Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002463g0080 Nicotiana tabacum HOM05D002211 ORTHO05D002206 1.3e-66 256.1 120 100.0
Nitab4.5_0002463g0070 Nicotiana tabacum HOM05D002211 ORTHO05D002206 2.3e-55 218.8 135 80.7
Nitab4.5_0011983g0010 Nicotiana tabacum HOM05D002211 ORTHO05D002206 5.9e-51 204.1 134 74.6
PGSC0003DMG400020177 Solanum tuberosum HOM05D002211 ORTHO05D002206 9.1e-36 153.7 140 57.9
Peaxi162Scf01242g00126 Petunia axillaris HOM05D002211 ORTHO05D002206 3.5e-35 151.8 140 59.3
Solyc06g083080.3 Solanum lycopersicum HOM05D002211 ORTHO05D002206 1.3e-34 149.8 137 54.7
Sopen06g034470 Solanum pennellii HOM05D002211 ORTHO05D002206 1.3e-34 149.8 137 54.7
Nitab4.5_0000038g0090 Nicotiana tabacum HOM05D002211 ORTHO05D002206 4.7e-32 141.4 140 56.4
Nitab4.5_0005972g0020 Nicotiana tabacum HOM05D002211 ORTHO05D002206 3.3e-30 135.2 135 57.0
Peaxi162Scf00335g00107 Petunia axillaris HOM05D002211 ORTHO05D002206 3.7e-29 131.7 139 54.7
Nitab4.5_0009151g0010 Nicotiana tabacum HOM05D002211 ORTHO05D002206 6.3e-29 131.0 137 54.7
Nitab4.5_0005972g0010 Nicotiana tabacum HOM05D002211 ORTHO05D002206 1.1e-28 130.2 139 52.5
Nitab4.5_0000038g0110 Nicotiana tabacum HOM05D002211 ORTHO05D002206 7.0e-28 127.5 151 51.7
PGSC0003DMG400006602 Solanum tuberosum HOM05D002211 ORTHO05D002206 5.9e-27 124.4 147 50.3
Peaxi162Scf00335g00116 Petunia axillaris HOM05D002211 ORTHO05D002206 2.9e-26 122.1 141 50.4
DCAR_018626 Daucus carota HOM05D002211 ORTHO05D002206 1.9e-25 119.4 138 51.4
CSS0000478 Camellia sinensis var. sinensis HOM05D002211 ORTHO05D002206 5.5e-25 117.9 134 52.2
Dinv28814 Davidia involucrata HOM05D002211 ORTHO05D002206 5.5e-25 117.9 136 51.5
Rhsim13G0052500 Rhododendron simsii HOM05D002211 ORTHO05D002206 5.5e-25 117.9 141 51.8
Sopen09g020090 Solanum pennellii HOM05D002211 ORTHO05D002206 1.2e-24 116.7 148 48.0
Lsat_1_v5_gn_9_16221 Lactuca sativa HOM05D002211 ORTHO05D002206 4.7e-24 114.8 155 45.2
Potri.002G250800 Populus trichocarpa HOM05D002211 ORTHO05D002206 6.1e-24 114.4 137 46.7
Gorai.007G159300 Gossypium raimondii HOM05D002211 ORTHO05D002206 1.0e-23 113.6 132 47.7
CiPaw.13G055000 Carya illinoinensis HOM05D002211 ORTHO05D002206 3.0e-23 112.1 130 47.7
Thecc.01G211400 Theobroma cacao HOM05D002211 ORTHO05D002206 3.0e-23 112.1 132 47.7
COL.COLO4_38590 Corchorus olitorius HOM05D002211 ORTHO05D002206 5.2e-23 111.3 132 47.0
DCAR_012692 Daucus carota HOM05D002211 ORTHO05D002206 8.8e-23 110.5 130 47.7
Gohir.D11G148600 Gossypium hirsutum HOM05D002211 ORTHO05D002206 8.8e-23 110.5 132 46.2
Gohir.A11G142300 Gossypium hirsutum HOM05D002211 ORTHO05D002206 2.6e-22 109.0 132 46.2
