Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002450g0080 Nicotiana tabacum HOM05D006057 ORTHO05D007224 8.2e-62 240.4 134 100.0
Nitab4.5_0002046g0150 Nicotiana tabacum HOM05D006057 ORTHO05D007224 2.2e-59 232.3 134 97.0
Sopen03g037330 Solanum pennellii HOM05D006057 ORTHO05D007224 8.8e-56 220.3 134 91.8
Solyc03g118440.3 Solanum lycopersicum HOM05D006057 ORTHO05D007224 2.6e-55 218.8 134 91.0
PGSC0003DMG400014183 Solanum tuberosum HOM05D006057 ORTHO05D007224 1.3e-54 216.5 134 89.6
Peaxi162Scf00314g00430 Petunia axillaris HOM05D006057 ORTHO05D007224 4.8e-54 214.5 134 89.6
CAN.G843.33 Capsicum annuum HOM05D006057 ORTHO05D007224 7.2e-50 200.7 133 82.7
Nitab4.5_0001841g0090 Nicotiana tabacum HOM05D006057 ORTHO05D007224 6.6e-43 177.6 141 75.2
Nitab4.5_0010904g0040 Nicotiana tabacum HOM05D006057 ORTHO05D007224 8.0e-41 170.6 141 71.6
Hma1.2p1_0350F.1_g132530 Hydrangea macrophylla HOM05D006057 ORTHO05D007224 1.4e-37 159.8 133 69.9
vmacro02351 Vaccinium macrocarpon HOM05D006057 ORTHO05D007224 5.4e-37 157.9 134 66.4
CSS0031729 Camellia sinensis var. sinensis HOM05D006057 ORTHO05D007224 1.3e-35 153.3 134 64.2
Rhsim01G0001300 Rhododendron simsii HOM05D006057 ORTHO05D007224 2.3e-35 152.5 134 64.2
Oeu048368.1 Olea europaea HOM05D006057 ORTHO05D007224 5.0e-35 151.4 121 70.2
Lju2566A1T37 Lonicera japonica HOM05D006057 ORTHO05D007224 1.0e-32 143.7 129 63.6
Migut.L01023 Erythranthe guttata HOM05D006057 ORTHO05D007224 1.4e-32 143.3 129 65.1
Lj1C4G2 Lonicera japonica HOM05D006057 ORTHO05D007224 5.2e-32 141.4 128 63.3
QL09p037524 Quercus lobata HOM05D006057 ORTHO05D007224 5.2e-32 141.4 133 61.7
COL.COLO4_23092 Corchorus olitorius HOM05D006057 ORTHO05D007224 6.8e-32 141.0 130 60.8
Gohir.D12G122500 Gossypium hirsutum HOM05D006057 ORTHO05D007224 8.9e-32 140.6 137 60.6
Gorai.008G133300 Gossypium raimondii HOM05D006057 ORTHO05D007224 8.9e-32 140.6 137 60.6
Duzib138G1502 Durio zibethinus HOM05D006057 ORTHO05D007224 1.2e-31 140.2 130 60.0
Migut.L00831 Erythranthe guttata HOM05D006057 ORTHO05D007224 2.0e-31 139.4 113 69.9
TAR633G2394 Trochodendron aralioides HOM05D006057 ORTHO05D007224 9.8e-31 137.1 135 60.0
Manes.05G006500 Manihot esculenta HOM05D006057 ORTHO05D007224 1.3e-30 136.7 135 57.8
Migut.L00999 Erythranthe guttata HOM05D006057 ORTHO05D007224 1.7e-30 136.3 104 72.1
SGA_v2.0_scaffold36G14563 Striga asiatica HOM05D006057 ORTHO05D007224 2.9e-30 135.6 118 66.9
Eucgr.A00985 Eucalyptus grandis HOM05D006057 ORTHO05D007224 1.1e-29 133.7 125 60.0
SGA_v2.0_scaffold38G15005 Striga asiatica HOM05D006057 ORTHO05D007224 1.4e-29 133.3 118 66.9
unitig_26.g10007 Utricularia gibba HOM05D006057 ORTHO05D007224 1.4e-29 133.3 121 61.2
