Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002456g0110 Nicotiana tabacum HOM05D004323 ORTHO05D005140 2.1e-138 496.1 271 100.0
Nitab4.5_0003598g0060 Nicotiana tabacum HOM05D004323 ORTHO05D005140 3.4e-128 462.2 271 94.1
PGSC0003DMG400030599 Solanum tuberosum HOM05D004323 ORTHO05D005140 1.7e-119 433.3 273 87.2
Solyc02g091270.3 Solanum lycopersicum HOM05D004323 ORTHO05D005140 5.0e-119 431.8 273 82.4
Sopen02g035890 Solanum pennellii HOM05D004323 ORTHO05D005140 4.1e-113 412.1 273 78.8
CAN.G625.75 Capsicum annuum HOM05D004323 ORTHO05D005140 5.9e-112 408.3 268 81.7
Dinv19000 Davidia involucrata HOM05D004323 ORTHO05D005140 1.9e-102 376.7 271 70.1
Dinv14868 Davidia involucrata HOM05D004323 ORTHO05D005140 1.7e-95 353.6 271 67.2
Peaxi162Scf00803g00424 Petunia axillaris HOM05D004323 ORTHO05D005140 5.0e-95 352.1 233 85.8
CSS0029895 Camellia sinensis var. sinensis HOM05D004323 ORTHO05D005140 6.5e-95 351.7 271 65.7
vmacro05495 Vaccinium macrocarpon HOM05D004323 ORTHO05D005140 3.6e-93 345.9 271 66.1
Cc07_g08280 Coffea canephora HOM05D004323 ORTHO05D005140 2.3e-92 343.2 273 73.3
Rhsim10G0078500 Rhododendron simsii HOM05D004323 ORTHO05D005140 4.0e-92 342.4 284 63.4
Dinv33986 Davidia involucrata HOM05D004323 ORTHO05D005140 7.5e-91 338.2 245 69.4
Hma1.2p1_0500F.1_g166900 Hydrangea macrophylla HOM05D004323 ORTHO05D005140 4.1e-89 332.4 308 58.1
Hma1.2p1_1820F.1_g304196 Hydrangea macrophylla HOM05D004323 ORTHO05D005140 4.1e-89 332.4 308 58.1
GSVIVG01030895001 Vitis vinifera HOM05D004323 ORTHO05D005140 2.3e-84 316.6 273 63.7
DCAR_010732 Daucus carota HOM05D004323 ORTHO05D005140 6.8e-84 315.1 278 62.9
Cfa007861 Carpinus fangiana HOM05D004323 ORTHO05D007831 2.6e-83 313.2 273 62.3
Lj2C436T13 Lonicera japonica HOM05D004323 ORTHO05D005140 6.3e-82 308.5 307 56.7
Haze_14209 Corylus avellana HOM05D004323 ORTHO05D007831 2.3e-79 300.1 290 57.9
Thecc.04G123700 Theobroma cacao HOM05D004323 ORTHO05D005140 1.1e-78 297.7 276 59.1
TAR629G2255 Trochodendron aralioides HOM05D004323 ORTHO05D005140 1.1e-78 297.7 273 58.2
TAR622G1143 Trochodendron aralioides HOM05D004323 ORTHO05D005140 2.5e-78 296.6 271 59.0
Duzib133G0462 Durio zibethinus HOM05D004323 ORTHO05D005140 3.3e-78 296.2 275 60.0
COL.COLO4_27122 Corchorus olitorius HOM05D004323 ORTHO05D005140 6.1e-77 292.0 281 58.0
Actinidia17651 Actinidia chinensis HOM05D004323 ORTHO05D005140 8.0e-77 291.6 271 62.0
Sc14g0004810 Simmondsia chinensis HOM05D004323 ORTHO05D005140 1.0e-76 291.2 274 60.9
HanXRQChr12g0375961 Helianthus annuus HOM05D004323 ORTHO05D005140 1.2e-75 287.7 276 58.0
Gohir.D11G173500 Gossypium hirsutum HOM05D004323 ORTHO05D005140 5.7e-75 285.4 273 57.1
Gorai.007G185800 Gossypium raimondii HOM05D004323 ORTHO05D005140 5.7e-75 285.4 273 57.1