TWI36G0467 Tripterygium wilfordii HOM05D002211 ORTHO05D002206 3.3e-22 108.6 135 46.7
ECA247G4066 Erigeron canadensis HOM05D002211 ORTHO05D002206 4.4e-22 108.2 147 44.2
Actinidia30019 Actinidia chinensis HOM05D002211 ORTHO05D002206 7.5e-22 107.5 137 46.7
Cc01_g16160 Coffea canephora HOM05D002211 ORTHO05D002206 7.5e-22 107.5 146 44.5
HanXRQChr16g0507881 Helianthus annuus HOM05D002211 ORTHO05D002206 7.5e-22 107.5 135 46.7
Medtr8g011470 Medicago truncatula HOM05D002211 ORTHO05D002206 7.5e-22 107.5 136 46.3
Oeu003632.1 Olea europaea HOM05D002211 ORTHO05D002206 9.7e-22 107.1 141 46.8
Ciclev10017076m.g Citrus clementina HOM05D002211 ORTHO05D002206 1.7e-21 106.3 142 45.1
Manes.12G053700 Manihot esculenta HOM05D002211 ORTHO05D002206 4.8e-21 104.8 142 46.5
Manes.13G054300 Manihot esculenta HOM05D002211 ORTHO05D002206 4.8e-21 104.8 143 45.5
vmacro14694 Vaccinium macrocarpon HOM05D002211 ORTHO05D002206 4.8e-21 104.8 140 47.1
MSTRG.17972 Avicennia marina HOM05D002211 ORTHO05D002206 6.3e-21 104.4 141 46.8
Migut.N00663 Erythranthe guttata HOM05D002211 ORTHO05D002206 6.3e-21 104.4 131 42.7
Rhsim01G0248800 Rhododendron simsii HOM05D002211 ORTHO05D002206 6.3e-21 104.4 131 50.4
MSTRG.18492 Avicennia marina HOM05D002211 ORTHO05D002206 8.3e-21 104.0 128 47.7
Haze_23452 Corylus avellana HOM05D002211 ORTHO05D002206 8.3e-21 104.0 129 46.5
Lj3g0001912 Lotus japonicus HOM05D002211 ORTHO05D002206 8.3e-21 104.0 140 47.1
Phvul.010G031300 Phaseolus vulgaris HOM05D002211 ORTHO05D002206 8.3e-21 104.0 132 50.0
VMungo0331G1849 Vigna mungo HOM05D002211 ORTHO05D002206 1.1e-20 103.6 126 51.6
Actinidia23360 Actinidia chinensis HOM05D002211 ORTHO05D002206 1.4e-20 103.2 140 47.1
Duzib138G0235 Durio zibethinus HOM05D002211 ORTHO05D002206 1.4e-20 103.2 129 45.7
Glyma.03G089800 Glycine max HOM05D002211 ORTHO05D002206 3.1e-20 102.1 131 50.4
Glyma.13G008000 Glycine max HOM05D002211 ORTHO05D002206 5.3e-20 101.3 133 48.1
Gohir.A07G196800 Gossypium hirsutum HOM05D002211 ORTHO05D002206 5.3e-20 101.3 132 44.7
vmacro02814 Vaccinium macrocarpon HOM05D002211 ORTHO05D002206 5.3e-20 101.3 161 41.0
Atru.chr6.3550 Acer truncatum HOM05D002211 ORTHO05D002206 2.0e-19 99.4 145 41.4
MSTRG.21304 Avicennia marina HOM05D002211 ORTHO05D002206 2.0e-19 99.4 144 41.7
Gohir.D07G167000 Gossypium hirsutum HOM05D002211 ORTHO05D002206 2.0e-19 99.4 134 43.3
Psat4g206640 Pisum sativum HOM05D002211 ORTHO05D002206 2.0e-19 99.4 139 41.0
Actinidia23790 Actinidia chinensis HOM05D002211 ORTHO05D002206 3.5e-19 98.6 122 43.4
CSS0050270 Camellia sinensis var. sinensis HOM05D002211 ORTHO05D002206 7.7e-19 97.4 132 41.7
