D006058 2.3e-84 316.6 344 57.0
Dinv17459 Davidia involucrata HOM05D005253 ORTHO05D006058 3.3e-83 312.8 322 63.4
TWI60G1362 Tripterygium wilfordii HOM05D005253 ORTHO05D006058 4.5e-80 302.4 342 58.8
Cfa017731 Carpinus fangiana HOM05D005253 ORTHO05D006058 5.0e-79 298.9 349 58.7
Haze_18511 Corylus avellana HOM05D005253 ORTHO05D006058 4.2e-78 295.8 350 58.0
Oeu014427.1 Olea europaea HOM05D005253 ORTHO05D006058 5.5e-78 295.4 340 61.5
Duzib068G0534 Durio zibethinus HOM05D005253 ORTHO05D006058 7.9e-77 291.6 342 57.9
vmacro17641 Vaccinium macrocarpon HOM05D005253 ORTHO05D006058 7.9e-77 291.6 365 51.2
Gohir.A09G243900 Gossypium hirsutum HOM05D005253 ORTHO05D006058 1.8e-76 290.4 341 53.1
CSS0036905 Camellia sinensis var. sinensis HOM05D005253 ORTHO05D006058 6.7e-76 288.5 347 58.8
Gorai.006G268700 Gossypium raimondii HOM05D005253 ORTHO05D006058 9.7e-75 284.6 341 56.0
Gohir.D07G063700 Gossypium hirsutum HOM05D005253 ORTHO05D006058 4.8e-74 282.3 347 53.3
Nitab4.5_0001797g0020 Nicotiana tabacum HOM05D005253 ORTHO05D006058 8.2e-74 281.6 251 70.1
SGA_v2.0_scaffold65G22104 Striga asiatica HOM05D005253 ORTHO05D006058 1.4e-73 280.8 339 54.9
Ciclev10020920m.g Citrus clementina HOM05D005253 ORTHO05D006058 4.1e-73 279.3 348 56.3
Duzib205G1609 Durio zibethinus HOM05D005253 ORTHO05D006058 7.7e-72 275.0 343 50.7
Migut.D01615 Erythranthe guttata HOM05D005253 ORTHO05D006058 2.9e-71 273.1 346 58.7
Potri.004G107000 Populus trichocarpa HOM05D005253 ORTHO05D006058 1.4e-70 270.8 348 52.3
Lsat_1_v5_gn_5_23380 Lactuca sativa HOM05D005253 ORTHO05D006058 3.2e-70 269.6 353 56.9
TWI81G0215 Tripterygium wilfordii HOM05D005253 ORTHO05D006058 3.2e-70 269.6 343 54.8
Gohir.D09G244600 Gossypium hirsutum HOM05D005253 ORTHO05D006058 7.2e-70 268.5 341 50.7
Prupe.5G210000 Prunus persica HOM05D005253 ORTHO05D006058 1.6e-69 267.3 345 56.5
SalBow7G2030 Salvia bowleyana HOM05D005253 ORTHO05D006058 7.9e-69 265.0 349 51.9
MBI14_g08108_MAGBIO Magnolia biondii HOM05D005253 ORTHO05D006058 1.8e-68 263.8 344 52.6
Cc04_g08280 Coffea canephora HOM05D005253 ORTHO05D006058 6.7e-68 261.9 349 51.0
arahy.Tifrunner.gnm1.ann1.TSF3K2 Arachis hypogaea HOM05D005253 ORTHO05D006058 8.8e-68 261.5 347 52.4
Gorai.001G067300 Gossypium raimondii HOM05D005253 ORTHO05D006058 4.3e-67 259.2 347 49.9
TAR371G0033 Trochodendron aralioides HOM05D005253 ORTHO05D006058 4.3e-67 259.2 348 53.2
Glyma.05G018200 Glycine max HOM05D005253 ORTHO05D006058 1.3e-66 257.7 336 52.1
FAN08G1625 Fragaria x ananassa HOM05D005253 ORTHO05D006058 1.8e-65 253.8 336 58.3
Glyma.17G081700 Glycine max HOM05D005253 ORTHO05D006058 2.4e-65 253.4 336 52.1
Gohir.A07G058832 Gossypium hirsutum HOM05D005253 ORTHO05D006058 2.4e-65 253.4 347 50.4
PSO478G2666 Papaver somniferum HOM05D005253 ORTHO05D006058 4.1e-65 252.7 339 52.5