CiPaw.03G067400 Carya illinoinensis HOM05D004323 ORTHO05D005140 7.5e-75 285.0 272 57.0
Gohir.A11G167200 Gossypium hirsutum HOM05D004323 ORTHO05D005140 1.1e-73 281.2 273 56.4
ECA246G3962 Erigeron canadensis HOM05D004323 ORTHO05D005140 3.2e-73 279.6 275 57.1
Nn4g24090 Nelumbo nucifera HOM05D004323 ORTHO05D005140 2.7e-72 276.6 271 57.2
Hund14974 Selenicereus undatus HOM05D004323 ORTHO05D005140 7.8e-72 275.0 287 57.5
Ah.02g115750 Amaranthus hybridus HOM05D004323 ORTHO05D005140 2.3e-71 273.5 282 55.7
SalBow7G2861 Salvia bowleyana HOM05D004323 ORTHO05D005140 3.9e-71 272.7 266 60.2
EL10Ac5g11852 Beta vulgaris HOM05D004323 ORTHO05D005140 5.6e-70 268.9 295 53.6
Potri.010G114900 Populus trichocarpa HOM05D004323 ORTHO05D005140 3.6e-69 266.2 271 55.7
Prupe.3G151600 Prunus persica HOM05D004323 ORTHO05D005140 1.8e-68 263.8 278 54.3
Manes.02G073900 Manihot esculenta HOM05D004323 ORTHO05D005140 5.2e-68 262.3 275 56.0
Potri.008G127900 Populus trichocarpa HOM05D004323 ORTHO05D005140 1.2e-67 261.2 266 55.6
Sabra08G0096600 Salix brachista HOM05D004323 ORTHO05D005140 1.5e-67 260.8 267 55.1
Migut.L00479 Erythranthe guttata HOM05D004323 ORTHO05D005140 2.6e-67 260.0 282 53.9
unitig_748.g8745 Utricularia gibba HOM05D004323 ORTHO05D005140 2.6e-67 260.0 295 53.9
Sabra10G0085000 Salix brachista HOM05D004323 ORTHO05D005140 9.8e-67 258.1 268 56.7
CsaV3_5G010330 Cucumis sativus L. HOM05D004323 ORTHO05D005140 1.3e-66 257.7 284 52.5
Oeu030805.1 Olea europaea HOM05D004323 ORTHO05D005140 1.7e-66 257.3 282 52.5
SalBow1G3118 Salvia bowleyana HOM05D004323 ORTHO05D005140 1.1e-65 254.6 220 61.8
FAN07G1710 Fragaria x ananassa HOM05D004323 ORTHO05D005140 1.4e-65 254.2 269 53.2
SGA_v2.0_scaffold174G39287 Striga asiatica HOM05D004323 ORTHO05D005140 1.9e-65 253.8 280 55.0
Haze_11028 Corylus avellana HOM05D004323 ORTHO05D005140 2.4e-65 253.4 275 54.5
FAN22G0457 Fragaria x ananassa HOM05D004323 ORTHO05D005140 3.2e-65 253.1 269 52.8
Potri.004G092200 Populus trichocarpa HOM05D004323 ORTHO05D005140 5.4e-65 252.3 272 55.5
RcHm_v2.0_Chr4g0440951 Rosa chinensis HOM05D004323 ORTHO05D005140 7.0e-65 251.9 269 53.2
FvH4_4g32210 Fragaria vesca HOM05D004323 ORTHO05D005140 9.2e-65 251.5 269 52.4
FAN12G1900 Fragaria x ananassa HOM05D004323 ORTHO05D005140 9.2e-65 251.5 269 52.4
CiPaw.05G248000 Carya illinoinensis HOM05D004323 ORTHO05D005140 1.2e-64 251.1 267 52.8
Ciclev10015960m.g Citrus clementina HOM05D004323 ORTHO05D005140 1.2e-64 251.1 272 53.7
CANSAT01G2279 Cannabis sativa HOM05D004323 ORTHO05D005140 2.7e-64 250.0 290 53.1
FAN17G1549 Fragaria x ananassa HOM05D004323 ORTHO05D005140 6.0e-64 248.8 269 52.4
Eucgr.F02814 Eucalyptus grandis HOM05D004323 ORTHO05D005140 3.0e-63 246.5 271 50.2