Gorai.001G228600 Gossypium raimondii HOM05D002211 ORTHO05D002206 7.7e-19 97.4 132 43.9
Dinv10434 Davidia involucrata HOM05D002211 ORTHO05D002206 1.0e-18 97.1 133 46.6
MD05G1159900 Malus domestica HOM05D002211 ORTHO05D002206 1.0e-18 97.1 138 42.8
QL09p046170 Quercus lobata HOM05D002211 ORTHO05D002206 1.3e-18 96.7 122 45.9
arahy.Tifrunner.gnm1.ann1.0TX68Y Arachis hypogaea HOM05D002211 ORTHO05D002206 2.2e-18 95.9 133 46.6
Gohir.D07G203200 Gossypium hirsutum HOM05D002211 ORTHO05D002206 2.2e-18 95.9 132 43.2
Lsat_1_v5_gn_8_97941 Lactuca sativa HOM05D002211 ORTHO05D002206 2.2e-18 95.9 131 44.3
FAN27G0804 Fragaria x ananassa HOM05D002211 ORTHO05D002206 3.8e-18 95.1 139 43.9
CANSAT01G1044 Cannabis sativa HOM05D002211 ORTHO05D002206 6.5e-18 94.4 126 46.8
Glyma.18G152300 Glycine max HOM05D002211 ORTHO05D002206 6.5e-18 94.4 137 43.8
VMungo1383G1511 Vigna mungo HOM05D002211 ORTHO05D002206 8.5e-18 94.0 135 44.4
FvH4_2g17840 Fragaria vesca HOM05D002211 ORTHO05D002206 1.1e-17 93.6 135 44.4
HanXRQChr08g0231451 Helianthus annuus HOM05D002211 ORTHO05D002206 1.1e-17 93.6 142 39.4
Lsat_1_v5_gn_5_178360 Lactuca sativa HOM05D002211 ORTHO05D002206 1.1e-17 93.6 146 41.8
Lalb_Chr01g0022001 Lupinus albus HOM05D002211 ORTHO05D002206 1.1e-17 93.6 132 43.9
Gorai.N003500 Gossypium raimondii HOM05D002211 ORTHO05D002206 1.5e-17 93.2 131 41.2
RcHm_v2.0_Chr6g0282871 Rosa chinensis HOM05D002211 ORTHO05D002206 1.5e-17 93.2 135 43.7
Gohir.A07G159400 Gossypium hirsutum HOM05D002211 ORTHO05D002206 1.9e-17 92.8 132 41.7
CiPaw.14G043400 Carya illinoinensis HOM05D002211 ORTHO05D002206 2.5e-17 92.4 129 42.6
FAN15G0122 Fragaria x ananassa HOM05D002211 ORTHO05D002206 2.5e-17 92.4 139 42.4
FAN24G0249 Fragaria x ananassa HOM05D002211 ORTHO05D002206 2.5e-17 92.4 135 43.7
Prupe.8G190600 Prunus persica HOM05D002211 ORTHO05D002206 2.5e-17 92.4 135 44.4
arahy.Tifrunner.gnm1.ann1.PCV855 Arachis hypogaea HOM05D002211 ORTHO05D002206 3.2e-17 92.0 133 45.9
Sabra02G0190700 Salix brachista HOM05D002211 ORTHO05D002206 1.2e-16 90.1 165 36.4
GSVIVG01006232001 Vitis vinifera HOM05D002211 ORTHO05D002206 4.7e-16 88.2 127 45.7
Lalb_Chr03g0041111 Lupinus albus HOM05D002211 ORTHO05D002206 6.1e-16 87.8 123 45.5
Lj1g0027803 Lotus japonicus HOM05D002211 ORTHO05D002206 8.0e-16 87.4 123 46.3
Migut.D00729 Erythranthe guttata HOM05D002211 ORTHO05D002206 1.0e-15 87.0 149 40.3
Eucgr.H00728 Eucalyptus grandis HOM05D002211 ORTHO05D002206 1.0e-15 87.0 139 38.8
Glyma.08G344400 Glycine max HOM05D002211 ORTHO05D002206 6.8e-15 84.3 133 40.6
Peaxi162Scf00335g00096 Petunia axillaris HOM05D002211 ORTHO05D002206 8.8e-15 84.0 110 44.5
