Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002456g0100 Nicotiana tabacum HOM05D007637 ORTHO05D009508 6.8e-44 180.3 90 100.0
Nitab4.5_0005700g0020 Nicotiana tabacum HOM05D007637 ORTHO05D009508 3.1e-36 154.8 98 84.7
Nitab4.5_0002456g0080 Nicotiana tabacum HOM05D007637 ORTHO05D009508 2.3e-23 112.1 108 63.9
Solyc02g091193.1 Solanum lycopersicum HOM05D007637 ORTHO05D009508 3.2e-17 91.7 105 53.3
PGSC0003DMG400030637 Solanum tuberosum HOM05D007637 ORTHO05D009508 2.1e-16 89.0 98 56.1
Nitab4.5_0002644g0060 Nicotiana tabacum HOM05D007637 ORTHO05D009508 4.3e-14 81.3 103 46.6
PGSC0003DMG400010395 Solanum tuberosum HOM05D007637 ORTHO05D009508 2.8e-13 78.6 70 58.6
arahy.Tifrunner.gnm1.ann1.AC9JIC Arachis hypogaea HOM05D007637 ORTHO05D009508 8.4e-10 67.0 70 45.7
arahy.Tifrunner.gnm1.ann1.BY2X14 Arachis hypogaea HOM05D007637 ORTHO05D009508 8.4e-10 67.0 70 45.7
DCAR_010721 Daucus carota HOM05D007637 ORTHO05D009508 5.4e-09 64.3 66 50.0
Sabra04G0062800 Salix brachista HOM05D007637 ORTHO05D009508 7.1e-09 63.9 66 53.0
TPR.G28401 Trifolium pratense HOM05D007637 ORTHO05D009508 7.1e-09 63.9 65 49.2
Oeu047428.1 Olea europaea HOM05D007637 ORTHO05D009508 2.7e-08 62.0 60 48.3
CSS0034381 Camellia sinensis var. sinensis HOM05D007637 ORTHO05D009508 4.6e-08 61.2 52 57.7
Medtr7g082920 Medicago truncatula HOM05D007637 ORTHO05D009508 7.8e-08 60.5 66 48.5
Thecc.04G125100 Theobroma cacao HOM05D007637 ORTHO05D009508 1.0e-07 60.1 66 48.5
Lj1g0007116 Lotus japonicus HOM05D007637 ORTHO05D009508 3.0e-07 58.5 92 37.0
CiPaw.04G044900 Carya illinoinensis HOM05D007637 ORTHO05D009508 6.6e-07 57.4 68 41.2
Eucgr.J01538 Eucalyptus grandis HOM05D007637 ORTHO05D009508 8.7e-07 57.0 59 49.2
Manes.02G073000 Manihot esculenta HOM05D007637 ORTHO05D009508 8.7e-07 57.0 65 47.7
Dinv14862 Davidia involucrata HOM05D007637 ORTHO05D009508 1.1e-06 56.6 69 47.8
Gohir.A07G075400 Gossypium hirsutum HOM05D007637 ORTHO05D009508 1.1e-06 56.6 66 48.5
Psat3g096920 Pisum sativum HOM05D007637 ORTHO05D009508 1.1e-06 56.6 69 46.4
Rhsim10G0078100 Rhododendron simsii HOM05D007637 ORTHO05D009508 1.1e-06 56.6 48 54.2
Atru.chr1.1552 Acer truncatum HOM05D007637 ORTHO05D009508 1.5e-06 56.2 68 48.5
Eucgr.J01537 Eucalyptus grandis HOM05D007637 ORTHO05D009508 1.5e-06 56.2 58 50.0
PGR042G0465 Punica granatum HOM05D007637 ORTHO05D009508 1.9e-06 55.8 59 50.8
Duzib133G0287 Durio zibethinus HOM05D007637 ORTHO05D009508 2.5e-06 55.5 43 55.8
Manes.06G062300 Manihot esculenta HOM05D007637 ORTHO05D009508 2.5e-06 55.5 64 43.8
Oeu007437.1 Olea europaea HOM05D007637 ORTHO05D009508 3.3e-06 55.1 43 53.5
Potri.017G122100 Populus trichocarpa HOM05D007637 ORTHO05D009508 3.3e-06 55.1 43 62.8
GSVIVG01030918001 Vitis vinifera HOM05D007637 ORTHO05D009508 3.3e-06 55.1 69 46.4
Eucgr.J01536 Eucalyptus grandis HOM05D007637 ORTHO05D009508 4.3e-06 54.7 57 47.4
SalBow3G1214 Salvia bowleyana HOM05D007637 ORTHO05D009508 4.3e-06 54.7 44 63.6
SalBow3G3066 Salvia bowleyana HOM05D007637 ORTHO05D009508 4.3e-06 54.7 44 63.6
Cpa.g.sc116.6 Carica papaya HOM05D007637 ORTHO05D009508 5.6e-06 54.3 39 64.1
Manes.01G114400 Manihot esculenta HOM05D007637 ORTHO05D009508 5.6e-06 54.3 85 35.3
GSVIVG01030917001 Vitis vinifera HOM05D007637 ORTHO05D009508 5.6e-06 54.3 69 46.4
Gohir.D07G079900 Gossypium hirsutum HOM05D007637 ORTHO05D009508 7.3e-06 53.9 66 47.0
Gorai.001G084700 Gossypium raimondii HOM05D007637 ORTHO05D009508 7.3e-06 53.9 66 47.0
Lalb_Chr17g0336081 Lupinus albus HOM05D007637 ORTHO05D009508 7.3e-06 53.9 35 65.7
Phvul.008G009500 Phaseolus vulgaris HOM05D007637 ORTHO05D009508 7.3e-06 53.9 63 46.0
Rhsim10G0078000 Rhododendron simsii HOM05D007637 ORTHO05D009508 7.3e-06 53.9 33 66.7
Ciclev10013623m.g Citrus clementina HOM05D007637 ORTHO05D009508 9.6e-06 53.5 66 42.4
Haze_14202 Corylus avellana HOM05D007637 ORTHO05D009508 9.6e-06 53.5 70 40.0


User provided reference genes

Program Settings