arahy.Tifrunner.gnm1.ann1.399KXC Arachis hypogaea HOM05D005253 ORTHO05D006058 6.9e-65 251.9 347 51.6
Hma1.2p1_0060F.1_g032740 Hydrangea macrophylla HOM05D005253 ORTHO05D006058 1.2e-64 251.1 377 46.4
CANSAT80G0823 Cannabis sativa HOM05D005253 ORTHO05D006058 2.0e-64 250.4 341 50.7
PSO017G7367 Papaver somniferum HOM05D005253 ORTHO05D006058 2.0e-64 250.4 339 47.5
FvH4_5g13401 Fragaria vesca HOM05D005253 ORTHO05D006058 7.7e-64 248.4 336 57.1
Lj4g0025893 Lotus japonicus HOM05D005253 ORTHO05D006058 1.7e-63 247.3 302 51.7
unitig_578.g15937 Utricularia gibba HOM05D005253 ORTHO05D006058 2.2e-63 246.9 344 52.6
MD06G1205700 Malus domestica HOM05D005253 ORTHO05D006058 2.9e-63 246.5 343 53.1
MD14G1216600 Malus domestica HOM05D005253 ORTHO05D006058 2.9e-63 246.5 343 53.6
Sed0023471 Sechium edule HOM05D005253 ORTHO05D006058 5.0e-63 245.7 356 52.0
FAN18G4071 Fragaria x ananassa HOM05D005253 ORTHO05D006058 6.5e-63 245.4 352 54.8
FAN13G1214 Fragaria x ananassa HOM05D005253 ORTHO05D006058 1.4e-62 244.2 336 56.2
ECA246G0831 Erigeron canadensis HOM05D005253 ORTHO05D006058 2.5e-62 243.4 335 52.2
RcHm_v2.0_Chr7g0183731 Rosa chinensis HOM05D005253 ORTHO05D006058 2.5e-62 243.4 337 56.4
COL.COLO4_27496 Corchorus olitorius HOM05D005253 ORTHO05D006058 4.2e-62 242.7 345 47.8
Cpa.g.sc3.232 Carica papaya HOM05D005253 ORTHO05D006058 7.2e-62 241.9 352 51.7
THA.LOC104818357 Tarenaya hassleriana HOM05D005253 ORTHO05D006058 1.2e-61 241.1 339 51.6
TPR.G1989 Trifolium pratense HOM05D005253 ORTHO05D006058 1.2e-61 241.1 335 45.7
QL10p020742 Quercus lobata HOM05D005253 ORTHO05D006058 1.6e-61 240.7 514 42.4
DCAR_010175 Daucus carota HOM05D005253 ORTHO05D006058 1.8e-60 237.3 354 48.3
Medtr4g109960 Medicago truncatula HOM05D005253 ORTHO05D006058 3.0e-60 236.5 303 47.9
Lalb_Chr13g0302681 Lupinus albus HOM05D005253 ORTHO05D006058 5.1e-60 235.7 303 53.8
Manes.14G089100 Manihot esculenta HOM05D005253 ORTHO05D006058 1.1e-59 234.6 354 50.3
Phvul.003G182200 Phaseolus vulgaris HOM05D005253 ORTHO05D006058 2.6e-59 233.4 342 50.0
Nn3g17535 Nelumbo nucifera HOM05D005253 ORTHO05D006058 2.8e-58 229.9 346 49.4
TPR.G2086 Trifolium pratense HOM05D005253 ORTHO05D006058 2.8e-58 229.9 304 46.7
VMungo1215G3162 Vigna mungo HOM05D005253 ORTHO05D006058 1.8e-57 227.3 338 50.9
HanXRQChr05g0157441 Helianthus annuus HOM05D005253 ORTHO05D006058 1.5e-56 224.2 338 49.4
SHI17413 Sapria himalayana HOM05D005253 ORTHO05D006058 1.3e-55 221.1 315 47.9
unitig_8.g4498 Utricularia gibba HOM05D005253 ORTHO05D006058 1.7e-55 220.7 344 50.6
Lj9C438G4 Lonicera japonica HOM05D005253 ORTHO05D006058 2.2e-55 220.3 332 51.8
AUR62039667 Chenopodium quinoa HOM05D005253 ORTHO05D006058 3.2e-54 216.5 319 50.8
Manes.06G080800 Manihot esculenta HOM05D005253 ORTHO05D006058 9.4e-54 214.9 350 49.4