TPR.G28988 Trifolium pratense HOM05D002211 ORTHO05D002206 8.8e-15 84.0 116 42.2
Phvul.008G137200 Phaseolus vulgaris HOM05D002211 ORTHO05D002206 1.2e-14 83.6 125 45.6
SGA_v2.0_scaffold566G52949 Striga asiatica HOM05D002211 ORTHO05D002206 1.2e-14 83.6 141 40.4
MD10G1152300 Malus domestica HOM05D002211 ORTHO05D002206 1.5e-14 83.2 134 39.6
Psat3g151120 Pisum sativum HOM05D002211 ORTHO05D002206 2.6e-14 82.4 128 40.6
BcaC06g30788 Brassica carinata HOM05D002211 ORTHO05D002206 3.4e-14 82.0 153 40.5
unitig_0.g1220 Utricularia gibba HOM05D002211 ORTHO05D002206 3.4e-14 82.0 130 40.0
Cpa.g.sc8.75 Carica papaya HOM05D002211 ORTHO05D002206 5.7e-14 81.3 132 44.7
SalBow6G1551 Salvia bowleyana HOM05D002211 ORTHO05D002206 9.8e-14 80.5 89 49.4
THA.LOC104818996 Tarenaya hassleriana HOM05D002211 ORTHO05D002206 9.8e-14 80.5 149 38.3
Nitab4.5_0000489g0100 Nicotiana tabacum HOM05D001647 ORTHO05D001191 1.3e-13 80.1 45 84.4
Medtr7g052620 Medicago truncatula HOM05D002211 ORTHO05D002206 1.7e-13 79.7 134 41.0
HanXRQChr01g0007241 Helianthus annuus HOM05D002211 ORTHO05D002206 2.8e-13 79.0 133 39.8
Lalb_Chr07g0194521 Lupinus albus HOM05D002211 ORTHO05D002206 4.8e-13 78.2 125 43.2
TWI18G0790 Tripterygium wilfordii HOM05D002211 ORTHO05D002206 6.3e-13 77.8 128 41.4
PGR083G1506 Punica granatum HOM05D002211 ORTHO05D002206 1.4e-12 76.6 150 38.0
Thhalv10005044m.g Eutrema salsugineum HOM05D002211 ORTHO05D002206 2.4e-12 75.9 139 35.3
ECA248G1643 Erigeron canadensis HOM05D002211 ORTHO05D002206 4.1e-12 75.1 143 38.5
Nn5g27522 Nelumbo nucifera HOM05D002211 ORTHO05D002206 9.1e-12 73.9 146 33.6
CARHR183520 Cardamine hirsuta HOM05D002211 ORTHO05D002206 1.2e-11 73.6 143 35.7
SGA_v2.0_scaffold77G25293 Striga asiatica HOM05D002211 ORTHO05D002206 1.6e-11 73.2 140 38.6
TAR362G0774 Trochodendron aralioides HOM05D002211 ORTHO05D002206 1.6e-11 73.2 147 37.4
THA.LOC104822468 Tarenaya hassleriana HOM05D002211 ORTHO05D002206 2.7e-11 72.4 135 37.8
AL8G21370 Arabidopsis lyrata HOM05D002211 ORTHO05D002206 4.5e-11 71.6 143 35.7
AT5G48500 Arabidopsis thaliana HOM05D002211 ORTHO05D002206 4.5e-11 71.6 143 35.7
BcaC03g17656 Brassica carinata HOM05D002211 ORTHO05D002206 5.9e-11 71.2 144 38.2
C02p56580 Brassica napus HOM05D002211 ORTHO05D002206 5.9e-11 71.2 144 38.2
BolC2t11717H Brassica oleracea HOM05D002211 ORTHO05D002206 5.9e-11 71.2 144 38.2
ClCG09G008150 Citrullus lanatus HOM05D002211 ORTHO05D002206 5.9e-11 71.2 139 35.3
BcaB07g30027 Brassica carinata HOM05D002211 ORTHO05D002206 7.7e-11 70.9 140 36.4
EL10Ac5g10628 Beta vulgaris HOM05D002211 ORTHO05D002206 1.0e-10 70.5 154 35.1
A02p37510 Brassica napus HOM05D002211 ORTHO05D002206 1.0e-10 70.5 147 36.7
