Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002462g0020 Nicotiana tabacum HOM05D011801 ORTHO05D014157 7.9e-42 173.3 86 100.0
Nitab4.5_0005583g0090 Nicotiana tabacum HOM05D011801 ORTHO05D014157 5.7e-24 114.0 57 96.5
Solyc01g108390.3 Solanum lycopersicum HOM05D011801 ORTHO05D014157 1.3e-23 112.8 65 83.1
Sopen01g050610 Solanum pennellii HOM05D011801 ORTHO05D014157 1.3e-23 112.8 65 84.6
PGSC0003DMG400025896 Solanum tuberosum HOM05D011801 ORTHO05D014157 1.2e-21 106.3 67 79.1
CAN.G322.24 Capsicum annuum HOM05D011801 ORTHO05D014157 3.5e-21 104.8 67 80.6
Peaxi162Scf00016g00166 Petunia axillaris HOM05D011801 ORTHO05D014157 3.5e-21 104.8 63 79.4
CAN.G322.28 Capsicum annuum HOM05D011801 ORTHO05D014157 1.5e-19 99.4 66 66.7
Peaxi162Scf00003g00174 Petunia axillaris HOM05D011801 ORTHO05D014157 6.8e-17 90.5 65 64.6
Peaxi162Scf00658g00047 Petunia axillaris HOM05D011801 ORTHO05D014157 6.8e-17 90.5 73 60.3
Sopen01g050600 Solanum pennellii HOM05D011801 ORTHO05D014157 4.4e-16 87.8 66 56.1
Sopen01g050580 Solanum pennellii HOM05D011801 ORTHO05D014157 7.5e-16 87.0 66 56.1
Solyc01g108380.2 Solanum lycopersicum HOM05D011801 ORTHO05D014157 1.3e-15 86.3 66 54.5
PGSC0003DMG400042958 Solanum tuberosum HOM05D011801 ORTHO05D014157 3.7e-15 84.7 66 54.5
Nitab4.5_0029468g0010 Nicotiana tabacum HOM05D011801 ORTHO05D014157 1.2e-13 79.7 64 59.4
Gorai.009G312600 Gossypium raimondii HOM05D001004 ORTHO05D000653 1.2e-08 63.2 63 47.6
THA.LOC104805628 Tarenaya hassleriana HOM05D001004 ORTHO05D000653 1.5e-08 62.8 63 46.0
SalBow6G6111 Salvia bowleyana HOM05D001004 ORTHO05D000653 2.6e-08 62.0 63 44.4
Manes.05G086337 Manihot esculenta HOM05D001004 ORTHO05D000653 4.4e-08 61.2 68 44.1
Eucgr.D01653 Eucalyptus grandis HOM05D001004 ORTHO05D000653 5.7e-08 60.8 63 44.4
CARHR180000 Cardamine hirsuta HOM05D001004 ORTHO05D000653 7.5e-08 60.5 62 43.5
AT5G43580 Arabidopsis thaliana HOM05D001004 ORTHO05D000653 9.8e-08 60.1 63 44.4
COL.COLO4_12161 Corchorus olitorius HOM05D001004 ORTHO05D000653 9.8e-08 60.1 65 46.2
Thecc.10G077700 Theobroma cacao HOM05D001004 ORTHO05D000653 9.8e-08 60.1 63 42.9
Thecc.05G233000 Theobroma cacao HOM05D001004 ORTHO05D000653 1.7e-07 59.3 61 47.5
SalBow6G5036 Salvia bowleyana HOM05D001004 ORTHO05D000653 2.2e-07 58.9 76 36.8
EL10Ac5g10440 Beta vulgaris HOM05D001004 ORTHO05D000653 2.8e-07 58.5 62 45.2
Thecc.10G078100 Theobroma cacao HOM05D001004 ORTHO05D000653 2.8e-07 58.5 63 42.9
Actinidia08436 Actinidia chinensis HOM05D001004 ORTHO05D000653 3.7e-07 58.2 63 41.3