CANSAT25G1403 Cannabis sativa HOM05D006057 ORTHO05D007224 1.9e-29 132.9 128 60.9
DCAR_012291 Daucus carota HOM05D006057 ORTHO05D007224 1.9e-29 132.9 134 59.0
DCAR_012292 Daucus carota HOM05D006057 ORTHO05D007224 1.9e-29 132.9 134 58.2
Potri.014G110300 Populus trichocarpa HOM05D006057 ORTHO05D007224 1.9e-29 132.9 127 59.8
Gohir.A12G118700 Gossypium hirsutum HOM05D006057 ORTHO05D007224 2.4e-29 132.5 137 57.7
Medtr1g085440 Medicago truncatula HOM05D006057 ORTHO05D007224 3.2e-29 132.1 119 59.7
arahy.Tifrunner.gnm1.ann1.78VVNS Arachis hypogaea HOM05D006057 ORTHO05D007224 4.1e-29 131.7 124 61.3
arahy.Tifrunner.gnm1.ann1.TF3SPP Arachis hypogaea HOM05D006057 ORTHO05D007224 4.1e-29 131.7 124 61.3
Atru.chr5.830 Acer truncatum HOM05D006057 ORTHO05D007224 1.2e-28 130.2 135 56.3
Cpa.g.sc57.50 Carica papaya HOM05D006057 ORTHO05D007224 2.0e-28 129.4 131 58.0
Medtr4g118050 Medicago truncatula HOM05D006057 ORTHO05D007224 2.0e-28 129.4 119 59.7
TPR.G3097 Trifolium pratense HOM05D006057 ORTHO05D007224 2.7e-28 129.0 119 58.8
Sp6g39640 Schrenkiella parvula HOM05D006057 ORTHO05D007224 3.5e-28 128.6 119 62.2
PGR042G0310 Punica granatum HOM05D006057 ORTHO05D007224 4.6e-28 128.3 129 56.6
BcaB05g21854 Brassica carinata HOM05D006057 ORTHO05D007224 3.9e-27 125.2 121 58.7
BraA02t04741Z Brassica rapa HOM05D006057 ORTHO05D007224 3.9e-27 125.2 121 58.7
ECA238G2998 Erigeron canadensis HOM05D006057 ORTHO05D007224 3.9e-27 125.2 132 56.1
GSVIVG01028268001 Vitis vinifera HOM05D006057 ORTHO05D007224 3.9e-27 125.2 118 61.0
Haze_05170 Corylus avellana HOM05D006057 ORTHO05D007224 5.0e-27 124.8 118 61.9
Ciclev10023548m.g Citrus clementina HOM05D006057 ORTHO05D007224 6.6e-27 124.4 95 68.4
Aa31LG1G21980 Aethionema arabicum HOM05D006057 ORTHO05D007224 8.6e-27 124.0 119 59.7
Medtr1g085355 Medicago truncatula HOM05D006057 ORTHO05D007224 1.5e-26 123.2 120 58.3
Nn4g25242 Nelumbo nucifera HOM05D006057 ORTHO05D007224 1.5e-26 123.2 129 55.8
RcHm_v2.0_Chr2g0148291 Rosa chinensis HOM05D006057 ORTHO05D007224 1.5e-26 123.2 135 53.3
CARHR210270 Cardamine hirsuta HOM05D006057 ORTHO05D007224 1.9e-26 122.9 120 59.2
Lj5g0024678 Lotus japonicus HOM05D006057 ORTHO05D007224 1.9e-26 122.9 126 56.3
TWI14G0531 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 2.5e-26 122.5 125 60.0
BcaC03g13034 Brassica carinata HOM05D006057 ORTHO05D007224 3.3e-26 122.1 121 57.0
BcaC03g13036 Brassica carinata HOM05D006057 ORTHO05D007224 3.3e-26 122.1 121 57.0
MD17G1156700 Malus domestica HOM05D006057 ORTHO05D007224 3.3e-26 122.1 134 53.0
Phvul.007G207500 Phaseolus vulgaris HOM05D006057 ORTHO05D007224 3.3e-26 122.1 125 55.2