Zm00001eb053510 Zea mays HOM05D004323 ORTHO05D005140 3.0e-63 246.5 274 52.2
Cfa008584 Carpinus fangiana HOM05D004323 ORTHO05D005140 3.9e-63 246.1 275 53.1
Gohir.A07G076100 Gossypium hirsutum HOM05D004323 ORTHO05D005140 1.9e-62 243.8 238 56.7
Os01g0507500 Oryza sativa ssp. japonica HOM05D004323 ORTHO05D005140 1.9e-62 243.8 273 53.5
CDE09G0723 Ceratophyllum demersum HOM05D004323 ORTHO05D005140 3.3e-62 243.0 277 52.3
Prupe.1G322700 Prunus persica HOM05D004323 ORTHO05D005140 3.3e-62 243.0 272 52.2
QL01p002128 Quercus lobata HOM05D004323 ORTHO05D005140 3.3e-62 243.0 277 57.4
Gorai.001G085700 Gossypium raimondii HOM05D004323 ORTHO05D005140 4.3e-62 242.7 235 57.9
MD13G1027200 Malus domestica HOM05D004323 ORTHO05D005140 9.5e-62 241.5 271 50.9
Manes.15G126000 Manihot esculenta HOM05D004323 ORTHO05D005140 9.5e-62 241.5 271 56.1
Atru.chr11.379 Acer truncatum HOM05D004323 ORTHO05D005140 2.1e-61 240.4 274 52.9
Gohir.D07G080600 Gossypium hirsutum HOM05D004323 ORTHO05D005140 3.6e-61 239.6 235 57.0
Ciclev10012163m.g Citrus clementina HOM05D004323 ORTHO05D005140 1.1e-60 238.0 272 51.1
Zm00001eb217130 Zea mays HOM05D004323 ORTHO05D005140 6.8e-60 235.3 273 50.2
Glyma.20G125700 Glycine max HOM05D004323 ORTHO05D005140 8.9e-60 235.0 276 51.4
HPP92_006392 Vanilla planifolia HOM05D004323 ORTHO05D005140 8.9e-60 235.0 268 53.7
VMungo0720G0280 Vigna mungo HOM05D004323 ORTHO05D005140 1.5e-59 234.2 271 50.9
Cpa.g.sc116.11 Carica papaya HOM05D004323 ORTHO05D005140 2.6e-59 233.4 277 53.1
Oeu041976.1 Olea europaea HOM05D004323 ORTHO05D005140 2.6e-59 233.4 180 68.3
Sed0006370 Sechium edule HOM05D004323 ORTHO05D005140 2.6e-59 233.4 274 50.7
ClCG07G004410 Citrullus lanatus HOM05D004323 ORTHO05D005140 4.4e-59 232.6 281 55.5
MD09G1260000 Malus domestica HOM05D004323 ORTHO05D005140 1.3e-58 231.1 279 49.8
Glyma.10G264800 Glycine max HOM05D004323 ORTHO05D005140 1.7e-58 230.7 274 51.8
Aqoxy3G03961 Aquilegia oxysepala HOM05D004323 ORTHO05D005140 2.2e-58 230.3 273 49.1
TWI53G1939 Tripterygium wilfordii HOM05D004323 ORTHO05D005140 3.7e-58 229.6 277 53.4
Eucgr.C01716 Eucalyptus grandis HOM05D004323 ORTHO05D005140 6.4e-58 228.8 267 50.2
Phvul.007G037100 Phaseolus vulgaris HOM05D004323 ORTHO05D005140 8.3e-58 228.4 275 50.2
PSO063G1150 Papaver somniferum HOM05D004323 ORTHO05D005140 1.4e-57 227.6 284 49.6
PGR004G1785 Punica granatum HOM05D004323 ORTHO05D005140 1.4e-57 227.6 271 50.2
MD16G1030300 Malus domestica HOM05D004323 ORTHO05D005140 4.1e-57 226.1 271 48.3
PSO782G4339 Papaver somniferum HOM05D004323 ORTHO05D005140 4.1e-57 226.1 283 47.7
Atru.chr1.1769 Acer truncatum HOM05D004323 ORTHO05D005140 5.4e-57 225.7 271 49.1
Sabra04G0062000 Salix brachista HOM05D004323 ORTHO05D005140 7.1e-57 225.3 331 44.7