BcaB07g30343 Brassica carinata HOM05D001004 ORTHO05D000653 4.9e-07 57.8 65 50.8
Carub.0008s0505 Capsella rubella HOM05D001004 ORTHO05D000653 4.9e-07 57.8 63 42.9
Carub.0008s0506 Capsella rubella HOM05D001004 ORTHO05D000653 4.9e-07 57.8 63 42.9
Ciclev10022906m.g Citrus clementina HOM05D001004 ORTHO05D000653 4.9e-07 57.8 71 42.3
Eucgr.C02276 Eucalyptus grandis HOM05D001004 ORTHO05D000653 4.9e-07 57.8 72 38.9
Dinv44644 Davidia involucrata HOM05D001004 ORTHO05D000653 6.3e-07 57.4 63 42.9
PSO384G3535 Papaver somniferum HOM05D001004 ORTHO05D000653 6.3e-07 57.4 65 44.6
CSS0013364 Camellia sinensis var. sinensis HOM05D001004 ORTHO05D000653 8.3e-07 57.0 64 43.8
DCAR_011992 Daucus carota HOM05D001004 ORTHO05D000653 8.3e-07 57.0 57 49.1
SalBow6G2008 Salvia bowleyana HOM05D000195 ORTHO05D000653 8.3e-07 57.0 57 47.4
CSS0031008 Camellia sinensis var. sinensis HOM05D001004 ORTHO05D000653 1.1e-06 56.6 65 41.5
Migut.D00398 Erythranthe guttata HOM05D001004 ORTHO05D000653 1.1e-06 56.6 65 43.1
Manes.05G086318 Manihot esculenta HOM05D001004 ORTHO05D000653 1.1e-06 56.6 56 46.4
EL10Ac5g10441 Beta vulgaris HOM05D001004 ORTHO05D000653 1.4e-06 56.2 65 46.2
BraA04t18431Z Brassica rapa HOM05D001004 ORTHO05D000653 1.4e-06 56.2 62 46.8
Manes.05G086328 Manihot esculenta HOM05D001004 ORTHO05D000653 1.4e-06 56.2 63 41.3
Sp2g08390 Schrenkiella parvula HOM05D001004 ORTHO05D000653 1.4e-06 56.2 63 41.3
Sed0018468 Sechium edule HOM05D001004 ORTHO05D000653 1.4e-06 56.2 64 43.8
Actinidia05460 Actinidia chinensis HOM05D001004 ORTHO05D000653 1.8e-06 55.8 63 42.9
Dinv44643 Davidia involucrata HOM05D001004 ORTHO05D000653 1.8e-06 55.8 65 41.5
Thhalv10003305m.g Eutrema salsugineum HOM05D001004 ORTHO05D000653 3.1e-06 55.1 61 39.3
HanXRQChr01g0007271 Helianthus annuus HOM05D001004 ORTHO05D000653 3.1e-06 55.1 63 39.7
HanXRQChr01g0007331 Helianthus annuus HOM05D001004 ORTHO05D000653 3.1e-06 55.1 63 39.7
Prupe.8G229400 Prunus persica HOM05D001004 ORTHO05D000653 3.1e-06 55.1 63 36.5
SalBow6G3365 Salvia bowleyana HOM05D001004 ORTHO05D000653 3.1e-06 55.1 63 39.7
SalBow6G5398 Salvia bowleyana HOM05D001004 ORTHO05D000653 3.1e-06 55.1 68 38.2
Thecc.10G077800 Theobroma cacao HOM05D001004 ORTHO05D000653 3.1e-06 55.1 63 42.9
Thecc.10G078200 Theobroma cacao HOM05D001004 ORTHO05D000653 3.1e-06 55.1 63 42.9
Thecc.10G078300 Theobroma cacao HOM05D001004 ORTHO05D000653 3.1e-06 55.1 63 42.9
Carub.0004s2093 Capsella rubella HOM05D001004 ORTHO05D000653 4.1e-06 54.7 62 41.9
Migut.D00400 Erythranthe guttata HOM05D001004 ORTHO05D000653 4.1e-06 54.7 61 41.0