Psat6g157560 Pisum sativum HOM05D006057 ORTHO05D007224 3.3e-26 122.1 119 54.6
AL6G12340 Arabidopsis lyrata HOM05D006057 ORTHO05D007224 4.3e-26 121.7 120 59.2
Cc08_g05070 Coffea canephora HOM05D006057 ORTHO05D007224 5.6e-26 121.3 119 60.5
BcaC06g32027 Brassica carinata HOM05D006057 ORTHO05D007224 9.5e-26 120.6 120 55.8
BcaNung04734 Brassica carinata HOM05D006057 ORTHO05D007224 9.5e-26 120.6 120 55.8
BolC9t60103H Brassica oleracea HOM05D006057 ORTHO05D007224 9.5e-26 120.6 120 55.8
BraA10t45317Z Brassica rapa HOM05D006057 ORTHO05D007224 9.5e-26 120.6 126 54.0
Ca_10224_v3 Cicer arietinum L. HOM05D006057 ORTHO05D007224 9.5e-26 120.6 119 55.5
Prupe.3G028700 Prunus persica HOM05D006057 ORTHO05D007224 9.5e-26 120.6 134 55.2
BcaC06g32028 Brassica carinata HOM05D006057 ORTHO05D007224 1.2e-25 120.2 125 56.0
AT5G03050 Arabidopsis thaliana HOM05D006057 ORTHO05D007224 2.1e-25 119.4 120 58.3
C02p00760 Brassica napus HOM05D006057 ORTHO05D007224 2.1e-25 119.4 121 57.9
BolC2t06074H Brassica oleracea HOM05D006057 ORTHO05D007224 2.1e-25 119.4 121 57.9
FvH4_6g36280 Fragaria vesca HOM05D006057 ORTHO05D007224 2.1e-25 119.4 130 56.2
C09p73700 Brassica napus HOM05D006057 ORTHO05D007224 2.8e-25 119.0 120 55.8
BolC9t60100H Brassica oleracea HOM05D006057 ORTHO05D007224 2.8e-25 119.0 120 55.8
Glyma.10G140400 Glycine max HOM05D006057 ORTHO05D007224 2.8e-25 119.0 117 59.0
Gohir.A07G132650 Gossypium hirsutum HOM05D006057 ORTHO05D007224 2.8e-25 119.0 101 65.3
Thhalv10015298m.g Eutrema salsugineum HOM05D006057 ORTHO05D007224 3.6e-25 118.6 119 56.3
Sed0018142 Sechium edule HOM05D006057 ORTHO05D007224 3.6e-25 118.6 129 53.5
BcaNung05509 Brassica carinata HOM05D006057 ORTHO05D007224 4.7e-25 118.2 119 56.3
TWI59G0504 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 4.7e-25 118.2 124 58.1
Sabra02G0131200 Salix brachista HOM05D006057 ORTHO05D007224 6.2e-25 117.9 109 61.5
HanXRQChr07g0194641 Helianthus annuus HOM05D006057 ORTHO05D007224 8.1e-25 117.5 132 53.0
Actinidia21332 Actinidia chinensis HOM05D006057 ORTHO05D007224 1.1e-24 117.1 137 52.6
Lsat_1_v5_gn_2_108401 Lactuca sativa HOM05D006057 ORTHO05D007224 1.1e-24 117.1 124 56.5
MBI18_g03875_MAGBIO Magnolia biondii HOM05D006057 ORTHO05D007224 1.1e-24 117.1 134 51.5
SHI19776 Sapria himalayana HOM05D006057 ORTHO05D007224 1.1e-24 117.1 98 62.2
Carub.0006s0184 Capsella rubella HOM05D006057 ORTHO05D007224 3.1e-24 115.5 120 56.7
VMungo0720G1137 Vigna mungo HOM05D006057 ORTHO05D007224 3.1e-24 115.5 118 55.9
ClCG10G013240 Citrullus lanatus HOM05D006057 ORTHO05D007224 5.2e-24 114.8 129 55.0
CsaV3_3G043390 Cucumis sativus L. HOM05D006057 ORTHO05D007224 8.9e-24 114.0 131 53.4