Lj5g0025367 Lotus japonicus HOM05D004323 ORTHO05D005140 1.2e-56 224.6 271 48.3
TWI79G0055 Tripterygium wilfordii HOM05D004323 ORTHO05D005140 1.2e-56 224.6 271 49.4
Lj5g0009857 Lotus japonicus HOM05D004323 ORTHO05D005140 2.1e-56 223.8 271 48.7
arahy.Tifrunner.gnm1.ann1.B1S40C Arachis hypogaea HOM05D004323 ORTHO05D005140 2.7e-56 223.4 275 49.1
arahy.Tifrunner.gnm1.ann1.JPDL6B Arachis hypogaea HOM05D004323 ORTHO05D005140 2.7e-56 223.4 275 49.1
Cpa.g.sc65.119 Carica papaya HOM05D004323 ORTHO05D005140 6.0e-56 222.2 234 56.0
Nn3g18066 Nelumbo nucifera HOM05D004323 ORTHO05D005140 3.9e-55 219.5 182 64.3
Lalb_Chr02g0145481 Lupinus albus HOM05D004323 ORTHO05D005140 2.5e-54 216.9 280 48.2
Lalb_Chr06g0165621 Lupinus albus HOM05D004323 ORTHO05D005140 2.5e-54 216.9 278 48.2
Ca_17253_v3 Cicer arietinum L. HOM05D004323 ORTHO05D005140 5.6e-54 215.7 277 49.5
Psat7g004960 Pisum sativum HOM05D004323 ORTHO05D005140 1.6e-53 214.2 277 48.4
BraA07t31307Z Brassica rapa HOM05D004323 ORTHO05D005140 3.6e-53 213.0 274 50.0
AUR62030721 Chenopodium quinoa HOM05D004323 ORTHO05D005140 3.6e-53 213.0 125 82.4
Psat7g006200 Pisum sativum HOM05D004323 ORTHO05D005140 3.6e-53 213.0 273 48.4
MBI16_g32956_MAGBIO Magnolia biondii HOM05D004323 ORTHO05D005140 4.7e-53 212.6 235 54.0
A07p37500 Brassica napus HOM05D004323 ORTHO05D005140 1.4e-52 211.1 274 49.3
Medtr8g105830 Medicago truncatula HOM05D004323 ORTHO05D005140 1.4e-52 211.1 279 47.3
BolC6t39576H Brassica oleracea HOM05D004323 ORTHO05D005140 5.2e-52 209.1 274 49.3
AL2G30660 Arabidopsis lyrata HOM05D004323 ORTHO05D005140 6.8e-52 208.8 276 50.0
Thhalv10018840m.g Eutrema salsugineum HOM05D004323 ORTHO05D005140 1.2e-51 208.0 226 56.2
BcaB03g14869 Brassica carinata HOM05D004323 ORTHO05D005140 1.5e-51 207.6 279 50.9
Sp5g26250 Schrenkiella parvula HOM05D004323 ORTHO05D005140 1.5e-51 207.6 277 49.1
AT1G71080 Arabidopsis thaliana HOM05D004323 ORTHO05D005140 2.6e-51 206.8 270 48.5
ATR0326G041 Amborella trichopoda HOM05D004323 ORTHO05D005140 4.4e-51 206.1 275 48.4
C06p45200 Brassica napus HOM05D004323 ORTHO05D005140 4.4e-51 206.1 274 48.9
BcaC08g46546 Brassica carinata HOM05D004323 ORTHO05D005140 1.7e-50 204.1 273 52.4
CSS0030424 Camellia sinensis var. sinensis HOM05D004323 ORTHO05D005140 1.9e-49 200.7 180 60.0
Carub.0002s1789 Capsella rubella HOM05D004323 ORTHO05D005140 3.2e-49 199.9 272 48.9
THA.LOC104810161 Tarenaya hassleriana HOM05D004323 ORTHO05D005140 9.2e-49 198.4 227 50.7
Aa31LG4G9980 Aethionema arabicum HOM05D004323 ORTHO05D005140 3.5e-48 196.4 255 50.2
unitig_32.g11885 Utricularia gibba HOM05D004323 ORTHO05D005140 3.5e-48 196.4 273 46.9
CARHR064370 Cardamine hirsuta HOM05D004323 ORTHO05D005140 1.0e-47 194.9 272 48.5