BraA02t08738Z Brassica rapa HOM05D002211 ORTHO05D002206 1.3e-10 70.1 141 33.3
TAR365G1226 Trochodendron aralioides HOM05D002211 ORTHO05D002206 1.3e-10 70.1 129 37.2
TAR633G0017 Trochodendron aralioides HOM05D002211 ORTHO05D002206 1.3e-10 70.1 156 35.9
BolC7t44440H Brassica oleracea HOM05D002211 ORTHO05D002206 2.3e-10 69.3 142 34.5
Sp2g18870 Schrenkiella parvula HOM05D002211 ORTHO05D002206 2.3e-10 69.3 135 34.8
BcaC06g30790 Brassica carinata HOM05D002211 ORTHO05D002206 2.9e-10 68.9 142 34.5
C07p39190 Brassica napus HOM05D002211 ORTHO05D002206 2.9e-10 68.9 142 34.5
Aqoxy5G00111 Aquilegia oxysepala HOM05D002211 ORTHO05D002206 5.0e-10 68.2 144 33.3
BraA06t26828Z Brassica rapa HOM05D002211 ORTHO05D002206 6.6e-10 67.8 143 33.6
A06p39140 Brassica napus HOM05D002211 ORTHO05D002206 8.6e-10 67.4 138 36.2
AUR62008124 Chenopodium quinoa HOM05D002211 ORTHO05D002206 8.6e-10 67.4 155 35.5
CsaV3_7G026890 Cucumis sativus L. HOM05D002211 ORTHO05D002206 8.6e-10 67.4 139 32.4
BcaC04g23772 Brassica carinata HOM05D002211 ORTHO05D002206 1.1e-09 67.0 137 35.8
C09p04850 Brassica napus HOM05D004226 ORTHO05D004842 1.1e-09 67.0 137 35.8
Lalb_Chr19g0126121 Lupinus albus HOM05D002211 ORTHO05D002206 2.5e-09 65.9 52 57.7
Sed0022694 Sechium edule HOM05D002211 ORTHO05D002206 2.5e-09 65.9 131 32.8
Aqoxy5G00107 Aquilegia oxysepala HOM05D002211 ORTHO05D002206 3.3e-09 65.5 143 34.3
A09p04550 Brassica napus HOM05D002211 ORTHO05D002206 3.3e-09 65.5 137 33.6
BraA09t36090Z Brassica rapa HOM05D002211 ORTHO05D002206 3.3e-09 65.5 137 33.6
Aa31sc1803G10 Aethionema arabicum HOM05D002211 ORTHO05D002206 4.2e-09 65.1 158 32.9
CDE02G4254 Ceratophyllum demersum HOM05D002211 ORTHO05D002206 4.2e-09 65.1 121 38.0
SHI10300 Sapria himalayana HOM05D002211 ORTHO05D002206 4.2e-09 65.1 162 32.7
Carub.0008s0808 Capsella rubella HOM05D002211 ORTHO05D002206 5.5e-09 64.7 148 35.1
Sed0012250 Sechium edule HOM05D002211 ORTHO05D002206 5.5e-09 64.7 133 32.3
BcaC06g30792 Brassica carinata HOM05D002211 ORTHO05D002206 7.2e-09 64.3 137 34.3
CDE11G1194 Ceratophyllum demersum HOM05D002211 ORTHO05D002206 1.2e-08 63.5 119 37.8
SHI10255 Sapria himalayana HOM05D002211 ORTHO05D002206 1.2e-08 63.5 130 36.2
unitig_0.g413 Utricularia gibba HOM05D002211 ORTHO05D002206 1.2e-08 63.5 103 38.8
MBI07_g44687_MAGBIO Magnolia biondii HOM05D002211 ORTHO05D002206 1.6e-08 63.2 121 38.0
Nn1g08275 Nelumbo nucifera HOM05D002211 ORTHO05D002206 1.6e-08 63.2 140 36.4
unitig_60.g25577 Utricularia gibba HOM05D002211 ORTHO05D002206 1.6e-08 63.2 51 56.9
DCAR_004766 Daucus carota HOM05D006769 ORTHO05D008522 3.6e-08 62.0 145 33.1