PSO339G6102 Papaver somniferum HOM05D001004 ORTHO05D000653 4.1e-06 54.7 55 49.1
Potri.005G221000 Populus trichocarpa HOM05D001004 ORTHO05D000653 4.1e-06 54.7 71 36.6
SalBow6G4960 Salvia bowleyana HOM05D001004 ORTHO05D000653 4.1e-06 54.7 68 41.2
Actinidia08437 Actinidia chinensis HOM05D001004 ORTHO05D000653 5.4e-06 54.3 63 38.1
CARHR133600 Cardamine hirsuta HOM05D001004 ORTHO05D000653 5.4e-06 54.3 62 40.3
COL.COLO4_38470 Corchorus olitorius HOM05D001004 ORTHO05D000653 5.4e-06 54.3 65 38.5
Migut.A00975 Erythranthe guttata HOM05D001004 ORTHO05D000653 5.4e-06 54.3 63 41.3
Migut.N02177 Erythranthe guttata HOM05D001004 ORTHO05D000653 5.4e-06 54.3 61 42.6
AT3G46860 Arabidopsis thaliana HOM05D001004 ORTHO05D000653 7.0e-06 53.9 62 40.3
CSS0007138 Camellia sinensis var. sinensis HOM05D001004 ORTHO05D000653 7.0e-06 53.9 63 41.3
Cc03_g04970 Coffea canephora HOM05D001004 ORTHO05D000653 7.0e-06 53.9 61 44.3
Cc03_g04980 Coffea canephora HOM05D001004 ORTHO05D000653 7.0e-06 53.9 62 43.5
Eucgr.I00166 Eucalyptus grandis HOM05D001004 ORTHO05D000653 7.0e-06 53.9 62 43.5
HanXRQChr01g0014531 Helianthus annuus HOM05D001004 ORTHO05D000653 7.0e-06 53.9 63 39.7
HanXRQChr01g0014551 Helianthus annuus HOM05D001004 ORTHO05D000653 7.0e-06 53.9 62 37.1
Hma1.2p1_0650F.1_g195520 Hydrangea macrophylla HOM05D001004 ORTHO05D000653 7.0e-06 53.9 70 35.7
PSO384G5145 Papaver somniferum HOM05D001004 ORTHO05D000653 7.0e-06 53.9 65 43.1
Prupe.8G213200 Prunus persica HOM05D001004 ORTHO05D000653 7.0e-06 53.9 70 40.0
QL06p015886 Quercus lobata HOM05D001004 ORTHO05D000653 7.0e-06 53.9 63 38.1
Thecc.10G077900 Theobroma cacao HOM05D001004 ORTHO05D000653 7.0e-06 53.9 63 41.3
CSS0019702 Camellia sinensis var. sinensis HOM05D001004 ORTHO05D000653 9.2e-06 53.5 64 45.3
CSS0028717 Camellia sinensis var. sinensis HOM05D001004 ORTHO05D000653 9.2e-06 53.5 63 39.7
Ciclev10006212m.g Citrus clementina HOM05D001004 ORTHO05D000653 9.2e-06 53.5 60 45.0
Ciclev10022909m.g Citrus clementina HOM05D001004 ORTHO05D000653 9.2e-06 53.5 71 40.8
Duzib114G0743 Durio zibethinus HOM05D001004 ORTHO05D000653 9.2e-06 53.5 63 41.3
Eucgr.I00167 Eucalyptus grandis HOM05D001004 ORTHO05D000653 9.2e-06 53.5 62 43.5
Oeu032586.1 Olea europaea HOM05D001004 ORTHO05D000653 9.2e-06 53.5 61 42.6
Potri.010G075300 Populus trichocarpa HOM05D001004 ORTHO05D000653 9.2e-06 53.5 63 38.1
Potri.010G075501 Populus trichocarpa HOM05D001004 ORTHO05D000653 9.2e-06 53.5 63 38.1


User provided reference genes

Program Settings