Hund09956 Selenicereus undatus HOM05D005253 ORTHO05D006058 1.2e-53 214.5 335 48.4
EL10Ac5g11189 Beta vulgaris HOM05D005253 ORTHO05D006058 4.7e-53 212.6 322 49.1
Thhalv10014100m.g Eutrema salsugineum HOM05D005253 ORTHO05D006058 4.7e-53 212.6 339 42.2
AL6G18490 Arabidopsis lyrata HOM05D005253 ORTHO05D006058 8.0e-53 211.8 338 43.5
AT5G08120 Arabidopsis thaliana HOM05D005253 ORTHO05D006058 1.8e-52 210.7 336 43.2
PGR044G0085 Punica granatum HOM05D005253 ORTHO05D006058 8.8e-52 208.4 341 46.9
Ah.02g114240 Amaranthus hybridus HOM05D005253 ORTHO05D006058 2.6e-51 206.8 325 48.0
Atru.chr4.1592 Acer truncatum HOM05D005253 ORTHO05D006058 3.7e-50 203.0 346 47.1
Eucgr.K02550 Eucalyptus grandis HOM05D005253 ORTHO05D006058 8.2e-50 201.8 260 56.5
PSO063G5368 Papaver somniferum HOM05D005253 ORTHO05D006058 3.1e-49 199.9 348 45.7
ClCG04G011560 Citrullus lanatus HOM05D005253 ORTHO05D006058 4.1e-49 199.5 379 40.6
Hund02544 Selenicereus undatus HOM05D005253 ORTHO05D006058 9.1e-49 198.4 310 48.4
ATR0691G224 Amborella trichopoda HOM05D005253 ORTHO05D006058 1.2e-48 198.0 315 43.5
PSO782G3834 Papaver somniferum HOM05D005253 ORTHO05D006058 2.6e-48 196.8 348 41.7
CARHR205070 Cardamine hirsuta HOM05D005253 ORTHO05D006058 3.5e-48 196.4 342 41.5
Sc04g0003900 Simmondsia chinensis HOM05D005253 ORTHO05D006058 2.2e-47 193.7 300 44.3
CDE05G1733 Ceratophyllum demersum HOM05D005253 ORTHO05D006058 6.5e-47 192.2 307 44.0
HanXRQChr02g0051141 Helianthus annuus HOM05D005253 ORTHO05D006058 3.2e-46 189.9 320 48.4
C09p68830 Brassica napus HOM05D005253 ORTHO05D006058 4.2e-46 189.5 345 39.4
BcaB08g37285 Brassica carinata HOM05D005253 ORTHO05D006058 1.2e-45 188.0 345 39.1
Aqoxy3G03749 Aquilegia oxysepala HOM05D005253 ORTHO05D006058 2.7e-45 186.8 346 39.0
BraA10t44904Z Brassica rapa HOM05D005253 ORTHO05D006058 4.7e-45 186.0 346 38.7
AUR62032138 Chenopodium quinoa HOM05D005253 ORTHO05D006058 3.0e-44 183.3 267 53.6
MELO3C002054.2 Cucumis melo HOM05D005253 ORTHO05D006058 3.0e-44 183.3 384 39.3
CiPaw.16G080100 Carya illinoinensis HOM05D005253 ORTHO05D006058 3.4e-43 179.9 257 52.9
Lj1g0009577 Lotus japonicus HOM05D005253 ORTHO05D006058 7.5e-43 178.7 305 46.2
Carub.0006s0700 Capsella rubella HOM05D005253 ORTHO05D006058 5.4e-41 172.6 339 44.5
Thecc.03G108400 Theobroma cacao HOM05D005253 ORTHO05D006058 9.1e-41 171.8 237 53.6
Peaxi162Scf00091g00143 Petunia axillaris HOM05D005253 ORTHO05D006058 1.3e-39 167.9 240 47.1
Aqoxy3G00549 Aquilegia oxysepala HOM05D005253 ORTHO05D006058 1.7e-39 167.5 344 37.2
CDE02G3817 Ceratophyllum demersum HOM05D005253 ORTHO05D006058 1.1e-38 164.9 306 38.9
Glyma.04G159100 Glycine max HOM05D005253 ORTHO05D006058 1.1e-38 164.9 314 35.4
Ca_21755_v3 Cicer arietinum L. HOM05D005253 ORTHO05D006058 4.2e-38 162.9 336 36.6