TPR.G26810 Trifolium pratense HOM05D002211 ORTHO05D002206 3.6e-08 62.0 52 57.7
CiPaw.07G075600 Carya illinoinensis HOM05D002211 ORTHO05D002206 6.1e-08 61.2 150 36.0
Psat3g005480 Pisum sativum HOM05D002211 ORTHO05D002206 1.0e-07 60.5 150 38.7
Cpa.g.sc51.66 Carica papaya HOM05D002211 ORTHO05D002206 1.4e-07 60.1 162 30.9
MBI07_g35241_MAGBIO Magnolia biondii HOM05D002211 ORTHO05D002206 1.4e-07 60.1 134 37.3
Ah.02g111170 Amaranthus hybridus HOM05D002211 ORTHO05D002206 1.8e-07 59.7 139 32.4
SGA_v2.0_scaffold13G06340 Striga asiatica HOM05D002211 ORTHO05D002206 1.8e-07 59.7 134 35.1
Prupe.6G355600 Prunus persica HOM05D002211 ORTHO05D002206 2.3e-07 59.3 157 30.6
VMungo0540G2450 Vigna mungo HOM05D002211 ORTHO05D002206 2.3e-07 59.3 163 33.7
Eucgr.K02089 Eucalyptus grandis HOM05D002211 ORTHO05D002206 3.0e-07 58.9 120 33.3
Phvul.006G108100 Phaseolus vulgaris HOM05D002211 ORTHO05D002206 5.2e-07 58.2 165 35.2
COL.COLO4_15265 Corchorus olitorius HOM05D002211 ORTHO05D002206 6.8e-07 57.8 45 57.8
Hund09466 Selenicereus undatus HOM05D002211 ORTHO05D002206 6.8e-07 57.8 134 35.1
Duzib177G1183 Durio zibethinus HOM05D002211 ORTHO05D002206 8.9e-07 57.4 168 33.9
Glyma.03G253400 Glycine max HOM05D002211 ORTHO05D002206 1.2e-06 57.0 138 37.7
Gohir.D11G250800 Gossypium hirsutum HOM05D002211 ORTHO05D002206 1.2e-06 57.0 178 31.5
Thecc.05G260900 Theobroma cacao HOM05D002211 ORTHO05D002206 1.5e-06 56.6 164 32.3
Haze_04489 Corylus avellana HOM05D002211 ORTHO05D002206 2.0e-06 56.2 147 36.7
Gohir.A11G241500 Gossypium hirsutum HOM05D002211 ORTHO05D002206 2.0e-06 56.2 181 30.9
Psat0s3038g0080 Pisum sativum HOM05D002211 ORTHO05D002206 2.0e-06 56.2 140 37.9
ATR0686G227 Amborella trichopoda HOM05D002211 ORTHO05D002206 2.6e-06 55.8 125 32.0
Eucgr.H04158 Eucalyptus grandis HOM05D002211 ORTHO05D002206 3.4e-06 55.5 137 32.8
Duzib106G0223 Durio zibethinus HOM05D002211 ORTHO05D002206 4.4e-06 55.1 157 35.0
Glyma.19G250900 Glycine max HOM05D002211 ORTHO05D002206 4.4e-06 55.1 158 33.5
Gorai.007G268900 Gossypium raimondii HOM05D002211 ORTHO05D002206 4.4e-06 55.1 172 32.0
Sopen04g021740 Solanum pennellii HOM05D002211 ORTHO05D002206 4.4e-06 55.1 105 40.0
TWI60G0660 Tripterygium wilfordii HOM05D002211 ORTHO05D002206 4.4e-06 55.1 144 31.2
Potri.019G029600 Populus trichocarpa HOM05D002211 ORTHO05D002206 5.7e-06 54.7 169 31.4
Lj1g0002409 Lotus japonicus HOM05D002211 ORTHO05D002206 7.5e-06 54.3 145 36.6
Ca_09451_v3 Cicer arietinum L. HOM05D002211 ORTHO05D002206 9.8e-06 53.9 164 36.6
Duzib128G1915 Durio zibethinus HOM05D002211 ORTHO05D002206 9.8e-06 53.9 159 33.3


User provided reference genes

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