Aqoxy5G02874 Aquilegia oxysepala HOM05D006057 ORTHO05D007224 3.4e-23 112.1 134 48.5
Lalb_Chr02g0147311 Lupinus albus HOM05D006057 ORTHO05D007224 3.4e-23 112.1 116 56.0
CDE01G0754 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 4.4e-23 111.7 124 52.4
MELO3C026900.2 Cucumis melo HOM05D006057 ORTHO05D007224 5.8e-23 111.3 129 53.5
Sc09g0000780 Simmondsia chinensis HOM05D006057 ORTHO05D007224 5.8e-23 111.3 123 52.8
PSO170G4276 Papaver somniferum HOM05D006057 ORTHO05D007224 9.8e-23 110.5 130 50.8
Glyma.20G089200 Glycine max HOM05D006057 ORTHO05D007224 4.1e-21 105.1 141 48.9
PSO339G1810 Papaver somniferum HOM05D006057 ORTHO05D007224 4.1e-21 105.1 124 52.4
EL10Ac4g10232 Beta vulgaris HOM05D006057 ORTHO05D007224 7.1e-21 104.4 86 61.6
Hund22023 Selenicereus undatus HOM05D006057 ORTHO05D007224 9.2e-21 104.0 126 49.2
Ah.04g162100 Amaranthus hybridus HOM05D006057 ORTHO05D007224 3.5e-20 102.1 129 48.8
PSO081G0045 Papaver somniferum HOM05D006057 ORTHO05D007224 1.0e-19 100.5 128 49.2
AUR62000136 Chenopodium quinoa HOM05D006057 ORTHO05D007224 1.7e-19 99.8 96 54.2
HPP92_026861 Vanilla planifolia HOM05D006057 ORTHO05D007224 1.7e-19 99.8 130 46.9
Ah.06g194050 Amaranthus hybridus HOM05D006057 ORTHO05D007224 3.0e-19 99.0 117 49.6
AUR62019316 Chenopodium quinoa HOM05D006057 ORTHO05D007224 8.6e-19 97.4 86 55.8
CDE12G0816 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 7.3e-18 94.4 73 68.5
Potri.002G184600 Populus trichocarpa HOM05D006057 ORTHO05D007224 1.6e-17 93.2 100 56.0
Gorai.001G149000 Gossypium raimondii HOM05D006057 ORTHO05D007224 4.7e-17 91.7 64 73.4
ATR0019G040 Amborella trichopoda HOM05D006057 ORTHO05D007224 1.4e-16 90.1 103 49.5
Dinv05504 Davidia involucrata HOM05D006057 ORTHO05D007224 6.8e-16 87.8 89 58.4
Gohir.D07G136950 Gossypium hirsutum HOM05D006057 ORTHO05D007224 6.8e-16 87.8 64 73.4
SEGI_31615 Sequoiadendron giganteum HOM05D006057 ORTHO05D007224 7.6e-15 84.3 117 44.4
BcaNung05508 Brassica carinata HOM05D006057 ORTHO05D007224 5.4e-13 78.2 112 41.1
SMO361G0765 Selaginella moellendorffii HOM05D006057 ORTHO05D007224 2.1e-12 76.3 86 48.8
CiPaw.07G127700 Carya illinoinensis HOM05D006057 ORTHO05D007224 3.5e-12 75.5 118 46.6
Zm00001eb000680 Zea mays HOM05D006057 ORTHO05D007224 7.8e-12 74.3 111 39.6
Os03g0108700 Oryza sativa ssp. japonica HOM05D006057 ORTHO05D007224 1.3e-11 73.6 86 45.3
TPR.G3076 Trifolium pratense HOM05D006057 ORTHO05D007224 2.3e-11 72.8 83 49.4
Pp3c25_8550 Physcomitrium patens HOM05D006057 ORTHO05D007224 1.6e-09 66.6 102 41.2
CBR_g39249 Chara braunii HOM05D006057 ORTHO05D007224 1.5e-07 60.1 113 38.1


User provided reference genes

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