BolC9t59630H Brassica oleracea HOM05D005253 ORTHO05D006058 5.5e-38 162.5 346 36.7
Ah.11g047400 Amaranthus hybridus HOM05D005253 ORTHO05D006058 9.4e-38 161.8 313 39.6
A10p28550 Brassica napus HOM05D005253 ORTHO05D006058 3.6e-37 159.8 346 35.8
Prupe.8G074000 Prunus persica HOM05D005253 ORTHO05D006058 1.0e-36 158.3 248 43.5
Sabra04G0074900 Salix brachista HOM05D005253 ORTHO05D006058 5.2e-36 156.0 283 40.6
CsaV3_1G006260 Cucumis sativus L. HOM05D005253 ORTHO05D006058 8.8e-36 155.2 380 36.1
Sp6g34840 Schrenkiella parvula HOM05D005253 ORTHO05D006058 2.0e-35 154.1 339 34.5
Zm00001eb380690 Zea mays HOM05D005253 ORTHO05D006058 1.3e-34 151.4 290 37.9
Zm00001eb280850 Zea mays HOM05D005253 ORTHO05D006058 2.2e-34 150.6 293 38.2
Aa31LG3G18420 Aethionema arabicum HOM05D005253 ORTHO05D006058 2.8e-34 150.2 341 35.2
HPP92_019902 Vanilla planifolia HOM05D005253 ORTHO05D006058 8.3e-34 148.7 300 36.3
Actinidia04794 Actinidia chinensis HOM05D005253 ORTHO05D006058 1.3e-31 141.4 123 69.9
HPP92_015550 Vanilla planifolia HOM05D005253 ORTHO05D006058 5.0e-31 139.4 300 32.7
Actinidia10441 Actinidia chinensis HOM05D005253 ORTHO05D006058 9.2e-25 118.6 132 59.8
Psat4g046080 Pisum sativum HOM05D005253 ORTHO05D006058 1.1e-22 111.7 304 30.9
Oeu014549.1 Olea europaea HOM05D005253 ORTHO05D006058 1.4e-20 104.8 113 59.3
BcaB08g37286 Brassica carinata HOM05D005460 ORTHO05D006058 3.1e-20 103.6 191 37.7
SEGI_36320 Sequoiadendron giganteum HOM05D005253 ORTHO05D006058 3.1e-20 103.6 363 32.2
Os09g0476000 Oryza sativa ssp. japonica HOM05D005253 ORTHO05D006058 1.5e-19 101.3 268 33.6
arahy.Tifrunner.gnm1.ann1.U6KDHT Arachis hypogaea HOM05D005253 ORTHO05D006058 2.0e-19 100.9 321 33.0
Os06g0284800 Oryza sativa ssp. japonica HOM05D005253 ORTHO05D006058 2.6e-19 100.5 294 29.6
arahy.Tifrunner.gnm1.ann1.4B3W67 Arachis hypogaea HOM05D005253 ORTHO05D006058 2.9e-18 97.1 321 30.8
Actinidia04795 Actinidia chinensis HOM05D005253 ORTHO05D006058 4.1e-17 93.2 107 53.3
Nn4g23537 Nelumbo nucifera HOM05D005253 ORTHO05D006058 7.0e-17 92.4 103 53.4
Zm00001eb315970 Zea mays HOM05D005253 ORTHO05D006058 9.2e-17 92.0 261 36.8
TAR629G1609 Trochodendron aralioides HOM05D004464 ORTHO05D005135 6.0e-16 89.4 260 38.5
TPR.G28909 Trifolium pratense HOM05D005253 ORTHO05D006058 4.3e-14 83.2 95 52.6
Nn4g23536 Nelumbo nucifera HOM05D005253 ORTHO05D006058 1.5e-11 74.7 87 47.1
Oeu051243.1 Olea europaea HOM05D005253 ORTHO05D006058 5.8e-11 72.8 87 47.1
Duzib132G0740 Durio zibethinus HOM05D005253 ORTHO05D006058 9.8e-11 72.0 74 56.8
Gohir.D13G101706 Gossypium hirsutum HOM05D005253 ORTHO05D006058 1.3e-10 71.6 90 52.2
BraA02t04942Z Brassica rapa HOM05D009919 ORTHO05D012044 3.0e-07 60.5 117 36.8


User provided reference genes

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