CDE08G1420 Ceratophyllum demersum HOM05D004323 ORTHO05D005140 1.7e-47 194.1 262 48.9
PGR119G1370 Punica granatum HOM05D004323 ORTHO05D005140 2.3e-47 193.7 280 50.4
PSO063G0228 Papaver somniferum HOM05D004323 ORTHO05D005140 3.0e-47 193.4 124 72.6
THA.LOC104805595 Tarenaya hassleriana HOM05D004323 ORTHO05D005140 1.6e-45 187.6 284 44.7
SHI04771 Sapria himalayana HOM05D004323 ORTHO05D005140 5.8e-43 179.1 267 43.4
CSS0049640 Camellia sinensis var. sinensis HOM05D004323 ORTHO05D005140 7.6e-43 178.7 179 55.9
TWI75G0714 Tripterygium wilfordii HOM05D004323 ORTHO05D005140 9.9e-43 178.3 229 46.7
CARHR214700 Cardamine hirsuta HOM05D004323 ORTHO05D005140 6.4e-42 175.6 127 66.9
SEGI_02231 Sequoiadendron giganteum HOM05D004323 ORTHO05D005140 3.2e-41 173.3 191 51.3
Sp7g04050 Schrenkiella parvula HOM05D004323 ORTHO05D005140 3.0e-39 166.8 271 41.0
Thhalv10027858m.g Eutrema salsugineum HOM05D004323 ORTHO05D005140 3.9e-39 166.4 122 63.9
SMO268G0019 Selaginella moellendorffii HOM05D004323 ORTHO05D005140 4.3e-38 162.9 120 67.5
AT5G38050 Arabidopsis thaliana HOM05D004323 ORTHO05D005140 5.6e-38 162.5 274 40.1
Carub.0005s1233 Capsella rubella HOM05D004323 ORTHO05D005140 1.3e-34 151.4 274 40.1
AUR62036351 Chenopodium quinoa HOM05D004323 ORTHO05D005140 7.1e-33 145.6 230 43.5
AagrBONN_evm.TU.Sc2ySwM_344.4471 Anthoceros agrestis HOM05D004323 ORTHO05D005140 9.3e-33 145.2 125 58.4
AagrBONN_evm.TU.Sc2ySwM_117.2431 Anthoceros agrestis HOM05D004323 ORTHO05D005140 1.2e-32 144.8 119 60.5
Aa31LG9G17280 Aethionema arabicum HOM05D004323 ORTHO05D004022 7.9e-32 142.1 121 58.7
Mapoly0014s0191 Marchantia polymorpha HOM05D004323 ORTHO05D005140 2.3e-31 140.6 114 62.3
BcaB06g27162 Brassica carinata HOM05D004323 ORTHO05D005140 1.5e-30 137.9 126 57.1
Pp3c18_1330 Physcomitrium patens HOM05D004323 ORTHO05D005140 1.9e-30 137.5 118 61.0
Pp3c21_20610 Physcomitrium patens HOM05D004323 ORTHO05D005140 1.6e-29 134.4 118 60.2
FvH4_7g01202 Fragaria vesca HOM05D004323 ORTHO05D005140 3.2e-25 120.2 75 77.3
CSS0012754 Camellia sinensis var. sinensis HOM05D004323 ORTHO05D005140 1.1e-20 105.1 108 56.5
CBR_g81558 Chara braunii HOM05D004323 ORTHO05D005140 1.1e-20 105.1 248 31.5
Lsat_1_v5_gn_3_83040 Lactuca sativa HOM05D004323 ORTHO05D005140 2.4e-20 104.0 123 51.2
BcaB05g24642 Brassica carinata HOM05D004323 ORTHO05D005140 5.8e-19 99.4 189 41.3
Duzib138G1259 Durio zibethinus HOM05D004323 ORTHO05D005140 1.8e-12 77.8 122 43.4
AL7G52902 Arabidopsis lyrata HOM05D004323 ORTHO05D005140 2.6e-11 73.9 55 61.8
MELO3C018369.2 Cucumis melo HOM05D004323 ORTHO05D005140 3.2e-09 67.0 94 42.6
FAN16G1718 Fragaria x ananassa HOM05D004323 ORTHO05D005140 3.6e-08 63.5 46 65.2


User provided reference genes

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